RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 MSCO60682 206 aa21.28■■□□□ 1
COPS7A-216ENST00000543170 CCND3P30281 292 aaPredicted RBP21.28■■□□□ 1
COPS7A-216ENST00000543170 FUT2Q10981 343 aa21.28■■□□□ 1
COPS7A-216ENST00000543170 DNERQ8NFT8 737 aa21.28■■□□□ 1
COPS7A-216ENST00000543170 U2AF1L4Q8WU68 220 aaKnown RBP21.28■■□□□ 1
COPS7A-216ENST00000543170 CRISPLD2Q9H0B8 497 aa21.28■■□□□ 1
COPS7A-216ENST00000543170 ADD3Q9UEY8 706 aaKnown RBP21.28■■□□□ 1
COPS7A-216ENST00000543170 ASTN1O14525 1302 aa21.28■■□□□ 1
COPS7A-216ENST00000543170 OPLAHO14841 1288 aa21.27■■□□□ 1
COPS7A-216ENST00000543170 SGPL1O95470 568 aa21.27■■□□□ 1
COPS7A-216ENST00000543170 CDC27P30260 824 aa21.27■■□□□ 1
COPS7A-216ENST00000543170 ARMCX2Q7L311 632 aa21.27■■□□□ 1
COPS7A-216ENST00000543170 CMTR1Q8N1G2 835 aaKnown RBP21.27■■□□□ 1
COPS7A-216ENST00000543170 TRPV1Q8NER1 839 aa21.27■■□□□ 1
COPS7A-216ENST00000543170 MORC4Q8TE76 937 aa21.27■■□□□ 1
COPS7A-216ENST00000543170 SHISA4Q96DD7 197 aa21.27■■□□□ 1
COPS7A-216ENST00000543170 ZNF274Q96GC6 653 aaPredicted RBP21.27■■□□□ 1
COPS7A-216ENST00000543170 DEFB118Q96PH6 123 aa21.27■■□□□ 1
COPS7A-216ENST00000543170 NAP1L2Q9ULW6 460 aaPredicted RBP21.27■■□□□ 1
COPS7A-216ENST00000543170 CNPY2Q9Y2B0 182 aa21.27■■□□□ 1
COPS7A-216ENST00000543170 SEPT4O43236 478 aa21.26■□□□□ 0.99
COPS7A-216ENST00000543170 PDIA3P30101 505 aaKnown RBP21.26■□□□□ 0.99
COPS7A-216ENST00000543170 RBM25P49756 843 aaKnown RBP21.26■□□□□ 0.99
COPS7A-216ENST00000543170 HSD17B4P51659 736 aa21.26■□□□□ 0.99
COPS7A-216ENST00000543170 ANKRD1Q15327 319 aa21.26■□□□□ 0.99
COPS7A-216ENST00000543170 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.26■□□□□ 0.99
COPS7A-216ENST00000543170 DDX20Q9UHI6 824 aaKnown RBP21.26■□□□□ 0.99
COPS7A-216ENST00000543170 hCG_1984214I3L0E3 225 aa21.25■□□□□ 0.99
COPS7A-216ENST00000543170 SNAI1O95863 264 aaPredicted RBP21.25■□□□□ 0.99
COPS7A-216ENST00000543170 CALML3P27482 149 aa21.25■□□□□ 0.99
COPS7A-216ENST00000543170 ALDH5A1P51649 535 aaPredicted RBP21.25■□□□□ 0.99
COPS7A-216ENST00000543170 ZNF713Q8N859 430 aaPredicted RBP21.25■□□□□ 0.99
COPS7A-216ENST00000543170 SYTL5Q8TDW5 730 aaPredicted RBP21.25■□□□□ 0.99
COPS7A-216ENST00000543170 ABHD16BQ9H3Z7 469 aa21.25■□□□□ 0.99
COPS7A-216ENST00000543170 RBM27Q9P2N5 1060 aaKnown RBP21.25■□□□□ 0.99
COPS7A-216ENST00000543170 ZNF865P0CJ78 1059 aaPredicted RBP21.24■□□□□ 0.99
COPS7A-216ENST00000543170 EN2P19622 333 aaPredicted RBP21.24■□□□□ 0.99
COPS7A-216ENST00000543170 EDNRBP24530 442 aa21.24■□□□□ 0.99
COPS7A-216ENST00000543170 ADD1P35611 737 aaKnown RBP21.24■□□□□ 0.99
COPS7A-216ENST00000543170 LHX8Q68G74 356 aa21.24■□□□□ 0.99
COPS7A-216ENST00000543170 CCDC82Q8N4S0 544 aa21.24■□□□□ 0.99
COPS7A-216ENST00000543170 PIBF1Q8WXW3 757 aa21.24■□□□□ 0.99
COPS7A-216ENST00000543170 MPHOSPH6Q99547 160 aaKnown RBP21.24■□□□□ 0.99
COPS7A-216ENST00000543170 C22orf23Q9BZE7 217 aa21.24■□□□□ 0.99
COPS7A-216ENST00000543170 KATNBL1Q9H079 304 aa21.24■□□□□ 0.99
COPS7A-216ENST00000543170 UPF2Q9HAU5 1272 aaKnown RBP21.24■□□□□ 0.99
COPS7A-216ENST00000543170 OGDHLQ9ULD0 1010 aa21.24■□□□□ 0.99
COPS7A-216ENST00000543170 B4DLN1 442 aa21.23■□□□□ 0.99
COPS7A-216ENST00000543170 CFBP00751 764 aa21.23■□□□□ 0.99
COPS7A-216ENST00000543170 AKR1A1P14550 325 aa21.23■□□□□ 0.99
COPS7A-216ENST00000543170 MRPL12P52815 198 aaKnown RBP21.23■□□□□ 0.99
COPS7A-216ENST00000543170 TEX2Q8IWB9 1127 aa21.23■□□□□ 0.99
COPS7A-216ENST00000543170 ANKLE1Q8NAG6 615 aa21.23■□□□□ 0.99
COPS7A-216ENST00000543170 TBC1D5Q92609 795 aa21.23■□□□□ 0.99
COPS7A-216ENST00000543170 PURBQ96QR8 312 aaKnown RBP21.23■□□□□ 0.99
COPS7A-216ENST00000543170 IFNAR1P17181 557 aa21.22■□□□□ 0.99
COPS7A-216ENST00000543170 CNGA1P29973 690 aa21.22■□□□□ 0.99
COPS7A-216ENST00000543170 AK2P54819 239 aa21.22■□□□□ 0.99
COPS7A-216ENST00000543170 ACVR2BQ13705 512 aa21.22■□□□□ 0.99
COPS7A-216ENST00000543170 NTRK3Q16288 839 aa21.22■□□□□ 0.99
COPS7A-216ENST00000543170 PRAMEF19Q5SWL8 479 aa21.22■□□□□ 0.99
COPS7A-216ENST00000543170 PPP1R18Q6NYC8 613 aa21.22■□□□□ 0.99
COPS7A-216ENST00000543170 COL20A1Q9P218 1284 aa21.22■□□□□ 0.99
COPS7A-216ENST00000543170 GCOM1H8Y6P7 765 aaPredicted RBP21.21■□□□□ 0.99
COPS7A-216ENST00000543170 POLR2MP0CAP2 368 aa21.21■□□□□ 0.99
COPS7A-216ENST00000543170 NSUN6Q8TEA1 469 aaKnown RBP21.21■□□□□ 0.99
COPS7A-216ENST00000543170 RNF26Q9BY78 433 aaPredicted RBP21.21■□□□□ 0.99
COPS7A-216ENST00000543170 VTA1Q9NP79 307 aa21.21■□□□□ 0.99
COPS7A-216ENST00000543170 ZHX1Q9UKY1 873 aaPredicted RBP21.21■□□□□ 0.99
COPS7A-216ENST00000543170 hCG_1642624A0A1W2PR95 340 aa21.2■□□□□ 0.98
COPS7A-216ENST00000543170 PIK3CDO00329 1044 aa21.2■□□□□ 0.98
COPS7A-216ENST00000543170 TFRCP02786 760 aaKnown RBP21.2■□□□□ 0.98
COPS7A-216ENST00000543170 NEK4P51957 841 aa21.2■□□□□ 0.98
COPS7A-216ENST00000543170 PFKFB3Q16875 520 aaPredicted RBP21.2■□□□□ 0.98
COPS7A-216ENST00000543170 WWC2Q6AWC2 1192 aa21.2■□□□□ 0.98
COPS7A-216ENST00000543170 UBE2Q1Q7Z7E8 422 aa21.2■□□□□ 0.98
COPS7A-216ENST00000543170 IL27Q8NEV9 243 aa21.2■□□□□ 0.98
COPS7A-216ENST00000543170 IWS1Q96ST2 819 aa21.2■□□□□ 0.98
COPS7A-216ENST00000543170 KIF2CQ99661 725 aa21.2■□□□□ 0.98
COPS7A-216ENST00000543170 FAM184BQ9ULE4 1060 aa21.2■□□□□ 0.98
COPS7A-216ENST00000543170 V9GY48 417 aaPredicted RBP21.2■□□□□ 0.98
COPS7A-216ENST00000543170 PRPF3O43395 683 aaKnown RBP21.19■□□□□ 0.98
COPS7A-216ENST00000543170 CCT2P78371 535 aaKnown RBP21.19■□□□□ 0.98
COPS7A-216ENST00000543170 HEATR3Q7Z4Q2 680 aa21.19■□□□□ 0.98
COPS7A-216ENST00000543170 TAAR1Q96RJ0 339 aa21.19■□□□□ 0.98
COPS7A-216ENST00000543170 RMDN3Q96TC7 470 aa21.19■□□□□ 0.98
COPS7A-216ENST00000543170 NCOA5Q9HCD5 579 aaKnown RBP21.19■□□□□ 0.98
COPS7A-216ENST00000543170 PXMP2Q9NR77 195 aa21.19■□□□□ 0.98
COPS7A-216ENST00000543170 BARHL2Q9NY43 387 aa21.19■□□□□ 0.98
COPS7A-216ENST00000543170 TPCN1Q9ULQ1 816 aa21.19■□□□□ 0.98
COPS7A-216ENST00000543170 FRMPD4Q14CM0 1322 aa21.19■□□□□ 0.98
COPS7A-216ENST00000543170 FARP2O94887 1054 aaPredicted RBP21.18■□□□□ 0.98
COPS7A-216ENST00000543170 RARBP10826 455 aa21.18■□□□□ 0.98
COPS7A-216ENST00000543170 CPLX2Q6PUV4 134 aaKnown RBP21.18■□□□□ 0.98
COPS7A-216ENST00000543170 GPKOWQ92917 476 aaPredicted RBP eCLIP21.18■□□□□ 0.98
COPS7A-216ENST00000543170 CUL5Q93034 780 aa21.18■□□□□ 0.98
COPS7A-216ENST00000543170 SLKQ9H2G2 1235 aaPredicted RBP21.18■□□□□ 0.98
COPS7A-216ENST00000543170 KIAA1217Q5T5P2 1943 aa21.17■□□□□ 0.98
COPS7A-216ENST00000543170 STXBP3O00186 592 aa21.17■□□□□ 0.98
COPS7A-216ENST00000543170 MEIS2O14770 477 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms