RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 DUSP28Q4G0W2 176 aa20.47■□□□□ 0.87
PPP1CA-210ENST00000542876 AKNAD1Q5T1N1 836 aa20.47■□□□□ 0.87
PPP1CA-210ENST00000542876 RNF207Q6ZRF8 634 aa20.47■□□□□ 0.87
PPP1CA-210ENST00000542876 ZNF589Q86UQ0 364 aaPredicted RBP20.47■□□□□ 0.87
PPP1CA-210ENST00000542876 WDR11Q9BZH6 1224 aa20.47■□□□□ 0.87
PPP1CA-210ENST00000542876 LNPKQ9C0E8 428 aa20.47■□□□□ 0.87
PPP1CA-210ENST00000542876 PTGS1P23219 599 aa20.46■□□□□ 0.87
PPP1CA-210ENST00000542876 CPT1AP50416 773 aa20.46■□□□□ 0.87
PPP1CA-210ENST00000542876 PSMC6P62333 389 aa20.46■□□□□ 0.87
PPP1CA-210ENST00000542876 AAMPQ13685 434 aa20.46■□□□□ 0.87
PPP1CA-210ENST00000542876 BRDTQ58F21 947 aaPredicted RBP20.46■□□□□ 0.87
PPP1CA-210ENST00000542876 RASIP1Q5U651 963 aa20.46■□□□□ 0.87
PPP1CA-210ENST00000542876 ESR2Q92731 530 aa20.46■□□□□ 0.87
PPP1CA-210ENST00000542876 GAS2L1Q99501 681 aaPredicted RBP20.46■□□□□ 0.87
PPP1CA-210ENST00000542876 PBX4Q9BYU1 374 aa20.46■□□□□ 0.87
PPP1CA-210ENST00000542876 TRPV6Q9H1D0 765 aa20.46■□□□□ 0.87
PPP1CA-210ENST00000542876 GPHNQ9NQX3 736 aaPredicted RBP20.46■□□□□ 0.87
PPP1CA-210ENST00000542876 POLR3EQ9NVU0 708 aa20.46■□□□□ 0.87
PPP1CA-210ENST00000542876 MSRAQ9UJ68 235 aa20.46■□□□□ 0.87
PPP1CA-210ENST00000542876 GRXCR1A8MXD5 290 aa20.45■□□□□ 0.86
PPP1CA-210ENST00000542876 B4DLN1 442 aa20.45■□□□□ 0.86
PPP1CA-210ENST00000542876 MRPL12P52815 198 aaKnown RBP20.45■□□□□ 0.86
PPP1CA-210ENST00000542876 CCL23P55773 120 aa20.45■□□□□ 0.86
PPP1CA-210ENST00000542876 PDE4DQ08499 809 aa20.45■□□□□ 0.86
PPP1CA-210ENST00000542876 ZNF543Q08ER8 600 aa20.45■□□□□ 0.86
PPP1CA-210ENST00000542876 RAB30Q15771 203 aa20.45■□□□□ 0.86
PPP1CA-210ENST00000542876 RPUSD2Q8IZ73 545 aaKnown RBP20.45■□□□□ 0.86
PPP1CA-210ENST00000542876 HERVK_113Q902F9 699 aa20.45■□□□□ 0.86
PPP1CA-210ENST00000542876 RWDD1Q9H446 243 aaPredicted RBP20.45■□□□□ 0.86
PPP1CA-210ENST00000542876 EYSQ5T1H1 3165 aa20.45■□□□□ 0.86
PPP1CA-210ENST00000542876 B4GALT4O60513 344 aa20.44■□□□□ 0.86
PPP1CA-210ENST00000542876 SUPT20HL2P0C7V6 817 aa20.44■□□□□ 0.86
PPP1CA-210ENST00000542876 PBX2P40425 430 aa20.44■□□□□ 0.86
PPP1CA-210ENST00000542876 TMEM63BQ5T3F8 832 aa20.44■□□□□ 0.86
PPP1CA-210ENST00000542876 GPATCH4Q5T3I0 446 aaKnown RBP20.44■□□□□ 0.86
PPP1CA-210ENST00000542876 SLC30A10Q6XR72 485 aa20.44■□□□□ 0.86
PPP1CA-210ENST00000542876 OR6J1Q8NGC5 347 aa20.44■□□□□ 0.86
PPP1CA-210ENST00000542876 NOC4LQ9BVI4 516 aaKnown RBP20.44■□□□□ 0.86
PPP1CA-210ENST00000542876 GRIN2DO15399 1336 aa20.44■□□□□ 0.86
PPP1CA-210ENST00000542876 WDR19Q8NEZ3 1342 aa20.44■□□□□ 0.86
PPP1CA-210ENST00000542876 RAD50Q92878 1312 aa20.44■□□□□ 0.86
PPP1CA-210ENST00000542876 VCANP13611 3396 aa20.43■□□□□ 0.86
PPP1CA-210ENST00000542876 ZNF213O14771 459 aa20.43■□□□□ 0.86
PPP1CA-210ENST00000542876 MYL3P08590 195 aa20.43■□□□□ 0.86
PPP1CA-210ENST00000542876 SDSP20132 328 aa20.43■□□□□ 0.86
PPP1CA-210ENST00000542876 NT5C2P49902 561 aa20.43■□□□□ 0.86
PPP1CA-210ENST00000542876 PPP2R5BQ15173 497 aa20.43■□□□□ 0.86
PPP1CA-210ENST00000542876 CCDC178Q5BJE1 867 aa20.43■□□□□ 0.86
PPP1CA-210ENST00000542876 B4GALNT3Q6L9W6 998 aa20.43■□□□□ 0.86
PPP1CA-210ENST00000542876 OTOP2Q7RTS6 562 aa20.43■□□□□ 0.86
PPP1CA-210ENST00000542876 CLEC4DQ8WXI8 215 aa20.43■□□□□ 0.86
PPP1CA-210ENST00000542876 SYMPKQ92797 1274 aaKnown RBP20.43■□□□□ 0.86
PPP1CA-210ENST00000542876 ALDH8A1Q9H2A2 487 aaPredicted RBP20.43■□□□□ 0.86
PPP1CA-210ENST00000542876 UMODL1Q5DID0 1318 aa20.43■□□□□ 0.86
PPP1CA-210ENST00000542876 NKRFO15226 690 aaKnown RBP eCLIP20.42■□□□□ 0.86
PPP1CA-210ENST00000542876 SNHG28P0DPA3 235 aa20.42■□□□□ 0.86
PPP1CA-210ENST00000542876 RPS6P62753 249 aaKnown RBP20.42■□□□□ 0.86
PPP1CA-210ENST00000542876 IQCA1Q86XH1 822 aa20.42■□□□□ 0.86
PPP1CA-210ENST00000542876 TBC1D10CQ8IV04 446 aa20.42■□□□□ 0.86
PPP1CA-210ENST00000542876 DNERQ8NFT8 737 aa20.42■□□□□ 0.86
PPP1CA-210ENST00000542876 SCFD2Q8WU76 684 aa20.42■□□□□ 0.86
PPP1CA-210ENST00000542876 MTG1Q9BT17 334 aaPredicted RBP20.42■□□□□ 0.86
PPP1CA-210ENST00000542876 RBM47A0AV96 593 aaKnown RBP20.41■□□□□ 0.86
PPP1CA-210ENST00000542876 PURAQ00577 322 aaKnown RBP20.41■□□□□ 0.86
PPP1CA-210ENST00000542876 USH1GQ495M9 461 aa20.41■□□□□ 0.86
PPP1CA-210ENST00000542876 FAM47CQ5HY64 1035 aa20.41■□□□□ 0.86
PPP1CA-210ENST00000542876 DGKHQ86XP1 1220 aa20.41■□□□□ 0.86
PPP1CA-210ENST00000542876 ZKSCAN3Q9BRR0 538 aa20.41■□□□□ 0.86
PPP1CA-210ENST00000542876 SLC28A3Q9HAS3 691 aa20.41■□□□□ 0.86
PPP1CA-210ENST00000542876 DIAPH3Q9NSV4 1193 aa20.41■□□□□ 0.86
PPP1CA-210ENST00000542876 CXXC1Q9P0U4 656 aaPredicted RBP20.41■□□□□ 0.86
PPP1CA-210ENST00000542876 LRRC37A2A6NM11 1700 aa20.4■□□□□ 0.86
PPP1CA-210ENST00000542876 KPNA6O60684 536 aa20.4■□□□□ 0.86
PPP1CA-210ENST00000542876 GOLGA8HP0CJ92 632 aa20.4■□□□□ 0.86
PPP1CA-210ENST00000542876 CHD1LQ86WJ1 897 aa20.4■□□□□ 0.86
PPP1CA-210ENST00000542876 SMC5Q8IY18 1101 aa20.4■□□□□ 0.86
PPP1CA-210ENST00000542876 WNT8AQ9H1J5 351 aa20.4■□□□□ 0.86
PPP1CA-210ENST00000542876 PRDM12Q9H4Q4 367 aa20.4■□□□□ 0.86
PPP1CA-210ENST00000542876 KAT14Q9H8E8 782 aa20.4■□□□□ 0.86
PPP1CA-210ENST00000542876 TRMT13Q9NUP7 481 aaKnown RBP20.4■□□□□ 0.86
PPP1CA-210ENST00000542876 SLC4A7Q9Y6M7 1214 aa20.4■□□□□ 0.86
PPP1CA-210ENST00000542876 TNKSO95271 1327 aa20.39■□□□□ 0.85
PPP1CA-210ENST00000542876 NEDD4P46934 1319 aa20.39■□□□□ 0.85
PPP1CA-210ENST00000542876 ZBBXA8MT70 800 aa20.39■□□□□ 0.85
PPP1CA-210ENST00000542876 HIP1O00291 1037 aa20.39■□□□□ 0.85
PPP1CA-210ENST00000542876 PFKMP08237 780 aa20.39■□□□□ 0.85
PPP1CA-210ENST00000542876 CWC27Q6UX04 472 aaKnown RBP20.39■□□□□ 0.85
PPP1CA-210ENST00000542876 PNMA1Q8ND90 353 aa20.39■□□□□ 0.85
PPP1CA-210ENST00000542876 RGS22Q8NE09 1264 aa20.39■□□□□ 0.85
PPP1CA-210ENST00000542876 PPM1EQ8WY54 764 aa20.39■□□□□ 0.85
PPP1CA-210ENST00000542876 SCLYQ96I15 445 aa20.39■□□□□ 0.85
PPP1CA-210ENST00000542876 PRUNE2Q8WUY3 3088 aa20.39■□□□□ 0.85
PPP1CA-210ENST00000542876 KDM4AO75164 1064 aa20.38■□□□□ 0.85
PPP1CA-210ENST00000542876 TXNP10599 105 aaKnown RBP20.38■□□□□ 0.85
PPP1CA-210ENST00000542876 EDNRBP24530 442 aa20.38■□□□□ 0.85
PPP1CA-210ENST00000542876 TTLL4Q14679 1199 aa20.38■□□□□ 0.85
PPP1CA-210ENST00000542876 UBA5Q9GZZ9 404 aa20.38■□□□□ 0.85
PPP1CA-210ENST00000542876 NKX2-4Q9H2Z4 354 aa20.38■□□□□ 0.85
PPP1CA-210ENST00000542876 OSBPL3Q9H4L5 887 aa20.38■□□□□ 0.85
PPP1CA-210ENST00000542876 DHX16O60231 1041 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms