RNA–Protein interactions for RNA: ENST00000542846.5

LRTOMT-220, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 5

Gene LRTOMT, Length 527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-220ENST00000542846 NUP133Q8WUM0 1156 aa7.28□□□□□ -1.24
LRTOMT-220ENST00000542846 PURBQ96QR8 312 aaKnown RBP7.28□□□□□ -1.24
LRTOMT-220ENST00000542846 PIGSQ96S52 555 aa7.28□□□□□ -1.24
LRTOMT-220ENST00000542846 MPHOSPH6Q99547 160 aaKnown RBP7.28□□□□□ -1.24
LRTOMT-220ENST00000542846 LZTS2Q9BRK4 669 aa7.28□□□□□ -1.24
LRTOMT-220ENST00000542846 MYL10Q9BUA6 226 aa7.28□□□□□ -1.24
LRTOMT-220ENST00000542846 SPZ1Q9BXG8 430 aa7.28□□□□□ -1.24
LRTOMT-220ENST00000542846 LRRC2Q9BYS8 371 aa7.28□□□□□ -1.24
LRTOMT-220ENST00000542846 VTA1Q9NP79 307 aa7.28□□□□□ -1.24
LRTOMT-220ENST00000542846 SYNRGQ9UMZ2 1314 aa7.27□□□□□ -1.24
LRTOMT-220ENST00000542846 CEP290O15078 2479 aa7.27□□□□□ -1.24
LRTOMT-220ENST00000542846 KIAA1217Q5T5P2 1943 aa7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 PNMA6FA0A0J9YX94 578 aa7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 B4DLN1 442 aa7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 H0YGN5 161 aa7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 OPLAHO14841 1288 aa7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 ADCY6O43306 1168 aa7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 PGK1P00558 417 aa7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 CST5P28325 142 aaPredicted RBP7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 HSD17B4P51659 736 aa7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 MRPL12P52815 198 aaKnown RBP7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 GJA9P57773 515 aa7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 NKX3-2P78367 333 aa7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 LRRC26Q2I0M4 334 aa7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 TAPT1Q6NXT6 567 aa7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 FBXO16Q8IX29 292 aaPredicted RBP7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 SAMD3Q8N6K7 520 aa7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 KLHDC9Q8NEP7 349 aa7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 SYTL5Q8TDW5 730 aaPredicted RBP7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 TBC1D5Q92609 795 aa7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 LENG1Q96BZ8 264 aaPredicted RBP7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 TSEN34Q9BSV6 310 aaKnown RBP7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 SENP6Q9GZR1 1112 aaPredicted RBP7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 UPF3AQ9H1J1 476 aaKnown RBP7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 MAP3K20Q9NYL2 800 aaKnown RBP7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 COL20A1Q9P218 1284 aa7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 PHF24Q9UPV7 400 aa7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 PCDHA1Q9Y5I3 950 aa7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 SNX14Q9Y5W7 946 aa7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 SLC12A7Q9Y666 1083 aa7.27□□□□□ -1.25
LRTOMT-220ENST00000542846 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 RBM47A0AV96 593 aaKnown RBP7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 MOXD2PA6NHM9 499 aa7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 PLEKHA8P1O95397 391 aa7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 MYCNP04198 464 aaPredicted RBP7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 RXRAP19793 462 aa7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 ADCYAP1R1P41586 468 aa7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 RCAN1P53805 252 aa7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 TNFAIP2Q03169 654 aa7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 PDE4DQ08499 809 aa7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 SNX17Q15036 470 aa7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 C1orf53Q5VUE5 145 aa7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 IQSEC1Q6DN90 963 aa7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 CCSAPQ6IQ19 270 aaPredicted RBP7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 APOA5Q6Q788 366 aa7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 BLOC1S2Q6QNY1 142 aa7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 SYNE3Q6ZMZ3 975 aa7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 TMTC3Q6ZXV5 915 aa7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 EEPD1Q7L9B9 569 aa7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 MICU3Q86XE3 530 aa7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 C7orf61Q8IZ16 206 aa7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 SRBD1Q8N5C6 995 aaKnown RBP7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 FANCBQ8NB91 859 aa7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 NSUN6Q8TEA1 469 aaKnown RBP7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 RRP36Q96EU6 259 aaKnown RBP7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 TCEANC2Q96MN5 208 aa7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 JAKMIP1Q96N16 626 aaKnown RBP7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 SPC25Q9HBM1 224 aa7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 PDGFCQ9NRA1 345 aa7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 RBM28Q9NW13 759 aaKnown RBP7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 GNEQ9Y223 722 aaKnown RBP7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 Q9Y3F1 56 aa7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 DDX49Q9Y6V7 483 aaKnown RBP7.26□□□□□ -1.25
LRTOMT-220ENST00000542846 LTBP2Q14767 1821 aa7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 NID2Q14112 1375 aa7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 RANBP2P49792 3224 aaKnown RBP7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 KLF18A0A0U1RQI7 1052 aa7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 A0A1W2PQ45 241 aaPredicted RBP7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 A0A1W2PQY0 241 aa7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 MYADML2A6NDP7 307 aa7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 CTAGE5O15320 804 aa7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 ZBTB43O43298 467 aa7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 CFBP00751 764 aa7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 C6orf222P0C671 652 aaPredicted RBP7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 SMPD1P17405 629 aa7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 RPS6KB1P23443 525 aa7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 PSMA5P28066 241 aa7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 ACLYP53396 1101 aa7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 ATN1P54259 1190 aaPredicted RBP7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 RTP1P59025 263 aa7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 RTN1Q16799 776 aa7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 DUSP28Q4G0W2 176 aa7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 SLC39A5Q6ZMH5 540 aa7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 Q6ZUG5 572 aa7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 TLK2Q86UE8 772 aa7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 RAB11FIP4Q86YS3 637 aa7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 FBXL16Q8N461 479 aa7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 PCSK9Q8NBP7 692 aaKnown RBP7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 SCFD2Q8WU76 684 aa7.25□□□□□ -1.25
LRTOMT-220ENST00000542846 FERMT2Q96AC1 680 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms