RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 GLT8D2Q9H1C3 349 aa15.97■□□□□ 0.15
LDB3-207ENST00000542786 BLOC1S4Q9NUP1 217 aa15.97■□□□□ 0.15
LDB3-207ENST00000542786 TMOD2Q9NZR1 351 aa15.97■□□□□ 0.15
LDB3-207ENST00000542786 ADD3Q9UEY8 706 aaKnown RBP15.97■□□□□ 0.15
LDB3-207ENST00000542786 HDAC9Q9UKV0 1011 aa15.97■□□□□ 0.15
LDB3-207ENST00000542786 MEIS2O14770 477 aa15.96■□□□□ 0.15
LDB3-207ENST00000542786 PRCPP42785 496 aa15.96■□□□□ 0.15
LDB3-207ENST00000542786 CXCL9Q07325 125 aa15.96■□□□□ 0.15
LDB3-207ENST00000542786 E4F1Q66K89 784 aaPredicted RBP15.96■□□□□ 0.15
LDB3-207ENST00000542786 NYAP1Q6ZVC0 841 aa15.96■□□□□ 0.15
LDB3-207ENST00000542786 TMEM139Q8IV31 216 aa15.96■□□□□ 0.15
LDB3-207ENST00000542786 NIM1KQ8IY84 436 aa15.96■□□□□ 0.15
LDB3-207ENST00000542786 TRIM9Q9C026 710 aa15.96■□□□□ 0.15
LDB3-207ENST00000542786 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.96■□□□□ 0.15
LDB3-207ENST00000542786 PCDHA1Q9Y5I3 950 aa15.96■□□□□ 0.15
LDB3-207ENST00000542786 CYP3A7-CYP3A51PA0A087WV96 503 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 USP17L15C9J2P7 530 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 USP17L13C9JLJ4 530 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 USP17L11C9JVI0 530 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 USP17L18D6R9N7 530 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 USP17L22D6RA61 530 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 USP17L17D6RBQ6 530 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 USP17L19D6RCP7 530 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 USP17L20D6RJB6 530 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 OPLAHO14841 1288 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 TBC1D12O60347 775 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 BMP3P12645 472 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 GCFC2P16383 781 aaKnown RBP15.95■□□□□ 0.14
LDB3-207ENST00000542786 CYP3A7P24462 503 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 TXKP42681 527 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 MAP3K10Q02779 954 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 USP17L24Q0WX57 530 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 PAK1Q13153 545 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 PDIA5Q14554 519 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 USP17L6PQ6QN14 398 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 GIMAP8Q8ND71 665 aaPredicted RBP15.95■□□□□ 0.14
LDB3-207ENST00000542786 NELFBQ8WX92 580 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 LRRC10BA6NIK2 292 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 TMEM119Q4V9L6 283 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 FAM83AQ86UY5 434 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 MYRIPQ8NFW9 859 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 ACER1Q8TDN7 264 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 NUDT12Q9BQG2 462 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 PIM2Q9P1W9 311 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 LIMA1Q9UHB6 759 aaKnown RBP15.95■□□□□ 0.14
LDB3-207ENST00000542786 ZBTB21Q9ULJ3 1066 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 TMX2Q9Y320 296 aa15.95■□□□□ 0.14
LDB3-207ENST00000542786 CDK11BP21127 795 aaKnown RBP15.94■□□□□ 0.14
LDB3-207ENST00000542786 SNAP25P60880 206 aa15.94■□□□□ 0.14
LDB3-207ENST00000542786 DNTTIP2Q5QJE6 756 aaKnown RBP15.94■□□□□ 0.14
LDB3-207ENST00000542786 SPECC1LQ69YQ0 1117 aa15.94■□□□□ 0.14
LDB3-207ENST00000542786 IRF2BP1Q8IU81 584 aa15.94■□□□□ 0.14
LDB3-207ENST00000542786 OGFOD1Q8N543 542 aa15.94■□□□□ 0.14
LDB3-207ENST00000542786 AMNQ9BXJ7 453 aa15.94■□□□□ 0.14
LDB3-207ENST00000542786 ANO3Q9BYT9 981 aa15.94■□□□□ 0.14
LDB3-207ENST00000542786 STK17AQ9UEE5 414 aa15.94■□□□□ 0.14
LDB3-207ENST00000542786 DDX25Q9UHL0 483 aaKnown RBP15.94■□□□□ 0.14
LDB3-207ENST00000542786 NFKBIEO00221 500 aa15.93■□□□□ 0.14
LDB3-207ENST00000542786 TEX33O43247 280 aa15.93■□□□□ 0.14
LDB3-207ENST00000542786 COBLO75128 1261 aa15.93■□□□□ 0.14
LDB3-207ENST00000542786 ECE1P42892 770 aa15.93■□□□□ 0.14
LDB3-207ENST00000542786 GOLGA8FQ08AF8 430 aa15.93■□□□□ 0.14
LDB3-207ENST00000542786 GOLGA8DPQ0D2H9 430 aa15.93■□□□□ 0.14
LDB3-207ENST00000542786 AP3B2Q13367 1082 aa15.93■□□□□ 0.14
LDB3-207ENST00000542786 CNNM4Q6P4Q7 775 aa15.93■□□□□ 0.14
LDB3-207ENST00000542786 MOXD1Q6UVY6 613 aa15.93■□□□□ 0.14
LDB3-207ENST00000542786 RASSF8Q8NHQ8 419 aa15.93■□□□□ 0.14
LDB3-207ENST00000542786 C16orf45Q96MC5 204 aaPredicted RBP15.93■□□□□ 0.14
LDB3-207ENST00000542786 TMEM39BQ9GZU3 492 aa15.93■□□□□ 0.14
LDB3-207ENST00000542786 KCNMB3Q9NPA1 279 aa15.93■□□□□ 0.14
LDB3-207ENST00000542786 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.93■□□□□ 0.14
LDB3-207ENST00000542786 LRWD1Q9UFC0 647 aa15.93■□□□□ 0.14
LDB3-207ENST00000542786 UQCRHLA0A096LP55 91 aa15.93■□□□□ 0.14
LDB3-207ENST00000542786 POTEMA6NI47 508 aa15.93■□□□□ 0.14
LDB3-207ENST00000542786 ZBTB7AO95365 584 aa15.93■□□□□ 0.14
LDB3-207ENST00000542786 UQCRHP07919 91 aa15.93■□□□□ 0.14
LDB3-207ENST00000542786 GTF2F1P35269 517 aaKnown RBP eCLIP15.93■□□□□ 0.14
LDB3-207ENST00000542786 USP11P51784 963 aa15.93■□□□□ 0.14
LDB3-207ENST00000542786 PMS1P54277 932 aaKnown RBP15.93■□□□□ 0.14
LDB3-207ENST00000542786 COBLL1Q53SF7 1204 aa15.93■□□□□ 0.14
LDB3-207ENST00000542786 FBXO11Q86XK2 927 aa15.93■□□□□ 0.14
LDB3-207ENST00000542786 TC2NQ8N9U0 490 aa15.93■□□□□ 0.14
LDB3-207ENST00000542786 CCDC112Q8NEF3 446 aa15.93■□□□□ 0.14
LDB3-207ENST00000542786 PRR12Q9ULL5 1215 aa15.93■□□□□ 0.14
LDB3-207ENST00000542786 SHTN1A0MZ66 631 aa15.92■□□□□ 0.14
LDB3-207ENST00000542786 PSDA5PKW4 1024 aaPredicted RBP15.92■□□□□ 0.14
LDB3-207ENST00000542786 RAD21O60216 631 aa15.92■□□□□ 0.14
LDB3-207ENST00000542786 TAL1P17542 331 aaPredicted RBP15.92■□□□□ 0.14
LDB3-207ENST00000542786 ZNF280AP59817 542 aaPredicted RBP15.92■□□□□ 0.14
LDB3-207ENST00000542786 KRT31Q15323 416 aa15.92■□□□□ 0.14
LDB3-207ENST00000542786 TMEM266Q2M3C6 531 aa15.92■□□□□ 0.14
LDB3-207ENST00000542786 HYIQ5T013 277 aa15.92■□□□□ 0.14
LDB3-207ENST00000542786 TTI2Q6NXR4 508 aa15.92■□□□□ 0.14
LDB3-207ENST00000542786 KCNK18Q7Z418 384 aa15.92■□□□□ 0.14
LDB3-207ENST00000542786 CALML4Q96GE6 196 aa15.92■□□□□ 0.14
LDB3-207ENST00000542786 NAP1L4Q99733 375 aaKnown RBP15.92■□□□□ 0.14
LDB3-207ENST00000542786 WNT10BO00744 389 aa15.91■□□□□ 0.14
LDB3-207ENST00000542786 ECM1Q16610 540 aa15.91■□□□□ 0.14
LDB3-207ENST00000542786 TPD52L1Q16890 204 aaPredicted RBP15.91■□□□□ 0.14
LDB3-207ENST00000542786 DALRD3Q5D0E6 543 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms