RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 TCEANC2Q96MN5 208 aa23.3■■□□□ 1.32
CACNA2D4-215ENST00000542340 JAKMIP1Q96N16 626 aaKnown RBP23.3■■□□□ 1.32
CACNA2D4-215ENST00000542340 KBTBD13C9JR72 458 aa23.29■■□□□ 1.32
CACNA2D4-215ENST00000542340 RNF180Q86T96 592 aa23.29■■□□□ 1.32
CACNA2D4-215ENST00000542340 MPHOSPH6Q99547 160 aaKnown RBP23.29■■□□□ 1.32
CACNA2D4-215ENST00000542340 USP26Q9BXU7 913 aa23.29■■□□□ 1.32
CACNA2D4-215ENST00000542340 VTA1Q9NP79 307 aa23.29■■□□□ 1.32
CACNA2D4-215ENST00000542340 NR2E3Q9Y5X4 410 aa23.29■■□□□ 1.32
CACNA2D4-215ENST00000542340 MCM3APO60318 1980 aa23.29■■□□□ 1.32
CACNA2D4-215ENST00000542340 LCTP09848 1927 aa23.28■■□□□ 1.32
CACNA2D4-215ENST00000542340 EVI5O60447 810 aa23.28■■□□□ 1.32
CACNA2D4-215ENST00000542340 PGK1P00558 417 aa23.28■■□□□ 1.32
CACNA2D4-215ENST00000542340 RXRAP19793 462 aa23.28■■□□□ 1.32
CACNA2D4-215ENST00000542340 GHRHRQ02643 423 aa23.28■■□□□ 1.32
CACNA2D4-215ENST00000542340 APOA5Q6Q788 366 aa23.28■■□□□ 1.32
CACNA2D4-215ENST00000542340 BLOC1S2Q6QNY1 142 aa23.28■■□□□ 1.32
CACNA2D4-215ENST00000542340 SAMD3Q8N6K7 520 aa23.28■■□□□ 1.32
CACNA2D4-215ENST00000542340 SYTL5Q8TDW5 730 aaPredicted RBP23.28■■□□□ 1.32
CACNA2D4-215ENST00000542340 SENP6Q9GZR1 1112 aaPredicted RBP23.28■■□□□ 1.32
CACNA2D4-215ENST00000542340 MAP3K20Q9NYL2 800 aaKnown RBP23.28■■□□□ 1.32
CACNA2D4-215ENST00000542340 DDX49Q9Y6V7 483 aaKnown RBP23.28■■□□□ 1.32
CACNA2D4-215ENST00000542340 MYH6P13533 1939 aa23.27■■□□□ 1.32
CACNA2D4-215ENST00000542340 B4DLN1 442 aa23.27■■□□□ 1.32
CACNA2D4-215ENST00000542340 OPLAHO14841 1288 aa23.27■■□□□ 1.32
CACNA2D4-215ENST00000542340 ADAMTS4O75173 837 aa23.27■■□□□ 1.32
CACNA2D4-215ENST00000542340 MYCNP04198 464 aaPredicted RBP23.27■■□□□ 1.32
CACNA2D4-215ENST00000542340 EDNRBP24530 442 aa23.27■■□□□ 1.32
CACNA2D4-215ENST00000542340 PSMA5P28066 241 aa23.27■■□□□ 1.32
CACNA2D4-215ENST00000542340 MRPL12P52815 198 aaKnown RBP23.27■■□□□ 1.32
CACNA2D4-215ENST00000542340 SRBD1Q8N5C6 995 aaKnown RBP23.27■■□□□ 1.32
CACNA2D4-215ENST00000542340 LENG1Q96BZ8 264 aaPredicted RBP23.27■■□□□ 1.32
CACNA2D4-215ENST00000542340 RRP36Q96EU6 259 aaKnown RBP23.27■■□□□ 1.32
CACNA2D4-215ENST00000542340 BAZ2BQ9UIF8 2168 aaKnown RBP23.26■■□□□ 1.31
CACNA2D4-215ENST00000542340 ADCY6O43306 1168 aa23.26■■□□□ 1.31
CACNA2D4-215ENST00000542340 PLEKHA8P1O95397 391 aa23.26■■□□□ 1.31
CACNA2D4-215ENST00000542340 HSD17B4P51659 736 aa23.26■■□□□ 1.31
CACNA2D4-215ENST00000542340 TNFAIP2Q03169 654 aa23.26■■□□□ 1.31
CACNA2D4-215ENST00000542340 IQSEC1Q6DN90 963 aa23.26■■□□□ 1.31
CACNA2D4-215ENST00000542340 TAPT1Q6NXT6 567 aa23.26■■□□□ 1.31
CACNA2D4-215ENST00000542340 EEPD1Q7L9B9 569 aa23.26■■□□□ 1.31
CACNA2D4-215ENST00000542340 MICU3Q86XE3 530 aa23.26■■□□□ 1.31
CACNA2D4-215ENST00000542340 BRPF3Q9ULD4 1205 aa23.26■■□□□ 1.31
CACNA2D4-215ENST00000542340 SYNRGQ9UMZ2 1314 aa23.26■■□□□ 1.31
CACNA2D4-215ENST00000542340 H0YGN5 161 aa23.25■■□□□ 1.31
CACNA2D4-215ENST00000542340 CFBP00751 764 aa23.25■■□□□ 1.31
CACNA2D4-215ENST00000542340 CPA1P15085 419 aa23.25■■□□□ 1.31
CACNA2D4-215ENST00000542340 ADCYAP1R1P41586 468 aa23.25■■□□□ 1.31
CACNA2D4-215ENST00000542340 FGD1P98174 961 aa23.25■■□□□ 1.31
CACNA2D4-215ENST00000542340 PDE4DQ08499 809 aa23.25■■□□□ 1.31
CACNA2D4-215ENST00000542340 RAB11FIP4Q86YS3 637 aa23.25■■□□□ 1.31
CACNA2D4-215ENST00000542340 FBXO16Q8IX29 292 aaPredicted RBP23.25■■□□□ 1.31
CACNA2D4-215ENST00000542340 FBXL16Q8N461 479 aa23.25■■□□□ 1.31
CACNA2D4-215ENST00000542340 KLHDC9Q8NEP7 349 aa23.25■■□□□ 1.31
CACNA2D4-215ENST00000542340 NSUN6Q8TEA1 469 aaKnown RBP23.25■■□□□ 1.31
CACNA2D4-215ENST00000542340 TSEN34Q9BSV6 310 aaKnown RBP23.25■■□□□ 1.31
CACNA2D4-215ENST00000542340 UPF3AQ9H1J1 476 aaKnown RBP23.25■■□□□ 1.31
CACNA2D4-215ENST00000542340 SPC25Q9HBM1 224 aa23.25■■□□□ 1.31
CACNA2D4-215ENST00000542340 PDGFCQ9NRA1 345 aa23.25■■□□□ 1.31
CACNA2D4-215ENST00000542340 COL20A1Q9P218 1284 aa23.25■■□□□ 1.31
CACNA2D4-215ENST00000542340 PHF24Q9UPV7 400 aa23.25■■□□□ 1.31
CACNA2D4-215ENST00000542340 ZBTB43O43298 467 aa23.24■■□□□ 1.31
CACNA2D4-215ENST00000542340 RPS6KB1P23443 525 aa23.24■■□□□ 1.31
CACNA2D4-215ENST00000542340 RCAN1P53805 252 aa23.24■■□□□ 1.31
CACNA2D4-215ENST00000542340 GJA9P57773 515 aa23.24■■□□□ 1.31
CACNA2D4-215ENST00000542340 NKX3-2P78367 333 aa23.24■■□□□ 1.31
CACNA2D4-215ENST00000542340 Q6ZUG5 572 aa23.24■■□□□ 1.31
CACNA2D4-215ENST00000542340 TMTC3Q6ZXV5 915 aa23.24■■□□□ 1.31
CACNA2D4-215ENST00000542340 CMTR1Q8N1G2 835 aaKnown RBP23.24■■□□□ 1.31
CACNA2D4-215ENST00000542340 PIBF1Q8WXW3 757 aa23.24■■□□□ 1.31
CACNA2D4-215ENST00000542340 TAAR1Q96RJ0 339 aa23.24■■□□□ 1.31
CACNA2D4-215ENST00000542340 RBM28Q9NW13 759 aaKnown RBP23.24■■□□□ 1.31
CACNA2D4-215ENST00000542340 SEC63Q9UGP8 760 aaKnown RBP23.24■■□□□ 1.31
CACNA2D4-215ENST00000542340 CEP290O15078 2479 aa23.23■■□□□ 1.31
CACNA2D4-215ENST00000542340 KLF18A0A0U1RQI7 1052 aa23.23■■□□□ 1.31
CACNA2D4-215ENST00000542340 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.23■■□□□ 1.31
CACNA2D4-215ENST00000542340 CASTP20810 708 aaKnown RBP23.23■■□□□ 1.31
CACNA2D4-215ENST00000542340 CST5P28325 142 aaPredicted RBP23.23■■□□□ 1.31
CACNA2D4-215ENST00000542340 LRRC26Q2I0M4 334 aa23.23■■□□□ 1.31
CACNA2D4-215ENST00000542340 NOL8Q76FK4 1167 aaKnown RBP23.23■■□□□ 1.31
CACNA2D4-215ENST00000542340 IWS1Q96ST2 819 aa23.23■■□□□ 1.31
CACNA2D4-215ENST00000542340 RMDN3Q96TC7 470 aa23.23■■□□□ 1.31
CACNA2D4-215ENST00000542340 GNEQ9Y223 722 aaKnown RBP23.23■■□□□ 1.31
CACNA2D4-215ENST00000542340 Q9Y3F1 56 aa23.23■■□□□ 1.31
CACNA2D4-215ENST00000542340 RBM47A0AV96 593 aaKnown RBP23.22■■□□□ 1.31
CACNA2D4-215ENST00000542340 C6orf222P0C671 652 aaPredicted RBP23.22■■□□□ 1.31
CACNA2D4-215ENST00000542340 SMPD1P17405 629 aa23.22■■□□□ 1.31
CACNA2D4-215ENST00000542340 PPP2R5BQ15173 497 aa23.22■■□□□ 1.31
CACNA2D4-215ENST00000542340 RTN1Q16799 776 aa23.22■■□□□ 1.31
CACNA2D4-215ENST00000542340 CCSAPQ6IQ19 270 aaPredicted RBP23.22■■□□□ 1.31
CACNA2D4-215ENST00000542340 AGXT2Q9BYV1 514 aa23.22■■□□□ 1.31
CACNA2D4-215ENST00000542340 MOXD2PA6NHM9 499 aa23.21■■□□□ 1.31
CACNA2D4-215ENST00000542340 GCOM1H8Y6P7 765 aaPredicted RBP23.21■■□□□ 1.31
CACNA2D4-215ENST00000542340 EIF5BO60841 1220 aaKnown RBP23.21■■□□□ 1.31
CACNA2D4-215ENST00000542340 POLR2MP0CAP2 368 aa23.21■■□□□ 1.31
CACNA2D4-215ENST00000542340 ARHGEF16Q5VV41 709 aa23.21■■□□□ 1.31
CACNA2D4-215ENST00000542340 SLC39A5Q6ZMH5 540 aa23.21■■□□□ 1.31
CACNA2D4-215ENST00000542340 C7orf61Q8IZ16 206 aa23.21■■□□□ 1.31
CACNA2D4-215ENST00000542340 CCDC82Q8N4S0 544 aa23.21■■□□□ 1.31
CACNA2D4-215ENST00000542340 PCSK9Q8NBP7 692 aaKnown RBP23.21■■□□□ 1.31
CACNA2D4-215ENST00000542340 BRF1Q92994 677 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms