RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 A0A0C4DFX4 3053 aa23.37■■□□□ 1.33
DDX11-220ENST00000542244 CDH23Q9H251 3354 aa23.36■■□□□ 1.33
DDX11-220ENST00000542244 ITGA7Q13683 1181 aa23.36■■□□□ 1.33
DDX11-220ENST00000542244 TTC14Q96N46 770 aa23.36■■□□□ 1.33
DDX11-220ENST00000542244 AP5M1Q9H0R1 490 aa23.36■■□□□ 1.33
DDX11-220ENST00000542244 VTA1Q9NP79 307 aa23.36■■□□□ 1.33
DDX11-220ENST00000542244 EYSQ5T1H1 3165 aa23.36■■□□□ 1.33
DDX11-220ENST00000542244 ZNF213O14771 459 aa23.35■■□□□ 1.33
DDX11-220ENST00000542244 AAMPQ13685 434 aa23.35■■□□□ 1.33
DDX11-220ENST00000542244 USH1GQ495M9 461 aa23.35■■□□□ 1.33
DDX11-220ENST00000542244 COPS5Q92905 334 aa23.35■■□□□ 1.33
DDX11-220ENST00000542244 DIAPH3Q9NSV4 1193 aa23.35■■□□□ 1.33
DDX11-220ENST00000542244 LAMA4Q16363 1823 aa23.34■■□□□ 1.33
DDX11-220ENST00000542244 PBX2P40425 430 aa23.34■■□□□ 1.33
DDX11-220ENST00000542244 RPS6P62753 249 aaKnown RBP23.34■■□□□ 1.33
DDX11-220ENST00000542244 RNF207Q6ZRF8 634 aa23.34■■□□□ 1.33
DDX11-220ENST00000542244 ZNF365Q70YC5 407 aa23.34■■□□□ 1.33
DDX11-220ENST00000542244 ESR2Q92731 530 aa23.34■■□□□ 1.33
DDX11-220ENST00000542244 VWCEQ96DN2 955 aa23.34■■□□□ 1.33
DDX11-220ENST00000542244 WDR11Q9BZH6 1224 aa23.34■■□□□ 1.33
DDX11-220ENST00000542244 MROH7Q68CQ1 1323 aa23.33■■□□□ 1.33
DDX11-220ENST00000542244 UNC80Q8N2C7 3258 aa23.33■■□□□ 1.33
DDX11-220ENST00000542244 B4GALT4O60513 344 aa23.33■■□□□ 1.33
DDX11-220ENST00000542244 GSPT1P15170 499 aaKnown RBP23.33■■□□□ 1.33
DDX11-220ENST00000542244 DUSP28Q4G0W2 176 aa23.33■■□□□ 1.33
DDX11-220ENST00000542244 RASIP1Q5U651 963 aa23.33■■□□□ 1.33
DDX11-220ENST00000542244 RNF41Q9H4P4 317 aaPredicted RBP23.33■■□□□ 1.33
DDX11-220ENST00000542244 ZSWIM5Q9P217 1185 aa23.33■■□□□ 1.33
DDX11-220ENST00000542244 RBM47A0AV96 593 aaKnown RBP23.32■■□□□ 1.32
DDX11-220ENST00000542244 PCP11498 1178 aaKnown RBP23.32■■□□□ 1.32
DDX11-220ENST00000542244 CCL23P55773 120 aa23.32■■□□□ 1.32
DDX11-220ENST00000542244 GRIN2CQ14957 1233 aa23.32■■□□□ 1.32
DDX11-220ENST00000542244 DGKHQ86XP1 1220 aa23.32■■□□□ 1.32
DDX11-220ENST00000542244 ENAHQ8N8S7 591 aaPredicted RBP23.32■■□□□ 1.32
DDX11-220ENST00000542244 PNMA1Q8ND90 353 aa23.32■■□□□ 1.32
DDX11-220ENST00000542244 CXXC1Q9P0U4 656 aaPredicted RBP23.32■■□□□ 1.32
DDX11-220ENST00000542244 COL20A1Q9P218 1284 aa23.32■■□□□ 1.32
DDX11-220ENST00000542244 SUPT16HQ9Y5B9 1047 aaKnown RBP23.32■■□□□ 1.32
DDX11-220ENST00000542244 ARIH2O95376 493 aa23.31■■□□□ 1.32
DDX11-220ENST00000542244 EDNRBP24530 442 aa23.31■■□□□ 1.32
DDX11-220ENST00000542244 DNAJB2P25686 324 aa23.31■■□□□ 1.32
DDX11-220ENST00000542244 MFAP1P55081 439 aaKnown RBP23.31■■□□□ 1.32
DDX11-220ENST00000542244 IRX6P78412 446 aaPredicted RBP23.31■■□□□ 1.32
DDX11-220ENST00000542244 ANKS1AQ92625 1134 aa23.31■■□□□ 1.32
DDX11-220ENST00000542244 ZSCAN10Q96SZ4 725 aaPredicted RBP23.31■■□□□ 1.32
DDX11-220ENST00000542244 WNT8AQ9H1J5 351 aa23.31■■□□□ 1.32
DDX11-220ENST00000542244 ADD3Q9UEY8 706 aaKnown RBP23.31■■□□□ 1.32
DDX11-220ENST00000542244 Q9Y3F1 56 aa23.31■■□□□ 1.32
DDX11-220ENST00000542244 WDR19Q8NEZ3 1342 aa23.31■■□□□ 1.32
DDX11-220ENST00000542244 TLR3O15455 904 aaKnown RBP23.3■■□□□ 1.32
DDX11-220ENST00000542244 PPIGQ13427 754 aaKnown RBP eCLIP23.3■■□□□ 1.329e-7■■■□□ 15.8
DDX11-220ENST00000542244 CDC37Q16543 378 aaPredicted RBP23.3■■□□□ 1.32
DDX11-220ENST00000542244 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.3■■□□□ 1.32
DDX11-220ENST00000542244 ADGRF4Q8IZF3 695 aa23.3■■□□□ 1.32
DDX11-220ENST00000542244 DSCC1Q9BVC3 393 aa23.3■■□□□ 1.32
DDX11-220ENST00000542244 NOC4LQ9BVI4 516 aaKnown RBP23.3■■□□□ 1.32
DDX11-220ENST00000542244 HIPK3Q9H422 1215 aa23.3■■□□□ 1.32
DDX11-220ENST00000542244 TRMT13Q9NUP7 481 aaKnown RBP23.3■■□□□ 1.32
DDX11-220ENST00000542244 TAF6LQ9Y6J9 622 aa23.3■■□□□ 1.32
DDX11-220ENST00000542244 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.29■■□□□ 1.32
DDX11-220ENST00000542244 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.29■■□□□ 1.32
DDX11-220ENST00000542244 CABYRO75952 493 aa23.29■■□□□ 1.32
DDX11-220ENST00000542244 MYL3P08590 195 aa23.29■■□□□ 1.32
DDX11-220ENST00000542244 PURAQ00577 322 aaKnown RBP23.29■■□□□ 1.32
DDX11-220ENST00000542244 CYB5R4Q7L1T6 521 aa23.29■■□□□ 1.32
DDX11-220ENST00000542244 STAG2Q8N3U4 1231 aa23.29■■□□□ 1.32
DDX11-220ENST00000542244 TMEM199Q8N511 208 aa23.29■■□□□ 1.32
DDX11-220ENST00000542244 OR6J1Q8NGC5 347 aa23.29■■□□□ 1.32
DDX11-220ENST00000542244 MAFAQ8NHW3 353 aaPredicted RBP23.29■■□□□ 1.32
DDX11-220ENST00000542244 TAAR1Q96RJ0 339 aa23.29■■□□□ 1.32
DDX11-220ENST00000542244 TNKSO95271 1327 aa23.29■■□□□ 1.32
DDX11-220ENST00000542244 CYP2C9P11712 490 aa23.28■■□□□ 1.32
DDX11-220ENST00000542244 PDE4DQ08499 809 aa23.28■■□□□ 1.32
DDX11-220ENST00000542244 SLC35G1Q2M3R5 365 aa23.28■■□□□ 1.32
DDX11-220ENST00000542244 QRICH1Q2TAL8 776 aa23.28■■□□□ 1.32
DDX11-220ENST00000542244 GPATCH4Q5T3I0 446 aaKnown RBP23.28■■□□□ 1.32
DDX11-220ENST00000542244 SCLYQ96I15 445 aa23.28■■□□□ 1.32
DDX11-220ENST00000542244 COL25A1Q9BXS0 654 aaPredicted RBP23.28■■□□□ 1.32
DDX11-220ENST00000542244 PBX4Q9BYU1 374 aa23.28■■□□□ 1.32
DDX11-220ENST00000542244 ALDH8A1Q9H2A2 487 aaPredicted RBP23.28■■□□□ 1.32
DDX11-220ENST00000542244 KAT14Q9H8E8 782 aa23.28■■□□□ 1.32
DDX11-220ENST00000542244 VAT1LQ9HCJ6 419 aa23.28■■□□□ 1.32
DDX11-220ENST00000542244 IL23AQ9NPF7 189 aa23.28■■□□□ 1.32
DDX11-220ENST00000542244 JMJD4Q9H9V9 463 aa23.27■■□□□ 1.32
DDX11-220ENST00000542244 SENP2Q9HC62 589 aa23.27■■□□□ 1.32
DDX11-220ENST00000542244 ZEB2O60315 1214 aa23.26■■□□□ 1.31
DDX11-220ENST00000542244 FOSL2P15408 326 aa23.26■■□□□ 1.31
DDX11-220ENST00000542244 PTH1RQ03431 593 aa23.26■■□□□ 1.31
DDX11-220ENST00000542244 IMMTQ16891 758 aaKnown RBP23.26■■□□□ 1.31
DDX11-220ENST00000542244 TTC22Q5TAA0 569 aa23.26■■□□□ 1.31
DDX11-220ENST00000542244 OTOP2Q7RTS6 562 aa23.26■■□□□ 1.31
DDX11-220ENST00000542244 IQCA1Q86XH1 822 aa23.26■■□□□ 1.31
DDX11-220ENST00000542244 USP38Q8NB14 1042 aa23.26■■□□□ 1.31
DDX11-220ENST00000542244 SYTL5Q8TDW5 730 aaPredicted RBP23.26■■□□□ 1.31
DDX11-220ENST00000542244 TIFAQ96CG3 184 aa23.26■■□□□ 1.31
DDX11-220ENST00000542244 OPLAHO14841 1288 aa23.25■■□□□ 1.31
DDX11-220ENST00000542244 PPP1R11O60927 126 aaPredicted RBP23.25■■□□□ 1.31
DDX11-220ENST00000542244 SEC23AQ15436 765 aa23.25■■□□□ 1.31
DDX11-220ENST00000542244 ZNF576Q9H609 170 aa23.25■■□□□ 1.31
DDX11-220ENST00000542244 LOC102724159A0A0B4J2E5 919 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms