RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 OR8K1Q8NGG5 319 aa11.7□□□□□ -0.54
GABRB3-204ENST00000541819 FAM227BQ96M60 508 aa11.7□□□□□ -0.54
GABRB3-204ENST00000541819 RIPOR2Q9Y4F9 1068 aa11.7□□□□□ -0.54
GABRB3-204ENST00000541819 ACTN1P12814 892 aa11.7□□□□□ -0.54
GABRB3-204ENST00000541819 ICA1Q05084 483 aa11.7□□□□□ -0.54
GABRB3-204ENST00000541819 NEK8Q86SG6 692 aa11.7□□□□□ -0.54
GABRB3-204ENST00000541819 ZNF654Q8IZM8 581 aa11.7□□□□□ -0.54
GABRB3-204ENST00000541819 DSCC1Q9BVC3 393 aa11.7□□□□□ -0.54
GABRB3-204ENST00000541819 TEKT2Q9UIF3 430 aa11.7□□□□□ -0.54
GABRB3-204ENST00000541819 CPP00450 1065 aa11.7□□□□□ -0.54
GABRB3-204ENST00000541819 POLR2FP61218 127 aaKnown RBP11.7□□□□□ -0.54
GABRB3-204ENST00000541819 SLC52A2Q9HAB3 445 aa11.7□□□□□ -0.54
GABRB3-204ENST00000541819 PLEKHG3A1L390 1219 aa11.7□□□□□ -0.54
GABRB3-204ENST00000541819 LUC7L3O95232 432 aaKnown RBP11.7□□□□□ -0.54
GABRB3-204ENST00000541819 PYGLP06737 847 aa11.7□□□□□ -0.54
GABRB3-204ENST00000541819 BRD3Q15059 726 aa11.7□□□□□ -0.54
GABRB3-204ENST00000541819 KRT24Q2M2I5 525 aa11.7□□□□□ -0.54
GABRB3-204ENST00000541819 MIS18BP1Q6P0N0 1132 aa11.7□□□□□ -0.54
GABRB3-204ENST00000541819 CACTINQ8WUQ7 758 aaKnown RBP11.7□□□□□ -0.54
GABRB3-204ENST00000541819 NACC1Q96RE7 527 aa11.7□□□□□ -0.54
GABRB3-204ENST00000541819 POLR3AO14802 1390 aaPredicted RBP11.7□□□□□ -0.54
GABRB3-204ENST00000541819 GDAP1Q8TB36 358 aa11.69□□□□□ -0.54
GABRB3-204ENST00000541819 CCDC127Q96BQ5 260 aa11.69□□□□□ -0.54
GABRB3-204ENST00000541819 KRT82Q9NSB4 513 aa11.69□□□□□ -0.54
GABRB3-204ENST00000541819 IL9RQ01113 521 aa11.69□□□□□ -0.54
GABRB3-204ENST00000541819 PPP4R4Q6NUP7 873 aa11.69□□□□□ -0.54
GABRB3-204ENST00000541819 SPZ1Q9BXG8 430 aa11.69□□□□□ -0.54
GABRB3-204ENST00000541819 USP21Q9UK80 565 aa11.69□□□□□ -0.54
GABRB3-204ENST00000541819 FBXW4P57775 412 aa11.69□□□□□ -0.54
GABRB3-204ENST00000541819 PPP1R2P3Q6NXS1 205 aa11.69□□□□□ -0.54
GABRB3-204ENST00000541819 ZBTB40Q9NUA8 1239 aa11.69□□□□□ -0.54
GABRB3-204ENST00000541819 ARPP19P56211 112 aa11.69□□□□□ -0.54
GABRB3-204ENST00000541819 LRRC47Q8N1G4 583 aaKnown RBP11.69□□□□□ -0.54
GABRB3-204ENST00000541819 FBXL13Q8NEE6 735 aa11.69□□□□□ -0.54
GABRB3-204ENST00000541819 KLHDC4Q8TBB5 520 aa11.69□□□□□ -0.54
GABRB3-204ENST00000541819 CCDC138Q96M89 665 aa11.69□□□□□ -0.54
GABRB3-204ENST00000541819 NT5C1BQ96P26 610 aa11.69□□□□□ -0.54
GABRB3-204ENST00000541819 ABCF3Q9NUQ8 709 aa11.69□□□□□ -0.54
GABRB3-204ENST00000541819 E7EWF7 191 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 EEF1GP26641 437 aaKnown RBP11.68□□□□□ -0.54
GABRB3-204ENST00000541819 ADAM9Q13443 819 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 TBCCQ15814 346 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 TMTC3Q6ZXV5 915 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 MICAL1Q8TDZ2 1067 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 H2AFZP0C0S5 128 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 SOX5P35711 763 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 PPARGP37231 505 aaPredicted RBP11.68□□□□□ -0.54
GABRB3-204ENST00000541819 ARL4AP40617 200 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 EPHB1P54762 984 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 GABPB1Q06547 395 aaPredicted RBP11.68□□□□□ -0.54
GABRB3-204ENST00000541819 ZBTB17Q13105 803 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 H2AFVQ71UI9 128 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 SRRM1Q8IYB3 904 aaKnown RBP11.68□□□□□ -0.54
GABRB3-204ENST00000541819 PPWD1Q96BP3 646 aaKnown RBP11.68□□□□□ -0.54
GABRB3-204ENST00000541819 EFHD1Q9BUP0 239 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 CAPN7Q9Y6W3 813 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 CUL7Q14999 1698 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 ADKP55263 362 aaKnown RBP11.68□□□□□ -0.54
GABRB3-204ENST00000541819 C8orf34Q49A92 452 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 MYSM1Q5VVJ2 828 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 NDUFAF2Q8N183 169 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.68□□□□□ -0.54
GABRB3-204ENST00000541819 CCNYQ8ND76 341 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 ATP6V0A1Q93050 837 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 SUCLG2Q96I99 432 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 SCHIP1Q9P0W5 487 aaPredicted RBP11.68□□□□□ -0.54
GABRB3-204ENST00000541819 SOS2Q07890 1332 aaPredicted RBP11.68□□□□□ -0.54
GABRB3-204ENST00000541819 TMEM247A6NEH6 219 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 MED7O43513 233 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 SLC8A1P32418 973 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 C1orf228Q6PIY5 440 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 ADAT2Q7Z6V5 191 aaKnown RBP11.68□□□□□ -0.54
GABRB3-204ENST00000541819 SUFUQ9UMX1 484 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 POC1B-GALNT4F8VUJ3 575 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 DDAH1O94760 285 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 CSPG5O95196 566 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 TCP1P17987 556 aaKnown RBP11.68□□□□□ -0.54
GABRB3-204ENST00000541819 USP14P54578 494 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 CTSWP56202 376 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 ARHGEF18Q6ZSZ5 1173 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 SMAP1Q8IYB5 467 aaPredicted RBP11.68□□□□□ -0.54
GABRB3-204ENST00000541819 DNAAF3Q8N9W5 541 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 FAM81BQ96LP2 452 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 TLK1Q9UKI8 766 aa11.68□□□□□ -0.54
GABRB3-204ENST00000541819 MAP3K1Q13233 1512 aa11.67□□□□□ -0.54
GABRB3-204ENST00000541819 RPRD2Q5VT52 1461 aaKnown RBP11.67□□□□□ -0.54
GABRB3-204ENST00000541819 IFNA8P32881 189 aa11.67□□□□□ -0.54
GABRB3-204ENST00000541819 ABCD1P33897 745 aa11.67□□□□□ -0.54
GABRB3-204ENST00000541819 RPS8P62241 208 aaKnown RBP11.67□□□□□ -0.54
GABRB3-204ENST00000541819 RCN2Q14257 317 aa11.67□□□□□ -0.54
GABRB3-204ENST00000541819 BANK1Q8NDB2 785 aa11.67□□□□□ -0.54
GABRB3-204ENST00000541819 FAM149B1Q96BN6 582 aa11.67□□□□□ -0.54
GABRB3-204ENST00000541819 TTC25Q96NG3 672 aa11.67□□□□□ -0.54
GABRB3-204ENST00000541819 NUDCD1Q96RS6 583 aa11.67□□□□□ -0.54
GABRB3-204ENST00000541819 TMEM232C9JQI7 657 aa11.67□□□□□ -0.54
GABRB3-204ENST00000541819 MCF2LO15068 1137 aa11.67□□□□□ -0.54
GABRB3-204ENST00000541819 FOSP01100 380 aaPredicted RBP11.67□□□□□ -0.54
GABRB3-204ENST00000541819 A1BGP04217 495 aa11.67□□□□□ -0.54
GABRB3-204ENST00000541819 HNRNPDLO14979 420 aaKnown RBP11.67□□□□□ -0.54
GABRB3-204ENST00000541819 BTDP43251 543 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms