RNA–Protein interactions for RNA: ENST00000541623.5

ARAP1-214, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, human

TSL 5

Gene ARAP1, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARAP1-214	ENST00000541623	CNGA1	P29973	690 aa		18.53	■□□□□ 0.56
ARAP1-214	ENST00000541623	UPF3B	Q9BZI7	483 aa	Known RBP	18.53	■□□□□ 0.56
ARAP1-214	ENST00000541623	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	18.53	■□□□□ 0.56
ARAP1-214	ENST00000541623	DDX20	Q9UHI6	824 aa	Known RBP	18.53	■□□□□ 0.56
ARAP1-214	ENST00000541623	SOWAHB	A6NEL2	793 aa		18.52	■□□□□ 0.56
ARAP1-214	ENST00000541623	CALML3	P27482	149 aa		18.52	■□□□□ 0.56
ARAP1-214	ENST00000541623	SLC35G1	Q2M3R5	365 aa		18.52	■□□□□ 0.56
ARAP1-214	ENST00000541623	CPLX2	Q6PUV4	134 aa	Known RBP	18.52	■□□□□ 0.56
ARAP1-214	ENST00000541623	ARMCX2	Q7L311	632 aa		18.52	■□□□□ 0.56
ARAP1-214	ENST00000541623	MORC4	Q8TE76	937 aa		18.52	■□□□□ 0.56
ARAP1-214	ENST00000541623	FAM184B	Q9ULE4	1060 aa		18.52	■□□□□ 0.56
ARAP1-214	ENST00000541623	ZNFX1	Q9P2E3	1918 aa	Known RBP	18.52	■□□□□ 0.56
ARAP1-214	ENST00000541623	GCOM1	H8Y6P7	765 aa	Predicted RBP	18.51	■□□□□ 0.55
ARAP1-214	ENST00000541623	PPP1R11	O60927	126 aa	Predicted RBP	18.51	■□□□□ 0.55
ARAP1-214	ENST00000541623	SEC24B	O95487	1268 aa		18.51	■□□□□ 0.55
ARAP1-214	ENST00000541623	POLR2M	P0CAP2	368 aa		18.51	■□□□□ 0.55
ARAP1-214	ENST00000541623	AKR1A1	P14550	325 aa		18.51	■□□□□ 0.55
ARAP1-214	ENST00000541623	EN2	P19622	333 aa	Predicted RBP	18.51	■□□□□ 0.55
ARAP1-214	ENST00000541623	PDIA3	P30101	505 aa	Known RBP	18.51	■□□□□ 0.55
ARAP1-214	ENST00000541623	CCND3	P30281	292 aa	Predicted RBP	18.51	■□□□□ 0.55
ARAP1-214	ENST00000541623	HSD17B4	P51659	736 aa		18.51	■□□□□ 0.55
ARAP1-214	ENST00000541623	ACVR2B	Q13705	512 aa		18.51	■□□□□ 0.55
ARAP1-214	ENST00000541623	NSUN6	Q8TEA1	469 aa	Known RBP	18.51	■□□□□ 0.55
ARAP1-214	ENST00000541623	FGD4	Q96M96	766 aa		18.51	■□□□□ 0.55
ARAP1-214	ENST00000541623	IWS1	Q96ST2	819 aa		18.51	■□□□□ 0.55
ARAP1-214	ENST00000541623	GLT8D2	Q9H1C3	349 aa		18.51	■□□□□ 0.55
ARAP1-214	ENST00000541623	VTA1	Q9NP79	307 aa		18.51	■□□□□ 0.55
ARAP1-214	ENST00000541623	OGDHL	Q9ULD0	1010 aa		18.51	■□□□□ 0.55
ARAP1-214	ENST00000541623	SNAI1	O95863	264 aa	Predicted RBP	18.5	■□□□□ 0.55
ARAP1-214	ENST00000541623	CFB	P00751	764 aa		18.5	■□□□□ 0.55
ARAP1-214	ENST00000541623	ALDH5A1	P51649	535 aa	Predicted RBP	18.5	■□□□□ 0.55
ARAP1-214	ENST00000541623	AKAP17A	Q02040	695 aa	Known RBP	18.5	■□□□□ 0.55
ARAP1-214	ENST00000541623	TOB2	Q14106	344 aa	Predicted RBP	18.5	■□□□□ 0.55
ARAP1-214	ENST00000541623	LHX8	Q68G74	356 aa		18.5	■□□□□ 0.55
ARAP1-214	ENST00000541623	SLC30A10	Q6XR72	485 aa		18.5	■□□□□ 0.55
ARAP1-214	ENST00000541623	RAB11FIP4	Q86YS3	637 aa		18.5	■□□□□ 0.55
ARAP1-214	ENST00000541623	ARRDC4	Q8NCT1	418 aa		18.5	■□□□□ 0.55
ARAP1-214	ENST00000541623	SYTL5	Q8TDW5	730 aa	Predicted RBP	18.5	■□□□□ 0.55
ARAP1-214	ENST00000541623	CUL5	Q93034	780 aa		18.5	■□□□□ 0.55
ARAP1-214	ENST00000541623	KIAA0100	Q14667	2235 aa	Known RBP	18.5	■□□□□ 0.55
ARAP1-214	ENST00000541623	ZNF865	P0CJ78	1059 aa	Predicted RBP	18.49	■□□□□ 0.55
ARAP1-214	ENST00000541623	RARB	P10826	455 aa		18.49	■□□□□ 0.55
ARAP1-214	ENST00000541623	MLLT1	Q03111	559 aa	Predicted RBP	18.49	■□□□□ 0.55
ARAP1-214	ENST00000541623	PDE4D	Q08499	809 aa		18.49	■□□□□ 0.55
ARAP1-214	ENST00000541623	FUT2	Q10981	343 aa		18.49	■□□□□ 0.55
ARAP1-214	ENST00000541623	PPP1R18	Q6NYC8	613 aa		18.49	■□□□□ 0.55
ARAP1-214	ENST00000541623	CCDC82	Q8N4S0	544 aa		18.49	■□□□□ 0.55
ARAP1-214	ENST00000541623	TRPV1	Q8NER1	839 aa		18.49	■□□□□ 0.55
ARAP1-214	ENST00000541623	C22orf23	Q9BZE7	217 aa		18.49	■□□□□ 0.55
ARAP1-214	ENST00000541623	FAM217B	Q9NTX9	383 aa	Predicted RBP	18.49	■□□□□ 0.55
ARAP1-214	ENST00000541623	ZHX1	Q9UKY1	873 aa	Predicted RBP	18.49	■□□□□ 0.55
ARAP1-214	ENST00000541623	CENPF	P49454	3210 aa		18.49	■□□□□ 0.55
ARAP1-214	ENST00000541623	CNTNAP5	Q8WYK1	1306 aa		18.49	■□□□□ 0.55
ARAP1-214	ENST00000541623	PLXNA1	Q9UIW2	1896 aa		18.48	■□□□□ 0.55
ARAP1-214	ENST00000541623	CPLX1	O14810	134 aa		18.48	■□□□□ 0.55
ARAP1-214	ENST00000541623	IFNAR1	P17181	557 aa		18.48	■□□□□ 0.55
ARAP1-214	ENST00000541623	TAL1	P17542	331 aa	Predicted RBP	18.48	■□□□□ 0.55
ARAP1-214	ENST00000541623	EDNRB	P24530	442 aa		18.48	■□□□□ 0.55
ARAP1-214	ENST00000541623	CDC27	P30260	824 aa		18.48	■□□□□ 0.55
ARAP1-214	ENST00000541623	ADD1	P35611	737 aa	Known RBP	18.48	■□□□□ 0.55
ARAP1-214	ENST00000541623	RBM25	P49756	843 aa	Known RBP	18.48	■□□□□ 0.55
ARAP1-214	ENST00000541623	PRAMEF19	Q5SWL8	479 aa		18.48	■□□□□ 0.55
ARAP1-214	ENST00000541623	IQSEC1	Q6DN90	963 aa		18.48	■□□□□ 0.55
ARAP1-214	ENST00000541623	CMTR1	Q8N1G2	835 aa	Known RBP	18.48	■□□□□ 0.55
ARAP1-214	ENST00000541623	CCDC12	Q8WUD4	166 aa	Predicted RBP	18.48	■□□□□ 0.55
ARAP1-214	ENST00000541623	PIBF1	Q8WXW3	757 aa		18.48	■□□□□ 0.55
ARAP1-214	ENST00000541623	RMDN3	Q96TC7	470 aa		18.48	■□□□□ 0.55
ARAP1-214	ENST00000541623		V9GY48	417 aa	Predicted RBP	18.48	■□□□□ 0.55
ARAP1-214	ENST00000541623	PIK3CD	O00329	1044 aa		18.47	■□□□□ 0.55
ARAP1-214	ENST00000541623	PRPF3	O43395	683 aa	Known RBP	18.47	■□□□□ 0.55
ARAP1-214	ENST00000541623	CDKL5	O76039	1030 aa		18.47	■□□□□ 0.55
ARAP1-214	ENST00000541623	FARP2	O94887	1054 aa	Predicted RBP	18.47	■□□□□ 0.55
ARAP1-214	ENST00000541623	NEK4	P51957	841 aa		18.47	■□□□□ 0.55
ARAP1-214	ENST00000541623	ARHGEF16	Q5VV41	709 aa		18.47	■□□□□ 0.55
ARAP1-214	ENST00000541623	NECAB2	Q7Z6G3	386 aa		18.47	■□□□□ 0.55
ARAP1-214	ENST00000541623	TRIM22	Q8IYM9	498 aa		18.47	■□□□□ 0.55
ARAP1-214	ENST00000541623	SHISA4	Q96DD7	197 aa		18.47	■□□□□ 0.55
ARAP1-214	ENST00000541623	RNF26	Q9BY78	433 aa	Predicted RBP	18.47	■□□□□ 0.55
ARAP1-214	ENST00000541623	PSTPIP2	Q9H939	334 aa		18.47	■□□□□ 0.55
ARAP1-214	ENST00000541623	SPC25	Q9HBM1	224 aa		18.47	■□□□□ 0.55
ARAP1-214	ENST00000541623	OPLAH	O14841	1288 aa		18.46	■□□□□ 0.55
ARAP1-214	ENST00000541623	DUSP11	O75319	330 aa	Known RBP	18.46	■□□□□ 0.55
ARAP1-214	ENST00000541623	STXBP2	Q15833	593 aa		18.46	■□□□□ 0.55
ARAP1-214	ENST00000541623	MCTP2	Q6DN12	878 aa		18.46	■□□□□ 0.55
ARAP1-214	ENST00000541623	HEATR3	Q7Z4Q2	680 aa		18.46	■□□□□ 0.55
ARAP1-214	ENST00000541623	FAM177A1	Q8N128	213 aa	Predicted RBP	18.46	■□□□□ 0.55
ARAP1-214	ENST00000541623	TBC1D5	Q92609	795 aa		18.46	■□□□□ 0.55
ARAP1-214	ENST00000541623	ASTN1	O14525	1302 aa		18.46	■□□□□ 0.55
ARAP1-214	ENST00000541623	PFKFB3	Q16875	520 aa	Predicted RBP	18.45	■□□□□ 0.54
ARAP1-214	ENST00000541623	CCDC144B	Q3MJ40	725 aa		18.45	■□□□□ 0.54
ARAP1-214	ENST00000541623	XRRA1	Q6P2D8	792 aa		18.45	■□□□□ 0.54
ARAP1-214	ENST00000541623	RNF180	Q86T96	592 aa		18.45	■□□□□ 0.54
ARAP1-214	ENST00000541623	SMARCC2	Q8TAQ2	1214 aa		18.45	■□□□□ 0.54
ARAP1-214	ENST00000541623	TAAR1	Q96RJ0	339 aa		18.45	■□□□□ 0.54
ARAP1-214	ENST00000541623	HTATIP2	Q9BUP3	242 aa		18.45	■□□□□ 0.54
ARAP1-214	ENST00000541623	KATNBL1	Q9H079	304 aa		18.45	■□□□□ 0.54
ARAP1-214	ENST00000541623	SLK	Q9H2G2	1235 aa	Predicted RBP	18.45	■□□□□ 0.54
ARAP1-214	ENST00000541623	XPNPEP3	Q9NQH7	507 aa		18.45	■□□□□ 0.54
ARAP1-214	ENST00000541623	BARHL2	Q9NY43	387 aa		18.45	■□□□□ 0.54
ARAP1-214	ENST00000541623		Q9Y3F1	56 aa		18.45	■□□□□ 0.54

Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms