RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 PHF20Q9BVI0 1012 aa16.51■□□□□ 0.23
AC005840.4-201ENST00000541242 RBM12Q9NTZ6 932 aaKnown RBP16.51■□□□□ 0.23
AC005840.4-201ENST00000541242 NFU1Q9UMS0 254 aa16.51■□□□□ 0.23
AC005840.4-201ENST00000541242 V9GY48 417 aaPredicted RBP16.51■□□□□ 0.23
AC005840.4-201ENST00000541242 PDS5AQ29RF7 1337 aaKnown RBP16.51■□□□□ 0.23
AC005840.4-201ENST00000541242 ERICH2A1L162 156 aa16.51■□□□□ 0.23
AC005840.4-201ENST00000541242 ZPR1O75312 459 aa16.51■□□□□ 0.23
AC005840.4-201ENST00000541242 PLEKHA8P1O95397 391 aa16.51■□□□□ 0.23
AC005840.4-201ENST00000541242 MCM7P33993 719 aa16.51■□□□□ 0.23
AC005840.4-201ENST00000541242 CARSP49589 748 aaKnown RBP16.51■□□□□ 0.23
AC005840.4-201ENST00000541242 GUCY2FP51841 1108 aa16.51■□□□□ 0.23
AC005840.4-201ENST00000541242 ALS2CLQ60I27 953 aa16.51■□□□□ 0.23
AC005840.4-201ENST00000541242 CCDC13Q8IYE1 715 aa16.51■□□□□ 0.23
AC005840.4-201ENST00000541242 ANKRD13CQ8N6S4 541 aa16.51■□□□□ 0.23
AC005840.4-201ENST00000541242 MIGA1Q8NAN2 632 aa16.51■□□□□ 0.23
AC005840.4-201ENST00000541242 TRIM47Q96LD4 638 aa16.51■□□□□ 0.23
AC005840.4-201ENST00000541242 PLIN2Q99541 437 aa16.51■□□□□ 0.23
AC005840.4-201ENST00000541242 TTYH3Q9C0H2 523 aa16.51■□□□□ 0.23
AC005840.4-201ENST00000541242 EPN3Q9H201 632 aa16.51■□□□□ 0.23
AC005840.4-201ENST00000541242 ZNF652Q9Y2D9 606 aa16.51■□□□□ 0.23
AC005840.4-201ENST00000541242 BCORQ6W2J9 1755 aa16.5■□□□□ 0.23
AC005840.4-201ENST00000541242 RDXP35241 583 aaKnown RBP16.5■□□□□ 0.23
AC005840.4-201ENST00000541242 GYG1P46976 350 aa16.5■□□□□ 0.23
AC005840.4-201ENST00000541242 DNA2P51530 1060 aa16.5■□□□□ 0.23
AC005840.4-201ENST00000541242 VAV2P52735 878 aa16.5■□□□□ 0.23
AC005840.4-201ENST00000541242 KCTD19Q17RG1 926 aaPredicted RBP16.5■□□□□ 0.23
AC005840.4-201ENST00000541242 CCDC181Q5TID7 509 aa16.5■□□□□ 0.23
AC005840.4-201ENST00000541242 IFT81Q8WYA0 676 aa16.5■□□□□ 0.23
AC005840.4-201ENST00000541242 KRT23Q9C075 422 aa16.5■□□□□ 0.23
AC005840.4-201ENST00000541242 ZNHIT6Q9NWK9 470 aaKnown RBP16.5■□□□□ 0.23
AC005840.4-201ENST00000541242 A0A1W2PQC6 194 aa16.5■□□□□ 0.23
AC005840.4-201ENST00000541242 GLI1P08151 1106 aa16.5■□□□□ 0.23
AC005840.4-201ENST00000541242 SPRED3Q2MJR0 410 aa16.5■□□□□ 0.23
AC005840.4-201ENST00000541242 C8orf74Q6P047 294 aa16.5■□□□□ 0.23
AC005840.4-201ENST00000541242 EMBQ6PCB8 327 aa16.5■□□□□ 0.23
AC005840.4-201ENST00000541242 CLEC4GQ6UXB4 293 aa16.5■□□□□ 0.23
AC005840.4-201ENST00000541242 ZNF662Q6ZS27 426 aa16.5■□□□□ 0.23
AC005840.4-201ENST00000541242 ADGRA1Q86SQ6 560 aa16.5■□□□□ 0.23
AC005840.4-201ENST00000541242 ADSSL1Q8N142 457 aa16.5■□□□□ 0.23
AC005840.4-201ENST00000541242 FNBP4Q8N3X1 1017 aaPredicted RBP16.5■□□□□ 0.23
AC005840.4-201ENST00000541242 N4BP2L2Q92802 583 aaPredicted RBP16.5■□□□□ 0.23
AC005840.4-201ENST00000541242 CCT8L2Q96SF2 557 aa16.5■□□□□ 0.23
AC005840.4-201ENST00000541242 CNNM2Q9H8M5 875 aa16.5■□□□□ 0.23
AC005840.4-201ENST00000541242 NID2Q14112 1375 aa16.49■□□□□ 0.23
AC005840.4-201ENST00000541242 CHUKO15111 745 aa16.49■□□□□ 0.23
AC005840.4-201ENST00000541242 PDHBP11177 359 aa16.49■□□□□ 0.23
AC005840.4-201ENST00000541242 ATP2C1P98194 919 aaPredicted RBP16.49■□□□□ 0.23
AC005840.4-201ENST00000541242 TRADDQ15628 312 aa16.49■□□□□ 0.23
AC005840.4-201ENST00000541242 PTGISQ16647 500 aa16.49■□□□□ 0.23
AC005840.4-201ENST00000541242 CCDC40Q4G0X9 1142 aa16.49■□□□□ 0.23
AC005840.4-201ENST00000541242 TBC1D9BQ66K14 1250 aa16.49■□□□□ 0.23
AC005840.4-201ENST00000541242 TYW1BQ6NUM6 668 aa16.49■□□□□ 0.23
AC005840.4-201ENST00000541242 KDM7AQ6ZMT4 941 aa16.49■□□□□ 0.23
AC005840.4-201ENST00000541242 VCPKMTQ9H867 229 aa16.49■□□□□ 0.23
AC005840.4-201ENST00000541242 A1CFQ9NQ94 594 aaKnown RBP16.49■□□□□ 0.23
AC005840.4-201ENST00000541242 LRP2BPQ9P2M1 347 aa16.49■□□□□ 0.23
AC005840.4-201ENST00000541242 MCM8Q9UJA3 840 aa16.49■□□□□ 0.23
AC005840.4-201ENST00000541242 SLC4A4Q9Y6R1 1079 aa16.49■□□□□ 0.23
AC005840.4-201ENST00000541242 ATXN2Q99700 1313 aaKnown RBP16.49■□□□□ 0.23
AC005840.4-201ENST00000541242 NR1D1P20393 614 aa16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 ELF1P32519 619 aa16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 TBC1D8BQ0IIM8 1120 aa16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 CFAP58Q5T655 872 aa16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 NLRP14Q86W24 1093 aa16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 MYCBPAPQ8TBZ2 947 aa16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 TUBGCP2Q9BSJ2 902 aa16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 SLC40A1Q9NP59 571 aa16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 PPANQ9NQ55 473 aaKnown RBP16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 EXOC1Q9NV70 894 aa16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 SALL4Q9UJQ4 1053 aa16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 USP21Q9UK80 565 aa16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 E7EVH7 732 aa16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 TACC1O75410 805 aa16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 PPP1R37O75864 691 aa16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 SRGNP10124 158 aa16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 NEDD9Q14511 834 aa16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 NPY5RQ15761 445 aa16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 PIK3AP1Q6ZUJ8 805 aa16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 TRIM58Q8NG06 486 aa16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 PIK3R5Q8WYR1 880 aa16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 CAVIN3Q969G5 261 aa16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 CCDC42Q96M95 316 aa16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 RNF26Q9BY78 433 aaPredicted RBP16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 IFIH1Q9BYX4 1025 aaKnown RBP16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 SRP68Q9UHB9 627 aaKnown RBP16.48■□□□□ 0.23
AC005840.4-201ENST00000541242 PP2D1A8MPX8 630 aa16.47■□□□□ 0.23
AC005840.4-201ENST00000541242 KIF1CO43896 1103 aaKnown RBP16.47■□□□□ 0.23
AC005840.4-201ENST00000541242 HPDP32754 393 aaPredicted RBP16.47■□□□□ 0.23
AC005840.4-201ENST00000541242 DNM2P50570 870 aa16.47■□□□□ 0.23
AC005840.4-201ENST00000541242 SF3B3Q15393 1217 aaKnown RBP16.47■□□□□ 0.23
AC005840.4-201ENST00000541242 SPA17Q15506 151 aa16.47■□□□□ 0.23
AC005840.4-201ENST00000541242 CEP57Q86XR8 500 aa16.47■□□□□ 0.23
AC005840.4-201ENST00000541242 CELF1Q92879 486 aaKnown RBP16.47■□□□□ 0.23
AC005840.4-201ENST00000541242 UBAC1Q9BSL1 405 aa16.47■□□□□ 0.23
AC005840.4-201ENST00000541242 SH2D4AQ9H788 454 aa16.47■□□□□ 0.23
AC005840.4-201ENST00000541242 MAGEC2Q9UBF1 373 aaPredicted RBP16.47■□□□□ 0.23
AC005840.4-201ENST00000541242 COL1A1P02452 1464 aaPredicted RBP16.47■□□□□ 0.23
AC005840.4-201ENST00000541242 CASZ1Q86V15 1759 aa16.47■□□□□ 0.23
AC005840.4-201ENST00000541242 BACH1O14867 736 aa16.47■□□□□ 0.23
AC005840.4-201ENST00000541242 RASSF9O75901 435 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms