RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 FBXO11Q86XK2 927 aa16.54■□□□□ 0.24
LTBR-209ENST00000541102 KLHDC9Q8NEP7 349 aa16.54■□□□□ 0.24
LTBR-209ENST00000541102 TBC1D5Q92609 795 aa16.54■□□□□ 0.24
LTBR-209ENST00000541102 VTI1AQ96AJ9 217 aa16.54■□□□□ 0.24
LTBR-209ENST00000541102 GDF15Q99988 308 aa16.54■□□□□ 0.24
LTBR-209ENST00000541102 TSEN34Q9BSV6 310 aaKnown RBP16.54■□□□□ 0.24
LTBR-209ENST00000541102 LY9Q9HBG7 655 aa16.54■□□□□ 0.24
LTBR-209ENST00000541102 PRKAG2Q9UGJ0 569 aa16.54■□□□□ 0.24
LTBR-209ENST00000541102 MAD2L2Q9UI95 211 aa16.54■□□□□ 0.24
LTBR-209ENST00000541102 ABCB11O95342 1321 aa16.53■□□□□ 0.24
LTBR-209ENST00000541102 A0A1W2PQ45 241 aaPredicted RBP16.53■□□□□ 0.24
LTBR-209ENST00000541102 A0A1W2PQY0 241 aa16.53■□□□□ 0.24
LTBR-209ENST00000541102 PALM3A6NDB9 673 aaPredicted RBP16.53■□□□□ 0.24
LTBR-209ENST00000541102 SH2B2O14492 632 aaPredicted RBP16.53■□□□□ 0.24
LTBR-209ENST00000541102 CASTP20810 708 aaKnown RBP16.53■□□□□ 0.24
LTBR-209ENST00000541102 PTGS1P23219 599 aa16.53■□□□□ 0.24
LTBR-209ENST00000541102 MCM5P33992 734 aa16.53■□□□□ 0.24
LTBR-209ENST00000541102 FXR1P51114 621 aaKnown RBP eCLIP16.53■□□□□ 0.24
LTBR-209ENST00000541102 GJA9P57773 515 aa16.53■□□□□ 0.24
LTBR-209ENST00000541102 BEX3Q00994 111 aa16.53■□□□□ 0.24
LTBR-209ENST00000541102 TLE2Q04725 743 aa16.53■□□□□ 0.24
LTBR-209ENST00000541102 GRM4Q14833 912 aa16.53■□□□□ 0.24
LTBR-209ENST00000541102 IQSEC1Q6DN90 963 aa16.53■□□□□ 0.24
LTBR-209ENST00000541102 TAPT1Q6NXT6 567 aa16.53■□□□□ 0.24
LTBR-209ENST00000541102 CATIPQ7Z7H3 387 aa16.53■□□□□ 0.24
LTBR-209ENST00000541102 NUP133Q8WUM0 1156 aa16.53■□□□□ 0.24
LTBR-209ENST00000541102 BACH2Q9BYV9 841 aa16.53■□□□□ 0.24
LTBR-209ENST00000541102 VTA1Q9NP79 307 aa16.53■□□□□ 0.24
LTBR-209ENST00000541102 PRDM5Q9NQX1 630 aaPredicted RBP16.53■□□□□ 0.24
LTBR-209ENST00000541102 DYNC1LI2O43237 492 aaPredicted RBP16.52■□□□□ 0.24
LTBR-209ENST00000541102 SMPD1P17405 629 aa16.52■□□□□ 0.24
LTBR-209ENST00000541102 PDE4DQ08499 809 aa16.52■□□□□ 0.24
LTBR-209ENST00000541102 KRT32Q14532 448 aa16.52■□□□□ 0.24
LTBR-209ENST00000541102 TMEM63BQ5T3F8 832 aa16.52■□□□□ 0.24
LTBR-209ENST00000541102 DHX32Q7L7V1 743 aaKnown RBP16.52■□□□□ 0.24
LTBR-209ENST00000541102 PCSK9Q8NBP7 692 aaKnown RBP16.52■□□□□ 0.24
LTBR-209ENST00000541102 RGS22Q8NE09 1264 aa16.52■□□□□ 0.24
LTBR-209ENST00000541102 MORC4Q8TE76 937 aa16.52■□□□□ 0.24
LTBR-209ENST00000541102 KIF2CQ99661 725 aa16.52■□□□□ 0.24
LTBR-209ENST00000541102 LBHD1Q9BQE6 289 aaPredicted RBP16.52■□□□□ 0.24
LTBR-209ENST00000541102 AMNQ9BXJ7 453 aa16.52■□□□□ 0.24
LTBR-209ENST00000541102 UPF3BQ9BZI7 483 aaKnown RBP16.52■□□□□ 0.24
LTBR-209ENST00000541102 UBE2OQ9C0C9 1292 aaKnown RBP16.52■□□□□ 0.24
LTBR-209ENST00000541102 AP5M1Q9H0R1 490 aa16.52■□□□□ 0.24
LTBR-209ENST00000541102 UPF3AQ9H1J1 476 aaKnown RBP16.52■□□□□ 0.24
LTBR-209ENST00000541102 STARD7Q9NQZ5 370 aa16.52■□□□□ 0.24
LTBR-209ENST00000541102 MRPL11Q9Y3B7 192 aaKnown RBP16.52■□□□□ 0.24
LTBR-209ENST00000541102 MOXD2PA6NHM9 499 aa16.51■□□□□ 0.23
LTBR-209ENST00000541102 PQBP1O60828 265 aaKnown RBP16.51■□□□□ 0.23
LTBR-209ENST00000541102 ASGR1P07306 291 aa16.51■□□□□ 0.23
LTBR-209ENST00000541102 RPS6KB1P23443 525 aa16.51■□□□□ 0.23
LTBR-209ENST00000541102 BMP8BP34820 402 aa16.51■□□□□ 0.23
LTBR-209ENST00000541102 TROAPQ12815 778 aa16.51■□□□□ 0.23
LTBR-209ENST00000541102 SNX17Q15036 470 aa16.51■□□□□ 0.23
LTBR-209ENST00000541102 CCSAPQ6IQ19 270 aaPredicted RBP16.51■□□□□ 0.23
LTBR-209ENST00000541102 NFXL1Q6ZNB6 911 aa16.51■□□□□ 0.23
LTBR-209ENST00000541102 TLK2Q86UE8 772 aa16.51■□□□□ 0.23
LTBR-209ENST00000541102 HOMER1Q86YM7 354 aa16.51■□□□□ 0.23
LTBR-209ENST00000541102 MCF2L2Q86YR7 1114 aa16.51■□□□□ 0.23
LTBR-209ENST00000541102 RAB11FIP4Q86YS3 637 aa16.51■□□□□ 0.23
LTBR-209ENST00000541102 SYTL5Q8TDW5 730 aaPredicted RBP16.51■□□□□ 0.23
LTBR-209ENST00000541102 PIBF1Q8WXW3 757 aa16.51■□□□□ 0.23
LTBR-209ENST00000541102 IL17RAQ96F46 866 aa16.51■□□□□ 0.23
LTBR-209ENST00000541102 PIGSQ96S52 555 aa16.51■□□□□ 0.23
LTBR-209ENST00000541102 MPHOSPH6Q99547 160 aaKnown RBP16.51■□□□□ 0.23
LTBR-209ENST00000541102 MYL10Q9BUA6 226 aa16.51■□□□□ 0.23
LTBR-209ENST00000541102 ZSWIM6Q9HCJ5 1215 aa16.51■□□□□ 0.23
LTBR-209ENST00000541102 ZBTB5O15062 677 aa16.5■□□□□ 0.23
LTBR-209ENST00000541102 CTAGE5O15320 804 aa16.5■□□□□ 0.23
LTBR-209ENST00000541102 CST5P28325 142 aaPredicted RBP16.5■□□□□ 0.23
LTBR-209ENST00000541102 SLC35G1Q2M3R5 365 aa16.5■□□□□ 0.23
LTBR-209ENST00000541102 BLOC1S2Q6QNY1 142 aa16.5■□□□□ 0.23
LTBR-209ENST00000541102 GLT1D1Q96MS3 346 aa16.5■□□□□ 0.23
LTBR-209ENST00000541102 TAAR1Q96RJ0 339 aa16.5■□□□□ 0.23
LTBR-209ENST00000541102 LARP6Q9BRS8 491 aaKnown RBP16.5■□□□□ 0.23
LTBR-209ENST00000541102 WDR11Q9BZH6 1224 aa16.5■□□□□ 0.23
LTBR-209ENST00000541102 BRPF3Q9ULD4 1205 aa16.5■□□□□ 0.23
LTBR-209ENST00000541102 GNEQ9Y223 722 aaKnown RBP16.5■□□□□ 0.23
LTBR-209ENST00000541102 PCDHA1Q9Y5I3 950 aa16.5■□□□□ 0.23
LTBR-209ENST00000541102 LCTP09848 1927 aa16.5■□□□□ 0.23
LTBR-209ENST00000541102 BAZ2BQ9UIF8 2168 aaKnown RBP16.5■□□□□ 0.23
LTBR-209ENST00000541102 LOC102724159A0A0B4J2E5 919 aa16.49■□□□□ 0.23
LTBR-209ENST00000541102 A0A1W2PPC1 479 aa16.49■□□□□ 0.23
LTBR-209ENST00000541102 B4DLN1 442 aa16.49■□□□□ 0.23
LTBR-209ENST00000541102 PPP1R11O60927 126 aaPredicted RBP16.49■□□□□ 0.23
LTBR-209ENST00000541102 CFBP00751 764 aa16.49■□□□□ 0.23
LTBR-209ENST00000541102 MRPL12P52815 198 aaKnown RBP16.49■□□□□ 0.23
LTBR-209ENST00000541102 PWP2Q15269 919 aaKnown RBP16.49■□□□□ 0.23
LTBR-209ENST00000541102 C1orf53Q5VUE5 145 aa16.49■□□□□ 0.23
LTBR-209ENST00000541102 Q6ZUG5 572 aa16.49■□□□□ 0.23
LTBR-209ENST00000541102 SH3RF1Q7Z6J0 888 aa16.49■□□□□ 0.23
LTBR-209ENST00000541102 ZNF654Q8IZM8 581 aa16.49■□□□□ 0.23
LTBR-209ENST00000541102 DNERQ8NFT8 737 aa16.49■□□□□ 0.23
LTBR-209ENST00000541102 MTMR8Q96EF0 704 aa16.49■□□□□ 0.23
LTBR-209ENST00000541102 TMEM87BQ96K49 555 aa16.49■□□□□ 0.23
LTBR-209ENST00000541102 C22orf23Q9BZE7 217 aa16.49■□□□□ 0.23
LTBR-209ENST00000541102 RIOX1Q9H6W3 641 aa16.49■□□□□ 0.23
LTBR-209ENST00000541102 COL20A1Q9P218 1284 aa16.49■□□□□ 0.23
LTBR-209ENST00000541102 CCDC69A6NI79 296 aa16.48■□□□□ 0.23
LTBR-209ENST00000541102 CYTH3O43739 400 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms