RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 CYB5R4Q7L1T6 521 aa16.97■□□□□ 0.31
MSRB3-209ENST00000540804 PPP1R13LQ8WUF5 828 aa16.97■□□□□ 0.31
MSRB3-209ENST00000540804 KAT14Q9H8E8 782 aa16.97■□□□□ 0.31
MSRB3-209ENST00000540804 VTA1Q9NP79 307 aa16.97■□□□□ 0.31
MSRB3-209ENST00000540804 TAF6LQ9Y6J9 622 aa16.97■□□□□ 0.31
MSRB3-209ENST00000540804 TIMP1P01033 207 aa16.96■□□□□ 0.31
MSRB3-209ENST00000540804 PTH1RQ03431 593 aa16.96■□□□□ 0.31
MSRB3-209ENST00000540804 CDC37Q16543 378 aaPredicted RBP16.96■□□□□ 0.31
MSRB3-209ENST00000540804 GPATCH4Q5T3I0 446 aaKnown RBP16.96■□□□□ 0.31
MSRB3-209ENST00000540804 C16orf59Q7L2K0 433 aa16.96■□□□□ 0.31
MSRB3-209ENST00000540804 IQCA1Q86XH1 822 aa16.96■□□□□ 0.31
MSRB3-209ENST00000540804 ADGRF4Q8IZF3 695 aa16.96■□□□□ 0.31
MSRB3-209ENST00000540804 ANKS1AQ92625 1134 aa16.96■□□□□ 0.31
MSRB3-209ENST00000540804 COPS5Q92905 334 aa16.96■□□□□ 0.31
MSRB3-209ENST00000540804 RNPC3Q96LT9 517 aaKnown RBP16.96■□□□□ 0.31
MSRB3-209ENST00000540804 VAT1LQ9HCJ6 419 aa16.96■□□□□ 0.31
MSRB3-209ENST00000540804 ADD3Q9UEY8 706 aaKnown RBP16.96■□□□□ 0.31
MSRB3-209ENST00000540804 STXBP5LQ9Y2K9 1186 aa16.96■□□□□ 0.31
MSRB3-209ENST00000540804 UMODL1Q5DID0 1318 aa16.96■□□□□ 0.3
MSRB3-209ENST00000540804 CD4P01730 458 aa16.95■□□□□ 0.3
MSRB3-209ENST00000540804 ACRP10323 421 aa16.95■□□□□ 0.3
MSRB3-209ENST00000540804 CSF2RAP15509 400 aa16.95■□□□□ 0.3
MSRB3-209ENST00000540804 CYP2C18P33260 490 aa16.95■□□□□ 0.3
MSRB3-209ENST00000540804 FAM109BQ6ICB4 259 aaPredicted RBP16.95■□□□□ 0.3
MSRB3-209ENST00000540804 STAG2Q8N3U4 1231 aa16.95■□□□□ 0.3
MSRB3-209ENST00000540804 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.95■□□□□ 0.3
MSRB3-209ENST00000540804 WDR11Q9BZH6 1224 aa16.95■□□□□ 0.3
MSRB3-209ENST00000540804 TRPV6Q9H1D0 765 aa16.95■□□□□ 0.3
MSRB3-209ENST00000540804 TTYH1Q9H313 450 aaPredicted RBP16.95■□□□□ 0.3
MSRB3-209ENST00000540804 CTNNA3Q9UI47 895 aa16.95■□□□□ 0.3
MSRB3-209ENST00000540804 WDR19Q8NEZ3 1342 aa16.95■□□□□ 0.3
MSRB3-209ENST00000540804 CHMLP26374 656 aa16.94■□□□□ 0.3
MSRB3-209ENST00000540804 ITGA7Q13683 1181 aa16.94■□□□□ 0.3
MSRB3-209ENST00000540804 DUSP28Q4G0W2 176 aa16.94■□□□□ 0.3
MSRB3-209ENST00000540804 ZNF697Q5TEC3 545 aa16.94■□□□□ 0.3
MSRB3-209ENST00000540804 MFSD5Q6N075 450 aa16.94■□□□□ 0.3
MSRB3-209ENST00000540804 SLC43A3Q8NBI5 491 aa16.94■□□□□ 0.3
MSRB3-209ENST00000540804 JMJD4Q9H9V9 463 aa16.94■□□□□ 0.3
MSRB3-209ENST00000540804 SENP2Q9HC62 589 aa16.94■□□□□ 0.3
MSRB3-209ENST00000540804 COL20A1Q9P218 1284 aa16.94■□□□□ 0.3
MSRB3-209ENST00000540804 MROH7Q68CQ1 1323 aa16.94■□□□□ 0.3
MSRB3-209ENST00000540804 LAMA4Q16363 1823 aa16.93■□□□□ 0.3
MSRB3-209ENST00000540804 RBM47A0AV96 593 aaKnown RBP16.93■□□□□ 0.3
MSRB3-209ENST00000540804 DHX16O60231 1041 aaKnown RBP16.93■□□□□ 0.3
MSRB3-209ENST00000540804 PDE4DQ08499 809 aa16.93■□□□□ 0.3
MSRB3-209ENST00000540804 SEC23AQ15436 765 aa16.93■□□□□ 0.3
MSRB3-209ENST00000540804 QRICH1Q2TAL8 776 aa16.93■□□□□ 0.3
MSRB3-209ENST00000540804 OR6J1Q8NGC5 347 aa16.93■□□□□ 0.3
MSRB3-209ENST00000540804 TAAR1Q96RJ0 339 aa16.93■□□□□ 0.3
MSRB3-209ENST00000540804 UBAC1Q9BSL1 405 aa16.93■□□□□ 0.3
MSRB3-209ENST00000540804 KRT23Q9C075 422 aa16.93■□□□□ 0.3
MSRB3-209ENST00000540804 SEMA6BQ9H3T3 888 aa16.93■□□□□ 0.3
MSRB3-209ENST00000540804 Q9Y3F1 56 aa16.93■□□□□ 0.3
MSRB3-209ENST00000540804 RBAK-RBAKDNI3L0D1 243 aa16.92■□□□□ 0.3
MSRB3-209ENST00000540804 TLR3O15455 904 aaKnown RBP16.92■□□□□ 0.3
MSRB3-209ENST00000540804 B4GALT4O60513 344 aa16.92■□□□□ 0.3
MSRB3-209ENST00000540804 ARIH2O95376 493 aa16.92■□□□□ 0.3
MSRB3-209ENST00000540804 MYL3P08590 195 aa16.92■□□□□ 0.3
MSRB3-209ENST00000540804 CYP21A2P08686 494 aa16.92■□□□□ 0.3
MSRB3-209ENST00000540804 PARP1P09874 1014 aaKnown RBP16.92■□□□□ 0.3
MSRB3-209ENST00000540804 EDNRBP24530 442 aa16.92■□□□□ 0.3
MSRB3-209ENST00000540804 SMAD3P84022 425 aaKnown RBP16.92■□□□□ 0.3
MSRB3-209ENST00000540804 ASPRV1Q53RT3 343 aa16.92■□□□□ 0.3
MSRB3-209ENST00000540804 CCDC178Q5BJE1 867 aa16.92■□□□□ 0.3
MSRB3-209ENST00000540804 TMEM240Q5SV17 173 aa16.92■□□□□ 0.3
MSRB3-209ENST00000540804 IFIT1BQ5T764 474 aaKnown RBP16.92■□□□□ 0.3
MSRB3-209ENST00000540804 CDX2Q99626 313 aaPredicted RBP16.92■□□□□ 0.3
MSRB3-209ENST00000540804 GRXCR1A8MXD5 290 aa16.91■□□□□ 0.3
MSRB3-209ENST00000540804 ZEB2O60315 1214 aa16.91■□□□□ 0.3
MSRB3-209ENST00000540804 CABYRO75952 493 aa16.91■□□□□ 0.3
MSRB3-209ENST00000540804 CCL23P55773 120 aa16.91■□□□□ 0.3
MSRB3-209ENST00000540804 SLC35G1Q2M3R5 365 aa16.91■□□□□ 0.3
MSRB3-209ENST00000540804 ZNF365Q70YC5 407 aa16.91■□□□□ 0.3
MSRB3-209ENST00000540804 CHST3Q7LGC8 479 aa16.91■□□□□ 0.3
MSRB3-209ENST00000540804 SYTL5Q8TDW5 730 aaPredicted RBP16.91■□□□□ 0.3
MSRB3-209ENST00000540804 MYLIPQ8WY64 445 aa16.91■□□□□ 0.3
MSRB3-209ENST00000540804 CNNM2Q9H8M5 875 aa16.91■□□□□ 0.3
MSRB3-209ENST00000540804 PPP1R11O60927 126 aaPredicted RBP16.9■□□□□ 0.3
MSRB3-209ENST00000540804 PURAQ00577 322 aaKnown RBP16.9■□□□□ 0.3
MSRB3-209ENST00000540804 STOX1Q6ZVD7 989 aa16.9■□□□□ 0.3
MSRB3-209ENST00000540804 SKAP1Q86WV1 359 aa16.9■□□□□ 0.3
MSRB3-209ENST00000540804 DNERQ8NFT8 737 aa16.9■□□□□ 0.3
MSRB3-209ENST00000540804 HIPK3Q9H422 1215 aa16.9■□□□□ 0.3
MSRB3-209ENST00000540804 TRMT13Q9NUP7 481 aaKnown RBP16.9■□□□□ 0.3
MSRB3-209ENST00000540804 MAD2L2Q9UI95 211 aa16.9■□□□□ 0.3
MSRB3-209ENST00000540804 ABCB11O95342 1321 aa16.9■□□□□ 0.3
MSRB3-209ENST00000540804 OPLAHO14841 1288 aa16.89■□□□□ 0.29
MSRB3-209ENST00000540804 TXNP10599 105 aaKnown RBP16.89■□□□□ 0.29
MSRB3-209ENST00000540804 CYP2C9P11712 490 aa16.89■□□□□ 0.29
MSRB3-209ENST00000540804 PBX2P40425 430 aa16.89■□□□□ 0.29
MSRB3-209ENST00000540804 PPIGQ13427 754 aaKnown RBP eCLIP16.89■□□□□ 0.29
MSRB3-209ENST00000540804 PPP2R5BQ15173 497 aa16.89■□□□□ 0.29
MSRB3-209ENST00000540804 FBXO11Q86XK2 927 aa16.89■□□□□ 0.29
MSRB3-209ENST00000540804 TMEM199Q8N511 208 aa16.89■□□□□ 0.29
MSRB3-209ENST00000540804 RGS22Q8NE09 1264 aa16.89■□□□□ 0.29
MSRB3-209ENST00000540804 SCLYQ96I15 445 aa16.89■□□□□ 0.29
MSRB3-209ENST00000540804 NOC4LQ9BVI4 516 aaKnown RBP16.89■□□□□ 0.29
MSRB3-209ENST00000540804 WNT8AQ9H1J5 351 aa16.89■□□□□ 0.29
MSRB3-209ENST00000540804 PNMA2Q9UL42 364 aa16.89■□□□□ 0.29
MSRB3-209ENST00000540804 RAD50Q92878 1312 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms