RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	TXNRD3	Q86VQ6	643 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	ERO1B	Q86YB8	467 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	GOLGA6L1	Q8N7Z2	621 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	SLC26A6	Q9BXS9	759 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	PSD3	Q9NYI0	1048 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	JRKL	Q9Y4A0	524 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	SCN7A	Q01118	1682 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	LOC102724159	A0A0B4J2E5	919 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783		B4E1Z4	1266 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	ERLIN1	O75477	346 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	EIF3J	O75822	258 aa	Known RBP	6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	KLRK1	P26718	216 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	GUCY1A2	P33402	732 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	DYNLL1	P63167	89 aa	Known RBP	6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	PWP2	Q15269	919 aa	Known RBP	6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	DEFB115	Q30KQ5	88 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	ICE2	Q659A1	982 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	DHX37	Q8IY37	1157 aa	Known RBP	6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	GSPT2	Q8IYD1	628 aa	Known RBP	6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	GPATCH11	Q8N954	259 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CDCA5	Q96FF9	252 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	IDI2	Q9BXS1	227 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	NMRK2	Q9NPI5	230 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	TRIM10	Q9UDY6	481 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	SHANK3	Q9BYB0	1731 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CTAGE15	A4D2H0	777 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CTAGE9	A4FU28	777 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	GOLGA8A	A7E2F4	631 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	IVL	P07476	585 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CTAGE8	P0CG41	777 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	ZNF18	P17022	549 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	SLC1A4	P43007	532 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	MDM2	Q00987	491 aa	Predicted RBP	6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	TFAP4	Q01664	338 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	NR1I3	Q14994	352 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	SLC4A8	Q2Y0W8	1093 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CTAGE6	Q86UF2	777 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	FAM160B2	Q86V87	743 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CTAGE4	Q8IX94	777 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CEP112	Q8N8E3	955 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	KRI1	Q8N9T8	703 aa	Known RBP	6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	PRMT6	Q96LA8	375 aa	Predicted RBP	6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	STRBP	Q96SI9	672 aa	Known RBP	6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	SLF1	Q9BQI6	1058 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	ZFYVE28	Q9HCC9	887 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	RBM28	Q9NW13	759 aa	Known RBP	6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	HDAC6	Q9UBN7	1215 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	HOOK1	Q9UJC3	728 aa	Known RBP	6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	RNF225	M0QZC1	329 aa	Predicted RBP	6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	SRGAP2	O75044	1071 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	PPP6R2	O75170	966 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	PARP1	P09874	1014 aa	Known RBP	6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	FXR1	P51114	621 aa	Known RBP eCLIP	6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	SBK1	Q52WX2	424 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	NOM1	Q5C9Z4	860 aa	Known RBP	6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CAPZA3	Q96KX2	299 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	PARK7	Q99497	189 aa	Known RBP	6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	BIN2	Q9UBW5	565 aa	Predicted RBP	6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CA12	O43570	354 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	RNF40	O75150	1001 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	MAGEA9	P43362	315 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	MRPS25	P82663	173 aa	Known RBP	6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	NR5A1	Q13285	461 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	TTC19	Q6DKK2	380 aa	Predicted RBP	6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	TBC1D10C	Q8IV04	446 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	LCORL	Q8N3X6	602 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	SDR42E1	Q8WUS8	393 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	GLIS2	Q9BZE0	524 aa	Predicted RBP	6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	EHD4	Q9H223	541 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	GUCA1B	Q9UMX6	200 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	PCDHB6	Q9Y5E3	794 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	NUP188	Q5SRE5	1749 aa		6.34	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	GAK	O14976	1311 aa		6.34	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	USP17L10	C9JJH3	530 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	TTLL1	O95922	423 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	CD44	P16070	742 aa	Known RBP	6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	FKBP15	Q5T1M5	1219 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	GPATCH4	Q5T3I0	446 aa	Known RBP	6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	MCTP2	Q6DN12	878 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	SCYL3	Q8IZE3	742 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	MICALL1	Q8N3F8	863 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	CCDC148	Q8NFR7	591 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ENOX1	Q8TC92	643 aa	Known RBP	6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ZKSCAN3	Q9BRR0	538 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	MTA3	Q9BTC8	594 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	RAB21	Q9UL25	225 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	CXCL11	O14625	94 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ZBTB43	O43298	467 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	TOB1	P50616	345 aa	Predicted RBP	6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	PLS1	Q14651	629 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	RCSD1	Q6JBY9	416 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	MIGA2	Q7L4E1	593 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	IQUB	Q8NA54	791 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	HNRNPLL	Q8WVV9	542 aa	Known RBP	6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	MXD3	Q9BW11	206 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	NBPF3	Q9H094	633 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	VPS16	Q9H269	839 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	DCP1A	Q9NPI6	582 aa	Predicted RBP	6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ZHX2	Q9Y6X8	837 aa		6.33	□□□□□ -1.4

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