RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 MUM1L1Q5H9M0 696 aa12.1□□□□□ -0.47
CDCA3-208ENST00000540683 TTBK2Q6IQ55 1244 aa12.1□□□□□ -0.47
CDCA3-208ENST00000540683 TLK2Q86UE8 772 aa12.1□□□□□ -0.47
CDCA3-208ENST00000540683 FBXO11Q86XK2 927 aa12.1□□□□□ -0.47
CDCA3-208ENST00000540683 NSUN6Q8TEA1 469 aaKnown RBP12.1□□□□□ -0.47
CDCA3-208ENST00000540683 SCFD2Q8WU76 684 aa12.1□□□□□ -0.47
CDCA3-208ENST00000540683 ZKSCAN3Q9BRR0 538 aa12.1□□□□□ -0.47
CDCA3-208ENST00000540683 AMNQ9BXJ7 453 aa12.1□□□□□ -0.47
CDCA3-208ENST00000540683 MTIF3Q9H2K0 278 aaKnown RBP12.1□□□□□ -0.47
CDCA3-208ENST00000540683 TMEM39AQ9NV64 488 aa12.1□□□□□ -0.47
CDCA3-208ENST00000540683 SOWAHBA6NEL2 793 aa12.09□□□□□ -0.47
CDCA3-208ENST00000540683 IFIT3O14879 490 aaKnown RBP12.09□□□□□ -0.47
CDCA3-208ENST00000540683 KIAA0355O15063 1070 aa12.09□□□□□ -0.47
CDCA3-208ENST00000540683 SGSM2O43147 1006 aa12.09□□□□□ -0.47
CDCA3-208ENST00000540683 PQBP1O60828 265 aaKnown RBP12.09□□□□□ -0.47
CDCA3-208ENST00000540683 GSPT1P15170 499 aaKnown RBP12.09□□□□□ -0.47
CDCA3-208ENST00000540683 CALML3P27482 149 aa12.09□□□□□ -0.47
CDCA3-208ENST00000540683 PDE4AP27815 886 aa12.09□□□□□ -0.47
CDCA3-208ENST00000540683 KIF5BP33176 963 aa12.09□□□□□ -0.47
CDCA3-208ENST00000540683 GNAQP50148 359 aa12.09□□□□□ -0.47
CDCA3-208ENST00000540683 WTAPQ15007 396 aa12.09□□□□□ -0.47
CDCA3-208ENST00000540683 CDC37Q16543 378 aaPredicted RBP12.09□□□□□ -0.47
CDCA3-208ENST00000540683 DUSP28Q4G0W2 176 aa12.09□□□□□ -0.47
CDCA3-208ENST00000540683 CATIPQ7Z7H3 387 aa12.09□□□□□ -0.47
CDCA3-208ENST00000540683 ADGRF4Q8IZF3 695 aa12.09□□□□□ -0.47
CDCA3-208ENST00000540683 PLCD3Q8N3E9 789 aa12.09□□□□□ -0.47
CDCA3-208ENST00000540683 CHMP4CQ96CF2 233 aa12.09□□□□□ -0.47
CDCA3-208ENST00000540683 LZTS2Q9BRK4 669 aa12.09□□□□□ -0.47
CDCA3-208ENST00000540683 PDLIM7Q9NR12 457 aa12.09□□□□□ -0.47
CDCA3-208ENST00000540683 ARVCFO00192 962 aa12.08□□□□□ -0.48
CDCA3-208ENST00000540683 SUPT20HL2P0C7V6 817 aa12.08□□□□□ -0.48
CDCA3-208ENST00000540683 CALM1P0DP23 149 aa12.08□□□□□ -0.48
CDCA3-208ENST00000540683 CALM2P0DP24 149 aa12.08□□□□□ -0.48
CDCA3-208ENST00000540683 CALM3P0DP25 149 aa12.08□□□□□ -0.48
CDCA3-208ENST00000540683 RPS6P62753 249 aaKnown RBP12.08□□□□□ -0.48
CDCA3-208ENST00000540683 FPGSQ05932 587 aa12.08□□□□□ -0.48
CDCA3-208ENST00000540683 PPIGQ13427 754 aaKnown RBP eCLIP12.08□□□□□ -0.481e-6■■■■□ 25.5
CDCA3-208ENST00000540683 TTLL4Q14679 1199 aa12.08□□□□□ -0.48
CDCA3-208ENST00000540683 PPP2R5BQ15173 497 aa12.08□□□□□ -0.48
CDCA3-208ENST00000540683 FAM109BQ6ICB4 259 aaPredicted RBP12.08□□□□□ -0.48
CDCA3-208ENST00000540683 CCSAPQ6IQ19 270 aaPredicted RBP12.08□□□□□ -0.48
CDCA3-208ENST00000540683 KCNV1Q6PIU1 500 aa12.08□□□□□ -0.48
CDCA3-208ENST00000540683 TMEM199Q8N511 208 aa12.08□□□□□ -0.48
CDCA3-208ENST00000540683 SPRYD3Q8NCJ5 442 aa12.08□□□□□ -0.48
CDCA3-208ENST00000540683 MAP4K1Q92918 833 aa12.08□□□□□ -0.48
CDCA3-208ENST00000540683 FGD4Q96M96 766 aa12.08□□□□□ -0.48
CDCA3-208ENST00000540683 MAP3K14Q99558 947 aa12.08□□□□□ -0.48
CDCA3-208ENST00000540683 WDR11Q9BZH6 1224 aa12.08□□□□□ -0.48
CDCA3-208ENST00000540683 GNEQ9Y223 722 aaKnown RBP12.08□□□□□ -0.48
CDCA3-208ENST00000540683 MCM3APO60318 1980 aa12.08□□□□□ -0.48
CDCA3-208ENST00000540683 RBM47A0AV96 593 aaKnown RBP12.07□□□□□ -0.48
CDCA3-208ENST00000540683 KLRF2D3W0D1 207 aa12.07□□□□□ -0.48
CDCA3-208ENST00000540683 NFIBO00712 420 aa12.07□□□□□ -0.48
CDCA3-208ENST00000540683 ZBTB5O15062 677 aa12.07□□□□□ -0.48
CDCA3-208ENST00000540683 DYNC1LI2O43237 492 aaPredicted RBP12.07□□□□□ -0.48
CDCA3-208ENST00000540683 GOLGA8HP0CJ92 632 aa12.07□□□□□ -0.48
CDCA3-208ENST00000540683 MCM5P33992 734 aa12.07□□□□□ -0.48
CDCA3-208ENST00000540683 SNAP25P60880 206 aa12.07□□□□□ -0.48
CDCA3-208ENST00000540683 IRX6P78412 446 aaPredicted RBP12.07□□□□□ -0.48
CDCA3-208ENST00000540683 STXBP2Q15833 593 aa12.07□□□□□ -0.48
CDCA3-208ENST00000540683 USH1GQ495M9 461 aa12.07□□□□□ -0.48
CDCA3-208ENST00000540683 BMP2KLQ5H9B9 411 aa12.07□□□□□ -0.48
CDCA3-208ENST00000540683 CTCFLQ8NI51 663 aaPredicted RBP12.07□□□□□ -0.48
CDCA3-208ENST00000540683 CLEC4DQ8WXI8 215 aa12.07□□□□□ -0.48
CDCA3-208ENST00000540683 TMEM87BQ96K49 555 aa12.07□□□□□ -0.48
CDCA3-208ENST00000540683 KATNBL1Q9H079 304 aa12.07□□□□□ -0.48
CDCA3-208ENST00000540683 MYH6P13533 1939 aa12.07□□□□□ -0.48
CDCA3-208ENST00000540683 E7EWF7 191 aa12.06□□□□□ -0.48
CDCA3-208ENST00000540683 DDAH1O94760 285 aa12.06□□□□□ -0.48
CDCA3-208ENST00000540683 TIMP1P01033 207 aa12.06□□□□□ -0.48
CDCA3-208ENST00000540683 CYP21A2P08686 494 aa12.06□□□□□ -0.48
CDCA3-208ENST00000540683 EDNRBP24530 442 aa12.06□□□□□ -0.48
CDCA3-208ENST00000540683 SMARCA1P28370 1054 aa12.06□□□□□ -0.48
CDCA3-208ENST00000540683 C1QBPQ07021 282 aaKnown RBP12.06□□□□□ -0.48
CDCA3-208ENST00000540683 SEC23AQ15436 765 aa12.06□□□□□ -0.48
CDCA3-208ENST00000540683 TMEM67Q5HYA8 995 aa12.06□□□□□ -0.48
CDCA3-208ENST00000540683 TAPT1Q6NXT6 567 aa12.06□□□□□ -0.48
CDCA3-208ENST00000540683 SYNE3Q6ZMZ3 975 aa12.06□□□□□ -0.48
CDCA3-208ENST00000540683 TEX2Q8IWB9 1127 aa12.06□□□□□ -0.48
CDCA3-208ENST00000540683 FBXO16Q8IX29 292 aaPredicted RBP12.06□□□□□ -0.48
CDCA3-208ENST00000540683 RMDN3Q96TC7 470 aa12.06□□□□□ -0.48
CDCA3-208ENST00000540683 UBA5Q9GZZ9 404 aa12.06□□□□□ -0.48
CDCA3-208ENST00000540683 SEC63Q9UGP8 760 aaKnown RBP12.06□□□□□ -0.48
CDCA3-208ENST00000540683 TMEM265A0A087WTH1 108 aa12.05□□□□□ -0.48
CDCA3-208ENST00000540683 EIF3JO75822 258 aaKnown RBP12.05□□□□□ -0.48
CDCA3-208ENST00000540683 STAM2O75886 525 aa12.05□□□□□ -0.48
CDCA3-208ENST00000540683 NEFLP07196 543 aa12.05□□□□□ -0.48
CDCA3-208ENST00000540683 SMPD1P17405 629 aa12.05□□□□□ -0.48
CDCA3-208ENST00000540683 CDK7P50613 346 aa12.05□□□□□ -0.48
CDCA3-208ENST00000540683 SMAD3P84022 425 aaKnown RBP12.05□□□□□ -0.48
CDCA3-208ENST00000540683 PTPN11Q06124 597 aaPredicted RBP12.05□□□□□ -0.48
CDCA3-208ENST00000540683 ITGA7Q13683 1181 aa12.05□□□□□ -0.48
CDCA3-208ENST00000540683 GRM4Q14833 912 aa12.05□□□□□ -0.48
CDCA3-208ENST00000540683 QRICH1Q2TAL8 776 aa12.05□□□□□ -0.48
CDCA3-208ENST00000540683 ARHGEF16Q5VV41 709 aa12.05□□□□□ -0.48
CDCA3-208ENST00000540683 PSRC1Q6PGN9 363 aaPredicted RBP12.05□□□□□ -0.48
CDCA3-208ENST00000540683 EEPD1Q7L9B9 569 aa12.05□□□□□ -0.48
CDCA3-208ENST00000540683 OR6J1Q8NGC5 347 aa12.05□□□□□ -0.48
CDCA3-208ENST00000540683 BADQ92934 168 aa12.05□□□□□ -0.48
CDCA3-208ENST00000540683 CUL5Q93034 780 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms