RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 GOLGA6L1Q8N7Z2 621 aa13.71□□□□□ -0.21
NPC1-202ENST00000540608 CAGE1Q8TC20 777 aa13.71□□□□□ -0.21
NPC1-202ENST00000540608 PCMTD1Q96MG8 357 aaPredicted RBP13.71□□□□□ -0.21
NPC1-202ENST00000540608 SETDB2Q96T68 719 aa13.71□□□□□ -0.21
NPC1-202ENST00000540608 ANKRD2Q9GZV1 360 aa13.71□□□□□ -0.21
NPC1-202ENST00000540608 RASSF4Q9H2L5 321 aa13.71□□□□□ -0.21
NPC1-202ENST00000540608 DUSP10Q9Y6W6 482 aa13.71□□□□□ -0.21
NPC1-202ENST00000540608 ZC3H4Q9UPT8 1303 aaKnown RBP13.71□□□□□ -0.21
NPC1-202ENST00000540608 ZNF831Q5JPB2 1677 aa13.71□□□□□ -0.21
NPC1-202ENST00000540608 PALM3A6NDB9 673 aaPredicted RBP13.71□□□□□ -0.21
NPC1-202ENST00000540608 PDE2AO00408 941 aaPredicted RBP13.71□□□□□ -0.21
NPC1-202ENST00000540608 IDEP14735 1019 aa13.71□□□□□ -0.21
NPC1-202ENST00000540608 TXNRD1Q16881 649 aa13.71□□□□□ -0.21
NPC1-202ENST00000540608 LRRC31Q6UY01 552 aa13.71□□□□□ -0.21
NPC1-202ENST00000540608 BBXQ8WY36 941 aaPredicted RBP13.71□□□□□ -0.21
NPC1-202ENST00000540608 SECISBP2LQ93073 1101 aaKnown RBP13.71□□□□□ -0.21
NPC1-202ENST00000540608 LZTS2Q9BRK4 669 aa13.71□□□□□ -0.21
NPC1-202ENST00000540608 NARFQ9UHQ1 456 aa13.71□□□□□ -0.21
NPC1-202ENST00000540608 ZNF185O15231 689 aa13.71□□□□□ -0.22
NPC1-202ENST00000540608 OR52Z1P0C646 297 aa13.71□□□□□ -0.22
NPC1-202ENST00000540608 HNRNPH3P31942 346 aaKnown RBP13.71□□□□□ -0.22
NPC1-202ENST00000540608 AMPD3Q01432 767 aa13.71□□□□□ -0.22
NPC1-202ENST00000540608 CYP27A1Q02318 531 aa13.71□□□□□ -0.22
NPC1-202ENST00000540608 SPA17Q15506 151 aa13.71□□□□□ -0.22
NPC1-202ENST00000540608 FKBP15Q5T1M5 1219 aa13.71□□□□□ -0.22
NPC1-202ENST00000540608 SPTY2D1Q68D10 685 aaPredicted RBP13.71□□□□□ -0.22
NPC1-202ENST00000540608 AMIGO3Q86WK7 504 aa13.71□□□□□ -0.22
NPC1-202ENST00000540608 AFAP1L1Q8TED9 768 aa13.71□□□□□ -0.22
NPC1-202ENST00000540608 DYNLL2Q96FJ2 89 aa13.71□□□□□ -0.22
NPC1-202ENST00000540608 EEF2KMTQ96G04 330 aa13.71□□□□□ -0.22
NPC1-202ENST00000540608 CCDC42Q96M95 316 aa13.71□□□□□ -0.22
NPC1-202ENST00000540608 NYXQ9GZU5 481 aa13.71□□□□□ -0.22
NPC1-202ENST00000540608 MKNK2Q9HBH9 465 aa13.71□□□□□ -0.22
NPC1-202ENST00000540608 JADE2Q9NQC1 790 aa13.71□□□□□ -0.22
NPC1-202ENST00000540608 USP17L3A6NCW0 530 aa13.7□□□□□ -0.22
NPC1-202ENST00000540608 USP17L4A6NCW7 530 aa13.7□□□□□ -0.22
NPC1-202ENST00000540608 ASIC1P78348 528 aa13.7□□□□□ -0.22
NPC1-202ENST00000540608 USP17L1Q7RTZ2 530 aa13.7□□□□□ -0.22
NPC1-202ENST00000540608 FNBP4Q8N3X1 1017 aaPredicted RBP13.7□□□□□ -0.22
NPC1-202ENST00000540608 ZMYND12Q9H0C1 365 aa13.7□□□□□ -0.22
NPC1-202ENST00000540608 JRKLQ9Y4A0 524 aa13.7□□□□□ -0.22
NPC1-202ENST00000540608 MACROD2A1Z1Q3 448 aa13.7□□□□□ -0.22
NPC1-202ENST00000540608 TRIM66O15016 1216 aa13.7□□□□□ -0.22
NPC1-202ENST00000540608 TM4SF1P30408 202 aa13.7□□□□□ -0.22
NPC1-202ENST00000540608 CNNM4Q6P4Q7 775 aa13.7□□□□□ -0.22
NPC1-202ENST00000540608 FOXR1Q6PIV2 292 aa13.7□□□□□ -0.22
NPC1-202ENST00000540608 KRT25Q7Z3Z0 450 aa13.7□□□□□ -0.22
NPC1-202ENST00000540608 DZIP1Q86YF9 867 aaKnown RBP13.7□□□□□ -0.22
NPC1-202ENST00000540608 MAST2Q6P0Q8 1798 aa13.69□□□□□ -0.22
NPC1-202ENST00000540608 IRS2Q9Y4H2 1338 aa13.69□□□□□ -0.22
NPC1-202ENST00000540608 ZNF263O14978 683 aa13.69□□□□□ -0.22
NPC1-202ENST00000540608 USO1O60763 962 aaKnown RBP13.69□□□□□ -0.22
NPC1-202ENST00000540608 ZMYND10O75800 440 aa13.69□□□□□ -0.22
NPC1-202ENST00000540608 TSPY3P0CV98 308 aa13.69□□□□□ -0.22
NPC1-202ENST00000540608 TSPY8P0CW00 308 aa13.69□□□□□ -0.22
NPC1-202ENST00000540608 FCER1AP12319 257 aa13.69□□□□□ -0.22
NPC1-202ENST00000540608 PRLRP16471 622 aa13.69□□□□□ -0.22
NPC1-202ENST00000540608 ZNF572Q7Z3I7 529 aaPredicted RBP13.69□□□□□ -0.22
NPC1-202ENST00000540608 CREG2Q8IUH2 290 aa13.69□□□□□ -0.22
NPC1-202ENST00000540608 C10orf67Q8IYJ2 551 aa13.69□□□□□ -0.22
NPC1-202ENST00000540608 MMGT1Q8N4V1 131 aa13.69□□□□□ -0.22
NPC1-202ENST00000540608 TRIM58Q8NG06 486 aa13.69□□□□□ -0.22
NPC1-202ENST00000540608 LRWD1Q9UFC0 647 aa13.69□□□□□ -0.22
NPC1-202ENST00000540608 SNX12Q9UMY4 172 aa13.69□□□□□ -0.22
NPC1-202ENST00000540608 PLAGL2Q9UPG8 496 aa13.69□□□□□ -0.22
NPC1-202ENST00000540608 CCDC88AQ3V6T2 1871 aa13.69□□□□□ -0.22
NPC1-202ENST00000540608 ROBO3Q96MS0 1386 aa13.69□□□□□ -0.22
NPC1-202ENST00000540608 GNPATO15228 680 aa13.69□□□□□ -0.22
NPC1-202ENST00000540608 CCNT1O60563 726 aaKnown RBP13.69□□□□□ -0.22
NPC1-202ENST00000540608 ITIH3Q06033 890 aa13.69□□□□□ -0.22
NPC1-202ENST00000540608 CCDC70Q6NSX1 233 aa13.69□□□□□ -0.22
NPC1-202ENST00000540608 ZNF444Q8N0Y2 327 aaPredicted RBP13.69□□□□□ -0.22
NPC1-202ENST00000540608 TMEM47Q9BQJ4 181 aa13.69□□□□□ -0.22
NPC1-202ENST00000540608 CRACR2AQ9BSW2 395 aa13.69□□□□□ -0.22
NPC1-202ENST00000540608 SELENOOQ9BVL4 669 aa13.69□□□□□ -0.22
NPC1-202ENST00000540608 SEMA6BQ9H3T3 888 aa13.69□□□□□ -0.22
NPC1-202ENST00000540608 TACC1O75410 805 aa13.68□□□□□ -0.22
NPC1-202ENST00000540608 RPS6KA4O75676 772 aa13.68□□□□□ -0.22
NPC1-202ENST00000540608 GGCXP38435 758 aa13.68□□□□□ -0.22
NPC1-202ENST00000540608 NONOQ15233 471 aaKnown RBP eCLIP13.68□□□□□ -0.22
NPC1-202ENST00000540608 LETM2Q2VYF4 491 aa13.68□□□□□ -0.22
NPC1-202ENST00000540608 VWA3BQ502W6 1294 aa13.68□□□□□ -0.22
NPC1-202ENST00000540608 CENPPQ6IPU0 288 aa13.68□□□□□ -0.22
NPC1-202ENST00000540608 PCDHA13Q9Y5I0 950 aa13.68□□□□□ -0.22
NPC1-202ENST00000540608 COL24A1Q17RW2 1714 aa13.68□□□□□ -0.22
NPC1-202ENST00000540608 MYH1P12882 1939 aa13.68□□□□□ -0.22
NPC1-202ENST00000540608 AGPSO00116 658 aa13.68□□□□□ -0.22
NPC1-202ENST00000540608 RGL2O15211 777 aa13.68□□□□□ -0.22
NPC1-202ENST00000540608 ZPR1O75312 459 aa13.68□□□□□ -0.22
NPC1-202ENST00000540608 LCA5LO95447 670 aa13.68□□□□□ -0.22
NPC1-202ENST00000540608 MYBL2P10244 700 aa13.68□□□□□ -0.22
NPC1-202ENST00000540608 HSPA1LP34931 641 aa13.68□□□□□ -0.22
NPC1-202ENST00000540608 C2orf54Q08AI8 447 aa13.68□□□□□ -0.22
NPC1-202ENST00000540608 CCDC96Q2M329 555 aa13.68□□□□□ -0.22
NPC1-202ENST00000540608 TPTE2Q6XPS3 522 aa13.68□□□□□ -0.22
NPC1-202ENST00000540608 AMOTL1Q8IY63 956 aa13.68□□□□□ -0.22
NPC1-202ENST00000540608 KIAA0895Q8NCT3 520 aa13.68□□□□□ -0.22
NPC1-202ENST00000540608 RUBCNQ92622 972 aa13.68□□□□□ -0.22
NPC1-202ENST00000540608 SPZ1Q9BXG8 430 aa13.68□□□□□ -0.22
NPC1-202ENST00000540608 KLRF2D3W0D1 207 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms