RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 MTHFSDQ2M296 383 aaKnown RBP10.44□□□□□ -0.74
CLIP1-214ENST00000540539 TWISTNBQ3B726 338 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-214ENST00000540539 SAMD3Q8N6K7 520 aa10.44□□□□□ -0.74
CLIP1-214ENST00000540539 POLR3CQ9BUI4 534 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-214ENST00000540539 MOV10L1Q9BXT6 1211 aaKnown RBP10.44□□□□□ -0.74
CLIP1-214ENST00000540539 RABL2BQ9UNT1 228 aa10.44□□□□□ -0.74
CLIP1-214ENST00000540539 ITM2BQ9Y287 266 aa10.44□□□□□ -0.74
CLIP1-214ENST00000540539 hCG_2014768A0A024R1R8 64 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-214ENST00000540539 CCT8L1PA6NM43 557 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 TRIM37O94972 964 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 HOXD12P35452 270 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 CLCN2P51788 898 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 KCNJ2P63252 427 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 PPARDQ03181 441 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 STK3Q13188 491 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 CLPPQ16740 277 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-214ENST00000540539 P3H1Q32P28 736 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 SEPT14Q6ZU15 432 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 APBB1IPQ7Z5R6 666 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-214ENST00000540539 PALB2Q86YC2 1186 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 HELBQ8NG08 1087 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-214ENST00000540539 ERMNQ8TAM6 284 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 LZICQ8WZA0 190 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 RPGRIP1Q96KN7 1286 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 TCEANC2Q96MN5 208 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 PCDHA7Q9UN72 937 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 FRMD4BQ9Y2L6 1034 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.43□□□□□ -0.74
CLIP1-214ENST00000540539 SPATA31A1Q5TZJ5 1347 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 A8MUI8 341 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 AKR1B15C9JRZ8 316 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-214ENST00000540539 NDUFB5O43674 189 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 USO1O60763 962 aaKnown RBP10.43□□□□□ -0.74
CLIP1-214ENST00000540539 IL2RBP14784 551 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 GSTT1P30711 240 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 PCK1P35558 622 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 PTH1RQ03431 593 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 KLC1Q07866 573 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 EZH2Q15910 746 aaKnown RBP10.43□□□□□ -0.74
CLIP1-214ENST00000540539 GKAP1Q5VSY0 366 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-214ENST00000540539 CEP128Q6ZU80 1094 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 INIPQ9NRY2 104 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 LRRC42Q9Y546 428 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 SPO11Q9Y5K1 396 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 SPATA31A5Q5VU36 1347 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 SPATA31A7Q8IWB4 1347 aa10.43□□□□□ -0.74
CLIP1-214ENST00000540539 PARP4Q9UKK3 1724 aaKnown RBP10.42□□□□□ -0.74
CLIP1-214ENST00000540539 PDE2AO00408 941 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-214ENST00000540539 HNRNPRO43390 633 aaKnown RBP10.42□□□□□ -0.74
CLIP1-214ENST00000540539 HPDP32754 393 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-214ENST00000540539 EPHB4P54760 987 aa10.42□□□□□ -0.74
CLIP1-214ENST00000540539 MECOMQ03112 1051 aa10.42□□□□□ -0.74
CLIP1-214ENST00000540539 IFI16Q16666 785 aaKnown RBP10.42□□□□□ -0.74
CLIP1-214ENST00000540539 EMBQ6PCB8 327 aa10.42□□□□□ -0.74
CLIP1-214ENST00000540539 DDX27Q96GQ7 796 aaKnown RBP10.42□□□□□ -0.74
CLIP1-214ENST00000540539 ATP6V1G3Q96LB4 118 aa10.42□□□□□ -0.74
CLIP1-214ENST00000540539 DMGDHQ9UI17 866 aaKnown RBP10.42□□□□□ -0.74
CLIP1-214ENST00000540539 EFR3BQ9Y2G0 817 aa10.42□□□□□ -0.74
CLIP1-214ENST00000540539 ATP1A1P05023 1023 aaKnown RBP10.42□□□□□ -0.74
CLIP1-214ENST00000540539 STIP1P31948 543 aaKnown RBP10.42□□□□□ -0.74
CLIP1-214ENST00000540539 CKAP4Q07065 602 aaKnown RBP10.42□□□□□ -0.74
CLIP1-214ENST00000540539 C2orf54Q08AI8 447 aa10.42□□□□□ -0.74
CLIP1-214ENST00000540539 KIF5AQ12840 1032 aa10.42□□□□□ -0.74
CLIP1-214ENST00000540539 VPS72Q15906 364 aa10.42□□□□□ -0.74
CLIP1-214ENST00000540539 PUS10Q3MIT2 529 aaKnown RBP10.42□□□□□ -0.74
CLIP1-214ENST00000540539 SESTD1Q86VW0 696 aa10.42□□□□□ -0.74
CLIP1-214ENST00000540539 CCDC65Q8IXS2 484 aa10.42□□□□□ -0.74
CLIP1-214ENST00000540539 IQCKQ8N0W5 287 aa10.42□□□□□ -0.74
CLIP1-214ENST00000540539 C8orf58Q8NAV2 365 aa10.42□□□□□ -0.74
CLIP1-214ENST00000540539 TAF4BQ92750 862 aa10.42□□□□□ -0.74
CLIP1-214ENST00000540539 AZIN2Q96A70 460 aa10.42□□□□□ -0.74
CLIP1-214ENST00000540539 MPHOSPH6Q99547 160 aaKnown RBP10.42□□□□□ -0.74
CLIP1-214ENST00000540539 NAA15Q9BXJ9 866 aaKnown RBP10.42□□□□□ -0.74
CLIP1-214ENST00000540539 SIL1Q9H173 461 aa10.42□□□□□ -0.74
CLIP1-214ENST00000540539 SAR1BQ9Y6B6 198 aa10.42□□□□□ -0.74
CLIP1-214ENST00000540539 CEMIPQ8WUJ3 1361 aa10.41□□□□□ -0.74
CLIP1-214ENST00000540539 TRIM43BA6NCK2 446 aa10.41□□□□□ -0.74
CLIP1-214ENST00000540539 ATP9BO43861 1147 aa10.41□□□□□ -0.74
CLIP1-214ENST00000540539 NQO1P15559 274 aaKnown RBP10.41□□□□□ -0.74
CLIP1-214ENST00000540539 ATP6V1C1P21283 382 aa10.41□□□□□ -0.74
CLIP1-214ENST00000540539 SEPT2Q15019 361 aa10.41□□□□□ -0.74
CLIP1-214ENST00000540539 FKBP15Q5T1M5 1219 aa10.41□□□□□ -0.74
CLIP1-214ENST00000540539 TCERG1LQ5VWI1 586 aa10.41□□□□□ -0.74
CLIP1-214ENST00000540539 LONP2Q86WA8 852 aa10.41□□□□□ -0.74
CLIP1-214ENST00000540539 HS6ST3Q8IZP7 471 aa10.41□□□□□ -0.74
CLIP1-214ENST00000540539 TRIML1Q8N9V2 468 aa10.41□□□□□ -0.74
CLIP1-214ENST00000540539 NSUN7Q8NE18 718 aaKnown RBP10.41□□□□□ -0.74
CLIP1-214ENST00000540539 CAVIN3Q969G5 261 aa10.41□□□□□ -0.74
CLIP1-214ENST00000540539 ADAM22Q9P0K1 906 aa10.41□□□□□ -0.74
CLIP1-214ENST00000540539 SLC12A6Q9UHW9 1150 aa10.41□□□□□ -0.74
CLIP1-214ENST00000540539 AGAP1Q9UPQ3 857 aa10.41□□□□□ -0.74
CLIP1-214ENST00000540539 SH3GLB1Q9Y371 365 aa10.41□□□□□ -0.74
CLIP1-214ENST00000540539 N6AMT1Q9Y5N5 214 aa10.41□□□□□ -0.74
CLIP1-214ENST00000540539 OVOS2A0A0G2JMS6 1433 aa10.41□□□□□ -0.74
CLIP1-214ENST00000540539 AOX1Q06278 1338 aa10.41□□□□□ -0.74
CLIP1-214ENST00000540539 HNRNPCP07910 306 aaKnown RBP eCLIP10.41□□□□□ -0.74
CLIP1-214ENST00000540539 NAT2P11245 290 aa10.41□□□□□ -0.74
CLIP1-214ENST00000540539 ADALQ6DHV7 355 aa10.41□□□□□ -0.74
CLIP1-214ENST00000540539 DUS1LQ6P1R4 473 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms