RNA–Protein interactions for RNA: ENST00000540091.1

SPPL3-205, Transcript of signal peptide peptidase like 3, humanhuman

TSL 4

Gene SPPL3, Length 531 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-205ENST00000540091 HMX2A2RU54 273 aa6.5□□□□□ -1.37
SPPL3-205ENST00000540091 RAB6AP20340 208 aa6.5□□□□□ -1.37
SPPL3-205ENST00000540091 PIP4K2AP48426 406 aaPredicted RBP6.5□□□□□ -1.37
SPPL3-205ENST00000540091 LIG3P49916 1009 aa6.5□□□□□ -1.37
SPPL3-205ENST00000540091 PRELPP51888 382 aa6.5□□□□□ -1.37
SPPL3-205ENST00000540091 CALD1Q05682 793 aaKnown RBP6.5□□□□□ -1.37
SPPL3-205ENST00000540091 HLFQ16534 295 aa6.5□□□□□ -1.37
SPPL3-205ENST00000540091 CPSF6Q16630 551 aaKnown RBP eCLIP6.5□□□□□ -1.37
SPPL3-205ENST00000540091 ZC3H12AQ5D1E8 599 aaKnown RBP6.5□□□□□ -1.37
SPPL3-205ENST00000540091 CDPF1Q6NVV7 123 aa6.5□□□□□ -1.37
SPPL3-205ENST00000540091 ZNF34Q8IZ26 560 aa6.5□□□□□ -1.37
SPPL3-205ENST00000540091 RPGRQ92834 1020 aaKnown RBP6.5□□□□□ -1.37
SPPL3-205ENST00000540091 WDR89Q96FK6 387 aaPredicted RBP6.5□□□□□ -1.37
SPPL3-205ENST00000540091 FANCD2OSQ96PS1 177 aa6.5□□□□□ -1.37
SPPL3-205ENST00000540091 PSMD1Q99460 953 aa6.5□□□□□ -1.37
SPPL3-205ENST00000540091 ACSS3Q9H6R3 686 aa6.5□□□□□ -1.37
SPPL3-205ENST00000540091 PICK1Q9NRD5 415 aa6.5□□□□□ -1.37
SPPL3-205ENST00000540091 FAM105AQ9NUU6 356 aa6.5□□□□□ -1.37
SPPL3-205ENST00000540091 SNED1Q8TER0 1413 aa6.5□□□□□ -1.37
SPPL3-205ENST00000540091 ABCC12Q96J65 1359 aa6.49□□□□□ -1.37
SPPL3-205ENST00000540091 CHL1O00533 1208 aa6.49□□□□□ -1.37
SPPL3-205ENST00000540091 NTSR2O95665 410 aa6.49□□□□□ -1.37
SPPL3-205ENST00000540091 CTSHP09668 335 aa6.49□□□□□ -1.37
SPPL3-205ENST00000540091 DDX10Q13206 875 aaKnown RBP6.49□□□□□ -1.37
SPPL3-205ENST00000540091 AGMOQ6ZNB7 445 aa6.49□□□□□ -1.37
SPPL3-205ENST00000540091 TTLL7Q6ZT98 887 aa6.49□□□□□ -1.37
SPPL3-205ENST00000540091 LRP10Q7Z4F1 713 aa6.49□□□□□ -1.37
SPPL3-205ENST00000540091 DNAJC5GQ8N7S2 189 aa6.49□□□□□ -1.37
SPPL3-205ENST00000540091 GRIN3AQ8TCU5 1115 aa6.49□□□□□ -1.37
SPPL3-205ENST00000540091 ELMO3Q96BJ8 720 aa6.49□□□□□ -1.37
SPPL3-205ENST00000540091 RBM17Q96I25 401 aaKnown RBP6.49□□□□□ -1.37
SPPL3-205ENST00000540091 CRAMP1Q96RY5 1269 aa6.49□□□□□ -1.37
SPPL3-205ENST00000540091 THUMPD2Q9BTF0 503 aaKnown RBP6.49□□□□□ -1.37
SPPL3-205ENST00000540091 TMX4Q9H1E5 349 aaPredicted RBP6.49□□□□□ -1.37
SPPL3-205ENST00000540091 MIR1-1HGQ9H1L0 117 aa6.49□□□□□ -1.37
SPPL3-205ENST00000540091 VPS33BQ9H267 617 aa6.49□□□□□ -1.37
SPPL3-205ENST00000540091 PRKRIP1Q9H875 184 aaPredicted RBP6.49□□□□□ -1.37
SPPL3-205ENST00000540091 DDX21Q9NR30 783 aaKnown RBP eCLIP6.49□□□□□ -1.37
SPPL3-205ENST00000540091 PCDHA4Q9UN74 947 aa6.49□□□□□ -1.37
SPPL3-205ENST00000540091 RRP7AQ9Y3A4 280 aaKnown RBP6.49□□□□□ -1.37
SPPL3-205ENST00000540091 PCDHGC5Q9Y5F6 944 aa6.49□□□□□ -1.37
SPPL3-205ENST00000540091 UBN2Q6ZU65 1347 aa6.49□□□□□ -1.37
SPPL3-205ENST00000540091 RNGTTO60942 597 aaKnown RBP6.48□□□□□ -1.37
SPPL3-205ENST00000540091 NFICP08651 508 aa6.48□□□□□ -1.37
SPPL3-205ENST00000540091 MYL6BP14649 208 aa6.48□□□□□ -1.37
SPPL3-205ENST00000540091 GRIK1P39086 918 aa6.48□□□□□ -1.37
SPPL3-205ENST00000540091 IARSP41252 1262 aaKnown RBP6.48□□□□□ -1.37
SPPL3-205ENST00000540091 CYP27A1Q02318 531 aa6.48□□□□□ -1.37
SPPL3-205ENST00000540091 MRPL58Q14197 206 aaKnown RBP6.48□□□□□ -1.37
SPPL3-205ENST00000540091 SLC10A5Q5PT55 438 aa6.48□□□□□ -1.37
SPPL3-205ENST00000540091 ZMYM1Q5SVZ6 1142 aa6.48□□□□□ -1.37
SPPL3-205ENST00000540091 HDXQ7Z353 690 aa6.48□□□□□ -1.37
SPPL3-205ENST00000540091 LDHDQ86WU2 507 aa6.48□□□□□ -1.37
SPPL3-205ENST00000540091 RELL1Q8IUW5 271 aa6.48□□□□□ -1.37
SPPL3-205ENST00000540091 SMYD4Q8IYR2 804 aaPredicted RBP6.48□□□□□ -1.37
SPPL3-205ENST00000540091 JMYQ8N9B5 988 aa6.48□□□□□ -1.37
SPPL3-205ENST00000540091 KCT2Q8NC54 265 aa6.48□□□□□ -1.37
SPPL3-205ENST00000540091 RNF214Q8ND24 703 aa6.48□□□□□ -1.37
SPPL3-205ENST00000540091 JDP2Q8WYK2 163 aa6.48□□□□□ -1.37
SPPL3-205ENST00000540091 METTL22Q9BUU2 404 aaPredicted RBP6.48□□□□□ -1.37
SPPL3-205ENST00000540091 UTP14AQ9BVJ6 771 aaKnown RBP6.48□□□□□ -1.37
SPPL3-205ENST00000540091 SEMA6CQ9H3T2 930 aa6.48□□□□□ -1.37
SPPL3-205ENST00000540091 SSU72Q9NP77 194 aaKnown RBP6.48□□□□□ -1.37
SPPL3-205ENST00000540091 PCOLCE2Q9UKZ9 415 aa6.48□□□□□ -1.37
SPPL3-205ENST00000540091 RNF112Q9ULX5 631 aa6.48□□□□□ -1.37
SPPL3-205ENST00000540091 DAGLAQ9Y4D2 1042 aa6.48□□□□□ -1.37
SPPL3-205ENST00000540091 SNCAIPQ9Y6H5 919 aa6.48□□□□□ -1.37
SPPL3-205ENST00000540091 FZD9O00144 591 aa6.47□□□□□ -1.37
SPPL3-205ENST00000540091 FANCGO15287 622 aa6.47□□□□□ -1.37
SPPL3-205ENST00000540091 HSP90B1P14625 803 aaKnown RBP6.47□□□□□ -1.37
SPPL3-205ENST00000540091 EIF2S2P20042 333 aaKnown RBP6.47□□□□□ -1.37
SPPL3-205ENST00000540091 ZEB1P37275 1124 aaPredicted RBP6.47□□□□□ -1.37
SPPL3-205ENST00000540091 TCIRG1Q13488 830 aa6.47□□□□□ -1.37
SPPL3-205ENST00000540091 SUSD4Q5VX71 490 aa6.47□□□□□ -1.37
SPPL3-205ENST00000540091 CCDC84Q86UT8 332 aaPredicted RBP6.47□□□□□ -1.37
SPPL3-205ENST00000540091 PNMA8AQ86V59 439 aaPredicted RBP6.47□□□□□ -1.37
SPPL3-205ENST00000540091 GPC2Q8N158 579 aa6.47□□□□□ -1.37
SPPL3-205ENST00000540091 NGEFQ8N5V2 710 aa6.47□□□□□ -1.37
SPPL3-205ENST00000540091 SUPT20HQ8NEM7 779 aa6.47□□□□□ -1.37
SPPL3-205ENST00000540091 DISC1Q9NRI5 854 aa6.47□□□□□ -1.37
SPPL3-205ENST00000540091 IFT57Q9NWB7 429 aa6.47□□□□□ -1.37
SPPL3-205ENST00000540091 HYPKQ9NX55 129 aa6.47□□□□□ -1.37
SPPL3-205ENST00000540091 DBF4Q9UBU7 674 aaPredicted RBP6.47□□□□□ -1.37
SPPL3-205ENST00000540091 SH3TC1Q8TE82 1336 aa6.47□□□□□ -1.37
SPPL3-205ENST00000540091 BBOX1O75936 387 aa6.46□□□□□ -1.38
SPPL3-205ENST00000540091 GPTP24298 496 aa6.46□□□□□ -1.38
SPPL3-205ENST00000540091 EIF6P56537 245 aaKnown RBP6.46□□□□□ -1.38
SPPL3-205ENST00000540091 GNAI1P63096 354 aa6.46□□□□□ -1.38
SPPL3-205ENST00000540091 TTLL4Q14679 1199 aa6.46□□□□□ -1.38
SPPL3-205ENST00000540091 MAP3K11Q16584 847 aa6.46□□□□□ -1.38
SPPL3-205ENST00000540091 COPS6Q7L5N1 327 aa6.46□□□□□ -1.38
SPPL3-205ENST00000540091 NLRP10Q86W26 655 aa6.46□□□□□ -1.38
SPPL3-205ENST00000540091 SYNE4Q8N205 404 aa6.46□□□□□ -1.38
SPPL3-205ENST00000540091 PLBD2Q8NHP8 589 aa6.46□□□□□ -1.38
SPPL3-205ENST00000540091 XAGE3Q8WTP9 111 aa6.46□□□□□ -1.38
SPPL3-205ENST00000540091 TBC1D32Q96NH3 1257 aa6.46□□□□□ -1.38
SPPL3-205ENST00000540091 RSRP1Q9BUV0 290 aa6.46□□□□□ -1.38
SPPL3-205ENST00000540091 RTFDC1Q9BY42 306 aaPredicted RBP6.46□□□□□ -1.38
SPPL3-205ENST00000540091 TAF1DQ9H5J8 278 aaPredicted RBP6.46□□□□□ -1.38
SPPL3-205ENST00000540091 ZNF277Q9NRM2 450 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms