RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 LRRC37A2A6NM11 1700 aa21.23■□□□□ 0.99
SNRPA1-203ENST00000540017 PDE4DIPQ5VU43 2346 aa21.22■□□□□ 0.99
SNRPA1-203ENST00000540017 KLF18A0A0U1RQI7 1052 aa21.22■□□□□ 0.99
SNRPA1-203ENST00000540017 COL6A1P12109 1028 aa21.22■□□□□ 0.99
SNRPA1-203ENST00000540017 AKR1A1P14550 325 aa21.22■□□□□ 0.99
SNRPA1-203ENST00000540017 SMARCA1P28370 1054 aa21.22■□□□□ 0.99
SNRPA1-203ENST00000540017 CCDC144BQ3MJ40 725 aa21.22■□□□□ 0.99
SNRPA1-203ENST00000540017 SYTL5Q8TDW5 730 aaPredicted RBP21.22■□□□□ 0.99
SNRPA1-203ENST00000540017 FAM184BQ9ULE4 1060 aa21.22■□□□□ 0.99
SNRPA1-203ENST00000540017 SEC24BO95487 1268 aa21.21■□□□□ 0.99
SNRPA1-203ENST00000540017 PGK1P00558 417 aa21.21■□□□□ 0.99
SNRPA1-203ENST00000540017 RARBP10826 455 aa21.21■□□□□ 0.99
SNRPA1-203ENST00000540017 PSMA5P28066 241 aa21.21■□□□□ 0.99
SNRPA1-203ENST00000540017 GNAQP50148 359 aa21.21■□□□□ 0.99
SNRPA1-203ENST00000540017 APOBRQ0VD83 1088 aa21.21■□□□□ 0.99
SNRPA1-203ENST00000540017 TMTC3Q6ZXV5 915 aa21.21■□□□□ 0.99
SNRPA1-203ENST00000540017 EEPD1Q7L9B9 569 aa21.21■□□□□ 0.99
SNRPA1-203ENST00000540017 CCDC82Q8N4S0 544 aa21.21■□□□□ 0.99
SNRPA1-203ENST00000540017 BRF1Q92994 677 aa21.21■□□□□ 0.99
SNRPA1-203ENST00000540017 TAAR1Q96RJ0 339 aa21.21■□□□□ 0.99
SNRPA1-203ENST00000540017 LZTS2Q9BRK4 669 aa21.21■□□□□ 0.99
SNRPA1-203ENST00000540017 C11orf49Q9H6J7 331 aa21.21■□□□□ 0.99
SNRPA1-203ENST00000540017 ZSWIM6Q9HCJ5 1215 aa21.21■□□□□ 0.99
SNRPA1-203ENST00000540017 PDGFCQ9NRA1 345 aa21.21■□□□□ 0.99
SNRPA1-203ENST00000540017 FAM217BQ9NTX9 383 aaPredicted RBP21.21■□□□□ 0.99
SNRPA1-203ENST00000540017 ADD3Q9UEY8 706 aaKnown RBP21.21■□□□□ 0.99
SNRPA1-203ENST00000540017 DNAH12Q6ZR08 3092 aa21.21■□□□□ 0.99
SNRPA1-203ENST00000540017 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.2■□□□□ 0.98
SNRPA1-203ENST00000540017 hCG_1642624A0A1W2PR95 340 aa21.2■□□□□ 0.98
SNRPA1-203ENST00000540017 ZBTB43O43298 467 aa21.2■□□□□ 0.98
SNRPA1-203ENST00000540017 CFBP00751 764 aa21.2■□□□□ 0.98
SNRPA1-203ENST00000540017 PTGS1P23219 599 aa21.2■□□□□ 0.98
SNRPA1-203ENST00000540017 IRX5P78411 483 aaPredicted RBP21.2■□□□□ 0.98
SNRPA1-203ENST00000540017 LRRC41Q15345 812 aa21.2■□□□□ 0.98
SNRPA1-203ENST00000540017 TMEM63BQ5T3F8 832 aa21.2■□□□□ 0.98
SNRPA1-203ENST00000540017 TAPT1Q6NXT6 567 aa21.2■□□□□ 0.98
SNRPA1-203ENST00000540017 SYNE3Q6ZMZ3 975 aa21.2■□□□□ 0.98
SNRPA1-203ENST00000540017 MCF2L2Q86YR7 1114 aa21.2■□□□□ 0.98
SNRPA1-203ENST00000540017 FBXO16Q8IX29 292 aaPredicted RBP21.2■□□□□ 0.98
SNRPA1-203ENST00000540017 RRP36Q96EU6 259 aaKnown RBP21.2■□□□□ 0.98
SNRPA1-203ENST00000540017 AGXT2Q9BYV1 514 aa21.2■□□□□ 0.98
SNRPA1-203ENST00000540017 XPNPEP3Q9NQH7 507 aa21.2■□□□□ 0.98
SNRPA1-203ENST00000540017 DNM1LO00429 736 aa21.19■□□□□ 0.98
SNRPA1-203ENST00000540017 MYCNP04198 464 aaPredicted RBP21.19■□□□□ 0.98
SNRPA1-203ENST00000540017 EDNRBP24530 442 aa21.19■□□□□ 0.98
SNRPA1-203ENST00000540017 CDC27P30260 824 aa21.19■□□□□ 0.98
SNRPA1-203ENST00000540017 ADCYAP1R1P41586 468 aa21.19■□□□□ 0.98
SNRPA1-203ENST00000540017 HSD17B4P51659 736 aa21.19■□□□□ 0.98
SNRPA1-203ENST00000540017 FGD1P98174 961 aa21.19■□□□□ 0.98
SNRPA1-203ENST00000540017 GHRHRQ02643 423 aa21.19■□□□□ 0.98
SNRPA1-203ENST00000540017 FUT2Q10981 343 aa21.19■□□□□ 0.98
SNRPA1-203ENST00000540017 RUFY3Q7L099 469 aa21.19■□□□□ 0.98
SNRPA1-203ENST00000540017 FBXL16Q8N461 479 aa21.19■□□□□ 0.98
SNRPA1-203ENST00000540017 ARRDC4Q8NCT1 418 aa21.19■□□□□ 0.98
SNRPA1-203ENST00000540017 DNERQ8NFT8 737 aa21.19■□□□□ 0.98
SNRPA1-203ENST00000540017 HTATIP2Q9BUP3 242 aa21.19■□□□□ 0.98
SNRPA1-203ENST00000540017 MAF1Q9H063 256 aa21.19■□□□□ 0.98
SNRPA1-203ENST00000540017 ALPK3Q96L96 1907 aa21.19■□□□□ 0.98
SNRPA1-203ENST00000540017 GOLGA8AA7E2F4 631 aa21.18■□□□□ 0.98
SNRPA1-203ENST00000540017 GOLGA8BA8MQT2 603 aa21.18■□□□□ 0.98
SNRPA1-203ENST00000540017 ADAMTS4O75173 837 aa21.18■□□□□ 0.98
SNRPA1-203ENST00000540017 HOXA13P31271 388 aaPredicted RBP21.18■□□□□ 0.98
SNRPA1-203ENST00000540017 RTN1Q16799 776 aa21.18■□□□□ 0.98
SNRPA1-203ENST00000540017 DPF3Q92784 378 aa21.18■□□□□ 0.98
SNRPA1-203ENST00000540017 UPF3BQ9BZI7 483 aaKnown RBP21.18■□□□□ 0.98
SNRPA1-203ENST00000540017 SYNRGQ9UMZ2 1314 aa21.18■□□□□ 0.98
SNRPA1-203ENST00000540017 LOC102724159A0A0B4J2E5 919 aa21.17■□□□□ 0.98
SNRPA1-203ENST00000540017 MYADML2A6NDP7 307 aa21.17■□□□□ 0.98
SNRPA1-203ENST00000540017 DUSP11O75319 330 aaKnown RBP21.17■□□□□ 0.98
SNRPA1-203ENST00000540017 TOB2Q14106 344 aaPredicted RBP21.17■□□□□ 0.98
SNRPA1-203ENST00000540017 PWP2Q15269 919 aaKnown RBP21.17■□□□□ 0.98
SNRPA1-203ENST00000540017 TM6SF1Q9BZW5 370 aa21.17■□□□□ 0.98
SNRPA1-203ENST00000540017 SENP6Q9GZR1 1112 aaPredicted RBP21.17■□□□□ 0.98
SNRPA1-203ENST00000540017 VTA1Q9NP79 307 aa21.17■□□□□ 0.98
SNRPA1-203ENST00000540017 NAP1L2Q9ULW6 460 aaPredicted RBP21.17■□□□□ 0.98
SNRPA1-203ENST00000540017 CNTNAP5Q8WYK1 1306 aa21.17■□□□□ 0.98
SNRPA1-203ENST00000540017 SMPD1P17405 629 aa21.16■□□□□ 0.98
SNRPA1-203ENST00000540017 TNFAIP2Q03169 654 aa21.16■□□□□ 0.98
SNRPA1-203ENST00000540017 PDE4DQ08499 809 aa21.16■□□□□ 0.98
SNRPA1-203ENST00000540017 RMDN3Q96TC7 470 aa21.16■□□□□ 0.98
SNRPA1-203ENST00000540017 RBM28Q9NW13 759 aaKnown RBP21.16■□□□□ 0.98
SNRPA1-203ENST00000540017 SEC63Q9UGP8 760 aaKnown RBP21.16■□□□□ 0.98
SNRPA1-203ENST00000540017 GNEQ9Y223 722 aaKnown RBP21.16■□□□□ 0.98
SNRPA1-203ENST00000540017 CYP46A1Q9Y6A2 500 aa21.16■□□□□ 0.98
SNRPA1-203ENST00000540017 KBTBD13C9JR72 458 aa21.15■□□□□ 0.98
SNRPA1-203ENST00000540017 CTAGE5O15320 804 aa21.15■□□□□ 0.98
SNRPA1-203ENST00000540017 ADD1P35611 737 aaKnown RBP21.15■□□□□ 0.98
SNRPA1-203ENST00000540017 RCAN1P53805 252 aa21.15■□□□□ 0.98
SNRPA1-203ENST00000540017 TRAF1Q13077 416 aa21.15■□□□□ 0.98
SNRPA1-203ENST00000540017 LRRC26Q2I0M4 334 aa21.15■□□□□ 0.98
SNRPA1-203ENST00000540017 KLHDC9Q8NEP7 349 aa21.15■□□□□ 0.98
SNRPA1-203ENST00000540017 NSUN6Q8TEA1 469 aaKnown RBP21.15■□□□□ 0.98
SNRPA1-203ENST00000540017 UPF3AQ9H1J1 476 aaKnown RBP21.15■□□□□ 0.98
SNRPA1-203ENST00000540017 EIF2AK2P19525 551 aaKnown RBP21.14■□□□□ 0.97
SNRPA1-203ENST00000540017 METAP2P50579 478 aaKnown RBP eCLIP21.14■□□□□ 0.97
SNRPA1-203ENST00000540017 EVCP57679 992 aa21.14■□□□□ 0.97
SNRPA1-203ENST00000540017 C8orf34Q49A92 452 aa21.14■□□□□ 0.97
SNRPA1-203ENST00000540017 IQSEC1Q6DN90 963 aa21.14■□□□□ 0.97
SNRPA1-203ENST00000540017 CCSAPQ6IQ19 270 aaPredicted RBP21.14■□□□□ 0.97
SNRPA1-203ENST00000540017 RNF180Q86T96 592 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms