RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 ZNF569Q5MCW4 686 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 SPDYAQ5MJ70 313 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 OLFML1Q6UWY5 402 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 PI16Q6UXB8 463 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 CEP128Q6ZU80 1094 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 CROCCP2Q86T23 111 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 NUTM2AQ8IVF1 878 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-211ENST00000539921 ANKK1Q8NFD2 765 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 USP33Q8TEY7 942 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 NACC2Q96BF6 587 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 RNPC3Q96LT9 517 aaKnown RBP6.76□□□□□ -1.33
SNHG1-211ENST00000539921 RAB3IPQ96QF0 476 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-211ENST00000539921 CTAGE1Q96RT6 745 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 SDF4Q9BRK5 362 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 TMEM165Q9HC07 324 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 TIMMDC1Q9NPL8 285 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 GPHNQ9NQX3 736 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-211ENST00000539921 HERC5Q9UII4 1024 aaKnown RBP6.76□□□□□ -1.33
SNHG1-211ENST00000539921 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.76□□□□□ -1.33
SNHG1-211ENST00000539921 SSX2IPQ9Y2D8 614 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 LEMD3Q9Y2U8 911 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 L3MBTL1Q9Y468 752 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 SAR1BQ9Y6B6 198 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 TDRD9Q8NDG6 1382 aaKnown RBP6.76□□□□□ -1.33
SNHG1-211ENST00000539921 PLEKHG1Q9ULL1 1385 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 KIAA0556O60303 1618 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 SYCP2Q9BX26 1530 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 MYPNQ86TC9 1320 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 NEO1Q92859 1461 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 MLH3Q9UHC1 1453 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 MAGEA13PA6NCF6 341 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 TMEM247A6NEH6 219 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 ATMINO43313 823 aaPredicted RBP6.75□□□□□ -1.33
SNHG1-211ENST00000539921 ORC4O43929 436 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 MGEA5O60502 916 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 PFDN1O60925 122 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 CLASP2O75122 1294 aaKnown RBP6.75□□□□□ -1.33
SNHG1-211ENST00000539921 RAB11FIP3O75154 756 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 ALDH1L1O75891 902 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 ATP5HO75947 161 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 IFIT2P09913 472 aaKnown RBP6.75□□□□□ -1.33
SNHG1-211ENST00000539921 U2AF1L5P0DN76 240 aaPredicted RBP6.75□□□□□ -1.33
SNHG1-211ENST00000539921 XBP1P17861 261 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 GNAZP19086 355 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 HOXD12P35452 270 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 LIFRP42702 1097 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 MTHFSP49914 203 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 CDK17Q00537 523 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 U2AF1Q01081 240 aaKnown RBP eCLIP6.75□□□□□ -1.336e-8■■■□□ 17.5
SNHG1-211ENST00000539921 OCRLQ01968 901 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 EIF2B5Q13144 721 aaKnown RBP6.75□□□□□ -1.33
SNHG1-211ENST00000539921 DSG2Q14126 1118 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 SPCS2Q15005 226 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 TRIM71Q2Q1W2 868 aaKnown RBP6.75□□□□□ -1.33
SNHG1-211ENST00000539921 PDCD4Q53EL6 469 aaKnown RBP6.75□□□□□ -1.33
SNHG1-211ENST00000539921 SLC44A4Q53GD3 710 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 NUTM2GQ5VZR2 741 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 OLFM4Q6UX06 510 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 CCDC129Q6ZRS4 1044 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 EXOC3L1Q86VI1 746 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 SLC15A3Q8IY34 581 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 FAM186BQ8IYM0 893 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 CNTROBQ8N137 903 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 SLC35F6Q8N357 371 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 SCAIQ8N9R8 606 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 FSIP1Q8NA03 581 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.75□□□□□ -1.332e-85■□□□□ 9.7
SNHG1-211ENST00000539921 LINS1Q8NG48 757 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 CAGE1Q8TC20 777 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 ENOX1Q8TC92 643 aaKnown RBP6.75□□□□□ -1.33
SNHG1-211ENST00000539921 OTUD7AQ8TE49 926 aaPredicted RBP6.75□□□□□ -1.33
SNHG1-211ENST00000539921 SREK1Q8WXA9 508 aaKnown RBP6.75□□□□□ -1.33
SNHG1-211ENST00000539921 ATRIPQ8WXE1 791 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 FAM136AQ96C01 138 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 HIC2Q96JB3 615 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 TUBGCP5Q96RT8 1024 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 SETDB2Q96T68 719 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 NSRP1Q9H0G5 558 aaKnown RBP6.75□□□□□ -1.33
SNHG1-211ENST00000539921 IRF2BPLQ9H1B7 796 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 EHD4Q9H223 541 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 PLCB1Q9NQ66 1216 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 ARHGEF3Q9NR81 526 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 SAMSN1Q9NSI8 373 aaKnown RBP6.75□□□□□ -1.33
SNHG1-211ENST00000539921 CCDC87Q9NVE4 849 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 POLR3EQ9NVU0 708 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 SUCLA2Q9P2R7 463 aaPredicted RBP6.75□□□□□ -1.33
SNHG1-211ENST00000539921 HESX1Q9UBX0 185 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 MAPK8IP1Q9UQF2 711 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 TBC1D30Q9Y2I9 924 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 FADS3Q9Y5Q0 445 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 EMILIN1Q9Y6C2 1016 aa6.75□□□□□ -1.33
SNHG1-211ENST00000539921 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.75□□□□□ -1.33
SNHG1-211ENST00000539921 IFT172Q9UG01 1749 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 A0A1B0GTH6 734 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 SMIM31A0A1B0GVY4 71 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 HTR3EA5X5Y0 456 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 RAD21O60216 631 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 MFAP3LO75121 409 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 RAPGEF3O95398 923 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 LARGE1O95461 756 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms