RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 GBP3Q9H0R5 595 aa8.68□□□□□ -1.02
CCDC60-204ENST00000539847 RASSF4Q9H2L5 321 aa8.68□□□□□ -1.02
CCDC60-204ENST00000539847 BOLA2Q9H3K6 86 aa8.68□□□□□ -1.02
CCDC60-204ENST00000539847 RAB21Q9UL25 225 aa8.68□□□□□ -1.02
CCDC60-204ENST00000539847 IQSEC3Q9UPP2 1182 aaPredicted RBP8.68□□□□□ -1.02
CCDC60-204ENST00000539847 USP17L15C9J2P7 530 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 USP17L10C9JJH3 530 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 USP17L13C9JLJ4 530 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 USP17L12C9JPN9 530 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 USP17L11C9JVI0 530 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 USP17L21D6R901 530 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 USP17L18D6R9N7 530 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 USP17L22D6RA61 530 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 USP17L17D6RBQ6 530 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 USP17L19D6RCP7 530 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 USP17L20D6RJB6 530 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 ACTN2P35609 894 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 UBASH3AP57075 661 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 HDLBPQ00341 1268 aaKnown RBP8.67□□□□□ -1.02
CCDC60-204ENST00000539847 USP17L24Q0WX57 530 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 STK3Q13188 491 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 RASA3Q14644 834 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 STK38Q15208 465 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 ZSCAN26Q16670 478 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 AXDND1Q5T1B0 1012 aaPredicted RBP8.67□□□□□ -1.02
CCDC60-204ENST00000539847 NBPF12Q5TAG4 269 aaPredicted RBP8.67□□□□□ -1.02
CCDC60-204ENST00000539847 SYNE3Q6ZMZ3 975 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 GOLGA6L1Q8N7Z2 621 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 CEP112Q8N8E3 955 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 CD99L2Q8TCZ2 262 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 GOLGA1Q92805 767 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 HOOK2Q96ED9 719 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 PRMT6Q96LA8 375 aaPredicted RBP8.67□□□□□ -1.02
CCDC60-204ENST00000539847 SPSB2Q99619 263 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 PTPN18Q99952 460 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 MRIQ9BWK5 157 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 CCDC8Q9H0W5 538 aaPredicted RBP8.67□□□□□ -1.02
CCDC60-204ENST00000539847 ZFYVE28Q9HCC9 887 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 PRDM9Q9NQV7 894 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.67□□□□□ -1.02
CCDC60-204ENST00000539847 HOOK1Q9UJC3 728 aaKnown RBP8.67□□□□□ -1.02
CCDC60-204ENST00000539847 PA2G4Q9UQ80 394 aaKnown RBP8.67□□□□□ -1.02
CCDC60-204ENST00000539847 HPSEQ9Y251 543 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 MRFAP1Q9Y605 127 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 CENPFP49454 3210 aa8.67□□□□□ -1.02
CCDC60-204ENST00000539847 NEDD4P46934 1319 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 SOWAHDA6NJG2 315 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 ERLIN1O75477 346 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 EIF3JO75822 258 aaKnown RBP8.66□□□□□ -1.02
CCDC60-204ENST00000539847 DXOO77932 396 aaKnown RBP8.66□□□□□ -1.02
CCDC60-204ENST00000539847 URI1O94763 535 aaPredicted RBP8.66□□□□□ -1.02
CCDC60-204ENST00000539847 TOP1P11387 765 aaKnown RBP8.66□□□□□ -1.02
CCDC60-204ENST00000539847 RFX5P48382 616 aaPredicted RBP8.66□□□□□ -1.02
CCDC60-204ENST00000539847 TNNI2P48788 182 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 FXR1P51114 621 aaKnown RBP eCLIP8.66□□□□□ -1.02
CCDC60-204ENST00000539847 NDUFA8P51970 172 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 RAD51AP2Q09MP3 1159 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 UBE4AQ14139 1066 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 DPCR1Q3MIW9 517 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 SLC9C1Q4G0N8 1177 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 CRTC2Q53ET0 693 aaPredicted RBP8.66□□□□□ -1.02
CCDC60-204ENST00000539847 TNNI3KQ59H18 835 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 ZMYM1Q5SVZ6 1142 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 FKBP1CQ5VVH2 108 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 ANO1Q5XXA6 986 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 HDXQ7Z353 690 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 TRIML1Q8N9V2 468 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 MSANTD4Q8NCY6 345 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 OPTNQ96CV9 577 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 MRRFQ96E11 262 aaKnown RBP8.66□□□□□ -1.02
CCDC60-204ENST00000539847 TEPSINQ96N21 525 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 PANX2Q96RD6 677 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 CARD6Q9BX69 1037 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 BICC1Q9H694 974 aaKnown RBP8.66□□□□□ -1.02
CCDC60-204ENST00000539847 VEZTQ9HBM0 779 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 BRMS1Q9HCU9 246 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 EVA1BQ9NVM1 165 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 KIAA1522Q9P206 1035 aaPredicted RBP8.66□□□□□ -1.02
CCDC60-204ENST00000539847 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.66□□□□□ -1.02
CCDC60-204ENST00000539847 DACH1Q9UI36 760 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 PPP2R2CQ9Y2T4 447 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 FPGT-TNNI3KV9GXZ4 949 aa8.66□□□□□ -1.02
CCDC60-204ENST00000539847 BRCA2P51587 3418 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 CLRN2A0PK11 232 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 VWA3AA6NCI4 1184 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 CUTAO60888 179 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 CCNYL3P0C7X3 344 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 CETPP11597 493 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 FDPSP14324 419 aaKnown RBP8.65□□□□□ -1.02
CCDC60-204ENST00000539847 OAS2P29728 719 aaKnown RBP8.65□□□□□ -1.02
CCDC60-204ENST00000539847 FOXO4P98177 505 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 PPP2R3AQ06190 1150 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 TAF1CQ15572 869 aaPredicted RBP8.65□□□□□ -1.02
CCDC60-204ENST00000539847 CCDC57Q2TAC2 916 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 MSS51Q4VC12 460 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 MFSD14BQ5SR56 506 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 GORABQ5T7V8 394 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 KANK3Q6NY19 840 aa8.65□□□□□ -1.02
CCDC60-204ENST00000539847 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.65□□□□□ -1.02
CCDC60-204ENST00000539847 SRGAP1Q7Z6B7 1085 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms