RNA–Protein interactions for RNA: ENST00000539517.6

NOVA1-206, Transcript of NOVA alternative splicing regulator 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NOVA1, Length 3,912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-206ENST00000539517 DESI2Q9BSY9 194 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 DHX36Q9H2U1 1008 aaKnown RBP6.89□□□□□ -1.31
NOVA1-206ENST00000539517 BMP2KQ9NSY1 1161 aaPredicted RBP6.89□□□□□ -1.31
NOVA1-206ENST00000539517 TAB2Q9NYJ8 693 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 SUGT1Q9Y2Z0 365 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 NID2Q14112 1375 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 A0A1B0GUL6 1792 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 ADAMTSL1Q8N6G6 1762 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 NPHP3-ACAD11A0A0J9YXS1 232 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 SARSP49591 514 aaKnown RBP6.89□□□□□ -1.31
NOVA1-206ENST00000539517 STK4Q13043 487 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 E2F4Q16254 413 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 ECM1Q16610 540 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 CCDC12Q8WUD4 166 aaPredicted RBP6.89□□□□□ -1.31
NOVA1-206ENST00000539517 CDK5RAP3Q96JB5 506 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 PURBQ96QR8 312 aaKnown RBP6.89□□□□□ -1.31
NOVA1-206ENST00000539517 TAOK3Q9H2K8 898 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 SWAP70Q9UH65 585 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 HDAC9Q9UKV0 1011 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 ZNRF3Q9ULT6 936 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 CCDC88AQ3V6T2 1871 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 ANKRD31Q8N7Z5 1873 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 MYH6P13533 1939 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 DDX39AO00148 427 aaKnown RBP6.89□□□□□ -1.31
NOVA1-206ENST00000539517 ZBTB39O15060 712 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 CAVIN2O95810 425 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 RPN1P04843 607 aaKnown RBP6.89□□□□□ -1.31
NOVA1-206ENST00000539517 TNNT1P13805 278 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 KMT5BQ4FZB7 885 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 PDXDC2PQ6P474 469 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.89□□□□□ -1.31
NOVA1-206ENST00000539517 KRT25Q7Z3Z0 450 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 CERS3Q8IU89 383 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 RTKN2Q8IZC4 609 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 SNX29Q8TEQ0 813 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 ZKSCAN4Q969J2 545 aaPredicted RBP6.89□□□□□ -1.31
NOVA1-206ENST00000539517 MRFAP1L1Q96HT8 127 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 IDI2Q9BXS1 227 aa6.89□□□□□ -1.31
NOVA1-206ENST00000539517 DDX25Q9UHL0 483 aaKnown RBP6.89□□□□□ -1.31
NOVA1-206ENST00000539517 IGKV6D-41A0A0C4DH26 115 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 SFI1A8K8P3 1242 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 BMP3P12645 472 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 POLD1P28340 1107 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 INPP5BP32019 993 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 PDE4DQ08499 809 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 MTF1Q14872 753 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 NELFBQ8WX92 580 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 CUL5Q93034 780 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 CCDC17Q96LX7 622 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 PCDHA12Q9UN75 941 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 A0A0U1RQJ8 604 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 PPP1R3GB7ZBB8 358 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 E9PMD0 336 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 NFKBIEO00221 500 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 N4BP3O15049 544 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 ZNF76P36508 570 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 MRPL12P52815 198 aaKnown RBP6.88□□□□□ -1.31
NOVA1-206ENST00000539517 GPATCH4Q5T3I0 446 aaKnown RBP6.88□□□□□ -1.31
NOVA1-206ENST00000539517 CIAPIN1Q6FI81 312 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 TMEM179Q6ZVK1 233 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 MAEAQ7L5Y9 396 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 MICALL2Q8IY33 904 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 MLKLQ8NB16 471 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 ATRIPQ8WXE1 791 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 LZTS2Q9BRK4 669 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 MMTAG2Q9BU76 263 aaKnown RBP6.88□□□□□ -1.31
NOVA1-206ENST00000539517 ZNF341Q9BYN7 854 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 SH3GLB2Q9NR46 395 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 FAM237AA0A1B0GTK4 181 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 MYO1BO43795 1136 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 VIL1P09327 827 aaKnown RBP6.88□□□□□ -1.31
NOVA1-206ENST00000539517 TRAPPC10P48553 1259 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 PRELPP51888 382 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 NBPF12Q5TAG4 269 aaPredicted RBP6.88□□□□□ -1.31
NOVA1-206ENST00000539517 ARHGAP27Q6ZUM4 889 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 CCDC34Q96HJ3 373 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 AGBL1Q96MI9 1066 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 SRRTQ9BXP5 876 aaKnown RBP6.88□□□□□ -1.31
NOVA1-206ENST00000539517 ZBTB21Q9ULJ3 1066 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 PRR12Q9ULL5 1215 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 KIAA1024Q9UPX6 916 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 SYNRGQ9UMZ2 1314 aa6.88□□□□□ -1.31
NOVA1-206ENST00000539517 ZNF646O15015 1829 aaPredicted RBP6.87□□□□□ -1.31
NOVA1-206ENST00000539517 BMP15O95972 392 aa6.87□□□□□ -1.31
NOVA1-206ENST00000539517 SNHG28P0DPA3 235 aa6.87□□□□□ -1.31
NOVA1-206ENST00000539517 LONP1P36776 959 aaKnown RBP6.87□□□□□ -1.31
NOVA1-206ENST00000539517 CCZ1BP86790 482 aa6.87□□□□□ -1.31
NOVA1-206ENST00000539517 CCZ1P86791 482 aaPredicted RBP6.87□□□□□ -1.31
NOVA1-206ENST00000539517 KANK3Q6NY19 840 aa6.87□□□□□ -1.31
NOVA1-206ENST00000539517 SARM1Q6SZW1 724 aa6.87□□□□□ -1.31
NOVA1-206ENST00000539517 FBXO11Q86XK2 927 aa6.87□□□□□ -1.31
NOVA1-206ENST00000539517 NELFCDQ8IXH7 590 aa6.87□□□□□ -1.31
NOVA1-206ENST00000539517 HAS1Q92839 578 aa6.87□□□□□ -1.31
NOVA1-206ENST00000539517 IRX2Q9BZI1 471 aaPredicted RBP6.87□□□□□ -1.31
NOVA1-206ENST00000539517 MYOZ2Q9NPC6 264 aa6.87□□□□□ -1.31
NOVA1-206ENST00000539517 POTEB3A0JP26 581 aa6.87□□□□□ -1.31
NOVA1-206ENST00000539517 POTECB2RU33 542 aa6.87□□□□□ -1.31
NOVA1-206ENST00000539517 GMPSP49915 693 aaPredicted RBP6.87□□□□□ -1.31
NOVA1-206ENST00000539517 PSMC6P62333 389 aa6.87□□□□□ -1.31
NOVA1-206ENST00000539517 NCAPH2Q6IBW4 605 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms