RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 TRMT112Q9UI30 125 aaKnown RBP6.38□□□□□ -1.39
RAB3GAP1-207ENST00000539493 PAIP2BQ9ULR5 123 aaKnown RBP6.38□□□□□ -1.39
RAB3GAP1-207ENST00000539493 C2CD2Q9Y426 696 aa6.38□□□□□ -1.39
RAB3GAP1-207ENST00000539493 LOC102724428A0A0B4J2F2 783 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 A0A0G2JS52 829 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 C5orf60A6NFR6 353 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 WNT7AO00755 349 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 FIBPO43427 364 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 BUB1BO60566 1050 aaPredicted RBP6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 WDHD1O75717 1129 aaPredicted RBP6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 ADORA1P30542 326 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 CRKLP46109 303 aaKnown RBP6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 NEK2P51955 445 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 SIK1P57059 783 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 ST3GAL1Q11201 340 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 MYO1EQ12965 1108 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 STIM1Q13586 685 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 ZNF268Q14587 947 aaPredicted RBP6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 E2F5Q15329 346 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 ME3Q16798 604 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 ALS2CLQ60I27 953 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 GALNT17Q6IS24 598 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 KDM7AQ6ZMT4 941 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 SAPCD2Q86UD0 394 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 ZNF34Q8IZ26 560 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 KRI1Q8N9T8 703 aaKnown RBP6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 ZNF473Q8WTR7 871 aaKnown RBP6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 NDST4Q9H3R1 872 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 PREBQ9HCU5 417 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 SH2B1Q9NRF2 756 aaPredicted RBP6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 CCDC87Q9NVE4 849 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 PPP2R2CQ9Y2T4 447 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 LRRD1A4D1F6 860 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 DPPA5A6NC42 116 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 PRPF3O43395 683 aaKnown RBP6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 TBC1D12O60347 775 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 PFKFB2O60825 505 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 BAG3O95817 575 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 FAM107AO95990 144 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 ALOX15P16050 662 aaPredicted RBP6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 RPS6KB1P23443 525 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 TCF7P36402 384 aaPredicted RBP6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 ITPK1Q13572 414 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 BYSLQ13895 437 aaKnown RBP6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 BLOC1S2Q6QNY1 142 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 C11orf57Q6ZUT1 292 aaPredicted RBP6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 EXOC3L1Q86VI1 746 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 CCDC83Q8IWF9 413 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 PEX5LQ8IYB4 626 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 CFAP61Q8NHU2 1237 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 ZSCAN31Q96LW9 406 aaPredicted RBP6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 SCAND2PQ9GZW5 306 aaPredicted RBP6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 HELLSQ9NRZ9 838 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 KIAA1522Q9P206 1035 aaPredicted RBP6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 HESX1Q9UBX0 185 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 RABL2BQ9UNT1 228 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 ZNF148Q9UQR1 794 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 KAT6BQ8WYB5 2073 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 NUP98P52948 1817 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 SPEF2Q9C093 1822 aa6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 CICQ96RK0 1608 aaPredicted RBP6.37□□□□□ -1.39
RAB3GAP1-207ENST00000539493 CCDC162PA2VCL2 907 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 BECN2A8MW95 431 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 DNM1LO00429 736 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 PDE8AO60658 829 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 CYP21A2P08686 494 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 NLRP5P59047 1200 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 HDLBPQ00341 1268 aaKnown RBP6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 DNM1Q05193 864 aaKnown RBP6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 ZMYM1Q5SVZ6 1142 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 LDHAL6AQ6ZMR3 332 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 TRPC4APQ8TEL6 797 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 TCEANC2Q96MN5 208 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 NAP1L3Q99457 506 aaPredicted RBP6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 ALDH8A1Q9H2A2 487 aaPredicted RBP6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 JADE2Q9NQC1 790 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 DACT1Q9NYF0 836 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 TFIP11Q9UBB9 837 aaKnown RBP6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 ITM2BQ9Y287 266 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 DAAM1Q9Y4D1 1078 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 LRRC42Q9Y546 428 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 SPO11Q9Y5K1 396 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 N6AMT1Q9Y5N5 214 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 RREB1Q92766 1687 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 PPIP5K2O43314 1243 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 CBFA2T2O43439 604 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 ZBED4O75132 1171 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 PHACTR2O75167 634 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 PDGFRBP09619 1106 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 GGCXP38435 758 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 CD97P48960 835 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 KRT85P78386 507 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 FKBP4Q02790 459 aaKnown RBP eCLIP6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 TOB2Q14106 344 aaPredicted RBP6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 KRT32Q14532 448 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 GNPTABQ3T906 1256 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 TTC39AQ5SRH9 613 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 C3orf62Q6ZUJ4 267 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 VGLL2Q8N8G2 317 aa6.36□□□□□ -1.39
RAB3GAP1-207ENST00000539493 CGREF1Q99674 301 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms