RNA–Protein interactions for RNA: ENST00000539469.6

PDZRN4-203, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best) BASIC

Gene PDZRN4, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-203ENST00000539469 WDR78Q5VTH9 848 aa6.96□□□□□ -1.3
PDZRN4-203ENST00000539469 DLK2Q6UY11 383 aa6.96□□□□□ -1.3
PDZRN4-203ENST00000539469 NFXL1Q6ZNB6 911 aa6.96□□□□□ -1.3
PDZRN4-203ENST00000539469 DHX36Q9H2U1 1008 aaKnown RBP6.96□□□□□ -1.3
PDZRN4-203ENST00000539469 TMOD2Q9NZR1 351 aa6.96□□□□□ -1.3
PDZRN4-203ENST00000539469 GDF11O95390 407 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 FDX1P10109 184 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 TUSC1Q2TAM9 212 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 TATDN1Q6P1N9 297 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 CCDC186Q7Z3E2 898 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 LUZP1Q86V48 1076 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 CKAP2LQ8IYA6 745 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 ZNF654Q8IZM8 581 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 SLC43A3Q8NBI5 491 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 NEDD1Q8NHV4 660 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 CHMP4CQ96CF2 233 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 CEP95Q96GE4 821 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 PI4KBQ9UBF8 816 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 PCDHGA10Q9Y5H3 936 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 RCCD1A6NED2 376 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 CCDC69A6NI79 296 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 MYO1BO43795 1136 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 TNNT1P13805 278 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 GUCY1A2P33402 732 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 ADD1P35611 737 aaKnown RBP6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 RASA3Q14644 834 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 OCLNQ16625 522 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 CCDC183Q5T5S1 534 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 IFIT1BQ5T764 474 aaKnown RBP6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 FKBP1CQ5VVH2 108 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 PRAMEF18Q5VWM3 479 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 FAM83AQ86UY5 434 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 IQCA1Q86XH1 822 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 ZNF444Q8N0Y2 327 aaPredicted RBP6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 CMTR1Q8N1G2 835 aaKnown RBP6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 CRACR2BQ8N4Y2 399 aaPredicted RBP6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 ANKRD7Q92527 254 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 MRFAP1L1Q96HT8 127 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 MTA3Q9BTC8 594 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 TCP11L1Q9NUJ3 509 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 GGA3Q9NZ52 723 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 SWAP70Q9UH65 585 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 FZD1Q9UP38 647 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 PTPDC1A2A3K4 754 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 POTECB2RU33 542 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 H7C1D1 291 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 ZBTB43O43298 467 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 PDGFRBP09619 1106 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 FDPSP14324 419 aaKnown RBP6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 NOVP48745 357 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 METAP2P50579 478 aaKnown RBP eCLIP6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 TROAPQ12815 778 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 PSMD2Q13200 908 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 SART3Q15020 963 aaKnown RBP6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 FAM173BQ6P4H8 233 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 MIGA2Q7L4E1 593 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 CCAR1Q8IX12 1150 aaKnown RBP6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 SMARCC2Q8TAQ2 1214 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 DDX11Q96FC9 970 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 SPTLC3Q9NUV7 552 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 OGFRQ9NZT2 677 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 SLC12A7Q9Y666 1083 aa6.95□□□□□ -1.3
PDZRN4-203ENST00000539469 ERICH2A1L162 156 aa6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 GOLGA8AA7E2F4 631 aa6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 GRIN3BO60391 1043 aa6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 EIF3JO75822 258 aaKnown RBP6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 SLFN14P0C7P3 912 aa6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 MMP14P50281 582 aa6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 NTRK3Q16288 839 aa6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 TPD52L1Q16890 204 aaPredicted RBP6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 TMEM47Q9BQJ4 181 aa6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 SMC3Q9UQE7 1217 aa6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 PARP14Q460N5 1801 aa6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 TNFRSF10BO14763 440 aa6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 PLEKHA8P1O95397 391 aa6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 SYCP2LQ5T4T6 812 aa6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 FERMT3Q86UX7 667 aa6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 RDH13Q8NBN7 331 aa6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 NUP133Q8WUM0 1156 aa6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 PHKBQ93100 1093 aa6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 SRPK1Q96SB4 655 aaKnown RBP6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 DEFB129Q9H1M3 183 aa6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 NEUROD4Q9HD90 331 aa6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 ADARB2Q9NS39 739 aaKnown RBP6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 TRMT1Q9NXH9 659 aaKnown RBP6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 STX8Q9UNK0 236 aa6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.94□□□□□ -1.3
PDZRN4-203ENST00000539469 VPS37CA5D8V6 355 aaPredicted RBP6.93□□□□□ -1.3
PDZRN4-203ENST00000539469 GLTPD2A6NH11 291 aa6.93□□□□□ -1.3
PDZRN4-203ENST00000539469 MPHOSPH10O00566 681 aaKnown RBP6.93□□□□□ -1.3
PDZRN4-203ENST00000539469 KIF3CO14782 793 aa6.93□□□□□ -1.3
PDZRN4-203ENST00000539469 DNM1Q05193 864 aaKnown RBP6.93□□□□□ -1.3
PDZRN4-203ENST00000539469 SLC35G1Q2M3R5 365 aa6.93□□□□□ -1.3
PDZRN4-203ENST00000539469 CERKLQ49MI3 558 aaPredicted RBP6.93□□□□□ -1.3
PDZRN4-203ENST00000539469 NBPF12Q5TAG4 269 aaPredicted RBP6.93□□□□□ -1.3
PDZRN4-203ENST00000539469 NBPF11Q86T75 865 aa6.93□□□□□ -1.3
PDZRN4-203ENST00000539469 DGKHQ86XP1 1220 aa6.93□□□□□ -1.3
PDZRN4-203ENST00000539469 SIAH1Q8IUQ4 282 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms