RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 IRF6O14896 467 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 EDIL3O43854 480 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 ATP2B1P20020 1258 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 USP14P54578 494 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 KRT85P78386 507 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 PPATQ06203 517 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 MOGSQ13724 837 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 GNL2Q13823 731 aaKnown RBP10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 PTPAQ15257 358 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 MTFR1Q15390 333 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 UBE2SQ16763 222 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 USH1GQ495M9 461 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 TREML2Q5T2D2 321 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 JAKMIP3Q5VZ66 844 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 PIK3AP1Q6ZUJ8 805 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 FBXO11Q86XK2 927 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 ERO1BQ86YB8 467 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 GPT2Q8TD30 523 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 LPAR1Q92633 364 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 OPTNQ96CV9 577 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 ATG4CQ96DT6 458 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 ZNF396Q96N95 335 aaPredicted RBP10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 P2RX7Q99572 595 aaKnown RBP10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 PTPN18Q99952 460 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 SLF1Q9BQI6 1058 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 TANGO6Q9C0B7 1094 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 RTEL1Q9NZ71 1219 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 RAPGEFL1Q9UHV5 662 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 PCDHB6Q9Y5E3 794 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 PCDHA1Q9Y5I3 950 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 MRVI1Q9Y6F6 885 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 ZNF536O15090 1300 aa10.51□□□□□ -0.73
RTN4IP1-204ENST00000539449 ESYT2A0FGR8 921 aa10.5□□□□□ -0.73
RTN4IP1-204ENST00000539449 DDX11L8A8MPP1 907 aa10.5□□□□□ -0.73
RTN4IP1-204ENST00000539449 hCG_1984214I3L0E3 225 aa10.5□□□□□ -0.73
RTN4IP1-204ENST00000539449 PEX10O60683 326 aa10.5□□□□□ -0.73
RTN4IP1-204ENST00000539449 FLOT1O75955 427 aa10.5□□□□□ -0.73
RTN4IP1-204ENST00000539449 CALML3P27482 149 aa10.5□□□□□ -0.73
RTN4IP1-204ENST00000539449 PLA2G5P39877 138 aa10.5□□□□□ -0.73
RTN4IP1-204ENST00000539449 PPIL2Q13356 520 aa10.5□□□□□ -0.73
RTN4IP1-204ENST00000539449 SF3A1Q15459 793 aaKnown RBP10.5□□□□□ -0.73
RTN4IP1-204ENST00000539449 ANO1Q5XXA6 986 aa10.5□□□□□ -0.73
RTN4IP1-204ENST00000539449 POTEEQ6S8J3 1075 aa10.5□□□□□ -0.73
RTN4IP1-204ENST00000539449 CATSPERGQ6ZRH7 1159 aa10.5□□□□□ -0.73
RTN4IP1-204ENST00000539449 ZNF713Q8N859 430 aaPredicted RBP10.5□□□□□ -0.73
RTN4IP1-204ENST00000539449 PRPF38AQ8NAV1 312 aaKnown RBP10.5□□□□□ -0.73
RTN4IP1-204ENST00000539449 CCDC148Q8NFR7 591 aa10.5□□□□□ -0.73
RTN4IP1-204ENST00000539449 SPDYE1Q8NFV5 336 aaPredicted RBP10.5□□□□□ -0.73
RTN4IP1-204ENST00000539449 SPATA32Q96LK8 384 aa10.5□□□□□ -0.73
RTN4IP1-204ENST00000539449 AGBL1Q96MI9 1066 aa10.5□□□□□ -0.73
RTN4IP1-204ENST00000539449 AMNQ9BXJ7 453 aa10.5□□□□□ -0.73
RTN4IP1-204ENST00000539449 RAVER2Q9HCJ3 691 aaKnown RBP10.5□□□□□ -0.73
RTN4IP1-204ENST00000539449 C6orf50Q9HD87 102 aa10.5□□□□□ -0.73
RTN4IP1-204ENST00000539449 RIC8AQ9NPQ8 531 aa10.5□□□□□ -0.73
RTN4IP1-204ENST00000539449 PPP1R9AQ9ULJ8 1098 aa10.5□□□□□ -0.73
RTN4IP1-204ENST00000539449 KCNH4Q9UQ05 1017 aa10.5□□□□□ -0.73
RTN4IP1-204ENST00000539449 ALPK3Q96L96 1907 aa10.5□□□□□ -0.73
RTN4IP1-204ENST00000539449 A0A0G2JLL6 359 aaPredicted RBP10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 USP17L15C9J2P7 530 aa10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 USP17L13C9JLJ4 530 aa10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 USP17L11C9JVI0 530 aa10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 USP17L18D6R9N7 530 aa10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 USP17L22D6RA61 530 aa10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 USP17L17D6RBQ6 530 aa10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 USP17L19D6RCP7 530 aa10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 USP17L20D6RJB6 530 aa10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 CXCL11O14625 94 aa10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 TRAK2O60296 914 aa10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 EVI5O60447 810 aa10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 BMP8BP34820 402 aa10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 GJA8P48165 433 aa10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 NASPP49321 788 aaPredicted RBP10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 CLK2P49760 499 aaKnown RBP10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 ADCY7P51828 1080 aa10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 USP17L24Q0WX57 530 aa10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 ZNF174Q15697 407 aa10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 LRIT3Q3SXY7 679 aa10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 GALNT17Q6IS24 598 aa10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 PPP1R18Q6NYC8 613 aa10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 USP17L6PQ6QN14 398 aa10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 GADL1Q6ZQY3 521 aa10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 PRRT2Q7Z6L0 340 aaPredicted RBP10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 LINC00301Q8NCQ3 95 aa10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 REPS2Q8NFH8 660 aa10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 TMOD4Q9NZQ9 345 aa10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 RPTORQ8N122 1335 aa10.49□□□□□ -0.73
RTN4IP1-204ENST00000539449 A0A0G2JMZ2 1700 aa10.48□□□□□ -0.73
RTN4IP1-204ENST00000539449 TESPA1A2RU30 521 aaPredicted RBP10.48□□□□□ -0.73
RTN4IP1-204ENST00000539449 GOLGA6L22H0YM25 854 aa10.48□□□□□ -0.73
RTN4IP1-204ENST00000539449 MEIS2O14770 477 aa10.48□□□□□ -0.73
RTN4IP1-204ENST00000539449 MARCKSP29966 332 aaPredicted RBP10.48□□□□□ -0.73
RTN4IP1-204ENST00000539449 SLC39A14Q15043 492 aa10.48□□□□□ -0.73
RTN4IP1-204ENST00000539449 STK38Q15208 465 aa10.48□□□□□ -0.73
RTN4IP1-204ENST00000539449 INF2Q27J81 1249 aa10.48□□□□□ -0.73
RTN4IP1-204ENST00000539449 ATL3Q6DD88 541 aa10.48□□□□□ -0.73
RTN4IP1-204ENST00000539449 GPAT2Q6NUI2 795 aa10.48□□□□□ -0.73
RTN4IP1-204ENST00000539449 CPXCR1Q8N123 301 aa10.48□□□□□ -0.73
RTN4IP1-204ENST00000539449 FAM177A1Q8N128 213 aaPredicted RBP10.48□□□□□ -0.73
RTN4IP1-204ENST00000539449 CCDC12Q8WUD4 166 aaPredicted RBP10.48□□□□□ -0.73
RTN4IP1-204ENST00000539449 FAM122AQ96E09 287 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms