RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 IQSEC1Q6DN90 963 aa22.27■■□□□ 1.16
TNFRSF1A-212ENST00000539372 ANKRD33Q7Z3H0 272 aa22.27■■□□□ 1.16
TNFRSF1A-212ENST00000539372 STAG2Q8N3U4 1231 aa22.27■■□□□ 1.16
TNFRSF1A-212ENST00000539372 AP5M1Q9H0R1 490 aa22.27■■□□□ 1.16
TNFRSF1A-212ENST00000539372 TMEM39AQ9NV64 488 aa22.27■■□□□ 1.16
TNFRSF1A-212ENST00000539372 ELP1O95163 1332 aa22.27■■□□□ 1.16
TNFRSF1A-212ENST00000539372 NKX3-2P78367 333 aa22.26■■□□□ 1.15
TNFRSF1A-212ENST00000539372 FSCN1Q16658 493 aaKnown RBP22.26■■□□□ 1.15
TNFRSF1A-212ENST00000539372 QRICH1Q2TAL8 776 aa22.26■■□□□ 1.15
TNFRSF1A-212ENST00000539372 TOX2Q96NM4 488 aa22.26■■□□□ 1.15
TNFRSF1A-212ENST00000539372 JMJD4Q9H9V9 463 aa22.26■■□□□ 1.15
TNFRSF1A-212ENST00000539372 A0A0U1RQG5 324 aaPredicted RBP22.25■■□□□ 1.15
TNFRSF1A-212ENST00000539372 KIAA0355O15063 1070 aa22.25■■□□□ 1.15
TNFRSF1A-212ENST00000539372 SHHQ15465 462 aa22.25■■□□□ 1.15
TNFRSF1A-212ENST00000539372 C9orf50Q5SZB4 431 aa22.25■■□□□ 1.15
TNFRSF1A-212ENST00000539372 CXCL17Q6UXB2 119 aa22.25■■□□□ 1.15
TNFRSF1A-212ENST00000539372 SKAP1Q86WV1 359 aa22.25■■□□□ 1.15
TNFRSF1A-212ENST00000539372 SENP2Q9HC62 589 aa22.25■■□□□ 1.15
TNFRSF1A-212ENST00000539372 E7EWF7 191 aa22.24■■□□□ 1.15
TNFRSF1A-212ENST00000539372 ARVCFO00192 962 aa22.24■■□□□ 1.15
TNFRSF1A-212ENST00000539372 IFIT3O14879 490 aaKnown RBP22.24■■□□□ 1.15
TNFRSF1A-212ENST00000539372 RAG1P15918 1043 aa22.24■■□□□ 1.15
TNFRSF1A-212ENST00000539372 CDK7P50613 346 aa22.24■■□□□ 1.15
TNFRSF1A-212ENST00000539372 PDE4DQ08499 809 aa22.24■■□□□ 1.15
TNFRSF1A-212ENST00000539372 STOX1Q6ZVD7 989 aa22.24■■□□□ 1.15
TNFRSF1A-212ENST00000539372 Q7L0L9 218 aa22.24■■□□□ 1.15
TNFRSF1A-212ENST00000539372 CHST3Q7LGC8 479 aa22.24■■□□□ 1.15
TNFRSF1A-212ENST00000539372 RALYLQ86SE5 291 aaKnown RBP22.24■■□□□ 1.15
TNFRSF1A-212ENST00000539372 TBC1D5Q92609 795 aa22.24■■□□□ 1.15
TNFRSF1A-212ENST00000539372 WDR11Q9BZH6 1224 aa22.24■■□□□ 1.15
TNFRSF1A-212ENST00000539372 ABCB11O95342 1321 aa22.24■■□□□ 1.15
TNFRSF1A-212ENST00000539372 LOC102724159A0A0B4J2E5 919 aa22.23■■□□□ 1.15
TNFRSF1A-212ENST00000539372 PWP2Q15269 919 aaKnown RBP22.23■■□□□ 1.15
TNFRSF1A-212ENST00000539372 DUSP28Q4G0W2 176 aa22.23■■□□□ 1.15
TNFRSF1A-212ENST00000539372 FBXO11Q86XK2 927 aa22.23■■□□□ 1.15
TNFRSF1A-212ENST00000539372 DNERQ8NFT8 737 aa22.23■■□□□ 1.15
TNFRSF1A-212ENST00000539372 NCOA7Q8NI08 942 aa22.23■■□□□ 1.15
TNFRSF1A-212ENST00000539372 MAP4K1Q92918 833 aa22.23■■□□□ 1.15
TNFRSF1A-212ENST00000539372 MAD2L2Q9UI95 211 aa22.23■■□□□ 1.15
TNFRSF1A-212ENST00000539372 Q9Y3F1 56 aa22.23■■□□□ 1.15
TNFRSF1A-212ENST00000539372 RBM8AQ9Y5S9 174 aaKnown RBP22.23■■□□□ 1.15
TNFRSF1A-212ENST00000539372 MROH7Q68CQ1 1323 aa22.23■■□□□ 1.15
TNFRSF1A-212ENST00000539372 KLRF2D3W0D1 207 aa22.22■■□□□ 1.15
TNFRSF1A-212ENST00000539372 ZEB2O60315 1214 aa22.22■■□□□ 1.15
TNFRSF1A-212ENST00000539372 GPR153Q6NV75 609 aa22.22■■□□□ 1.15
TNFRSF1A-212ENST00000539372 DEFB123Q8N688 67 aa22.22■■□□□ 1.15
TNFRSF1A-212ENST00000539372 RGS22Q8NE09 1264 aa22.22■■□□□ 1.15
TNFRSF1A-212ENST00000539372 MPHOSPH6Q99547 160 aaKnown RBP22.22■■□□□ 1.15
TNFRSF1A-212ENST00000539372 RBM47A0AV96 593 aaKnown RBP22.21■■□□□ 1.15
TNFRSF1A-212ENST00000539372 ERICH2A1L162 156 aa22.21■■□□□ 1.15
TNFRSF1A-212ENST00000539372 EDNRBP24530 442 aa22.21■■□□□ 1.15
TNFRSF1A-212ENST00000539372 EPHB4P54760 987 aa22.21■■□□□ 1.15
TNFRSF1A-212ENST00000539372 WTAPQ15007 396 aa22.21■■□□□ 1.15
TNFRSF1A-212ENST00000539372 SYTL5Q8TDW5 730 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF1A-212ENST00000539372 TAAR1Q96RJ0 339 aa22.21■■□□□ 1.15
TNFRSF1A-212ENST00000539372 COL20A1Q9P218 1284 aa22.21■■□□□ 1.15
TNFRSF1A-212ENST00000539372 TBX21Q9UL17 535 aa22.21■■□□□ 1.15
TNFRSF1A-212ENST00000539372 MRPL11Q9Y3B7 192 aaKnown RBP22.21■■□□□ 1.15
TNFRSF1A-212ENST00000539372 PALM3A6NDB9 673 aaPredicted RBP22.2■■□□□ 1.14
TNFRSF1A-212ENST00000539372 CABYRO75952 493 aa22.2■■□□□ 1.14
TNFRSF1A-212ENST00000539372 ANTXR2P58335 489 aa22.2■■□□□ 1.14
TNFRSF1A-212ENST00000539372 PSMC6P62333 389 aa22.2■■□□□ 1.14
TNFRSF1A-212ENST00000539372 MCF2L2Q86YR7 1114 aa22.2■■□□□ 1.14
TNFRSF1A-212ENST00000539372 FAM126BQ8IXS8 530 aa22.2■■□□□ 1.14
TNFRSF1A-212ENST00000539372 PPP1R11O60927 126 aaPredicted RBP22.19■■□□□ 1.14
TNFRSF1A-212ENST00000539372 TIMP1P01033 207 aa22.19■■□□□ 1.14
TNFRSF1A-212ENST00000539372 FPGSQ05932 587 aa22.19■■□□□ 1.14
TNFRSF1A-212ENST00000539372 ITGA7Q13683 1181 aa22.19■■□□□ 1.14
TNFRSF1A-212ENST00000539372 GRM4Q14833 912 aa22.19■■□□□ 1.14
TNFRSF1A-212ENST00000539372 SART3Q15020 963 aaKnown RBP22.19■■□□□ 1.14
TNFRSF1A-212ENST00000539372 PPP2R5BQ15173 497 aa22.19■■□□□ 1.14
TNFRSF1A-212ENST00000539372 TMEM67Q5HYA8 995 aa22.19■■□□□ 1.14
TNFRSF1A-212ENST00000539372 OR6J1Q8NGC5 347 aa22.19■■□□□ 1.14
TNFRSF1A-212ENST00000539372 ESYT1Q9BSJ8 1104 aa22.19■■□□□ 1.14
TNFRSF1A-212ENST00000539372 AMNQ9BXJ7 453 aa22.19■■□□□ 1.14
TNFRSF1A-212ENST00000539372 LSG1Q9H089 658 aaKnown RBP22.19■■□□□ 1.14
TNFRSF1A-212ENST00000539372 GRIN2DO15399 1336 aa22.18■■□□□ 1.14
TNFRSF1A-212ENST00000539372 B4DLN1 442 aa22.18■■□□□ 1.14
TNFRSF1A-212ENST00000539372 TLR3O15455 904 aaKnown RBP22.18■■□□□ 1.14
TNFRSF1A-212ENST00000539372 MRPL12P52815 198 aaKnown RBP22.18■■□□□ 1.14
TNFRSF1A-212ENST00000539372 SLC35G1Q2M3R5 365 aa22.18■■□□□ 1.14
TNFRSF1A-212ENST00000539372 CENPQQ7L2Z9 268 aaPredicted RBP22.18■■□□□ 1.14
TNFRSF1A-212ENST00000539372 HOMER1Q86YM7 354 aa22.18■■□□□ 1.14
TNFRSF1A-212ENST00000539372 MB21D2Q8IYB1 491 aaPredicted RBP22.18■■□□□ 1.14
TNFRSF1A-212ENST00000539372 SCFD2Q8WU76 684 aa22.18■■□□□ 1.14
TNFRSF1A-212ENST00000539372 COPS5Q92905 334 aa22.18■■□□□ 1.14
TNFRSF1A-212ENST00000539372 MTMR8Q96EF0 704 aa22.18■■□□□ 1.14
TNFRSF1A-212ENST00000539372 ZBTB5O15062 677 aa22.17■■□□□ 1.14
TNFRSF1A-212ENST00000539372 CFBP00751 764 aa22.17■■□□□ 1.14
TNFRSF1A-212ENST00000539372 MYL3P08590 195 aa22.17■■□□□ 1.14
TNFRSF1A-212ENST00000539372 SLC43A3Q8NBI5 491 aa22.17■■□□□ 1.14
TNFRSF1A-212ENST00000539372 IGDCC4Q8TDY8 1250 aa22.17■■□□□ 1.14
TNFRSF1A-212ENST00000539372 NSUN6Q8TEA1 469 aaKnown RBP22.17■■□□□ 1.14
TNFRSF1A-212ENST00000539372 RMDN3Q96TC7 470 aa22.17■■□□□ 1.14
TNFRSF1A-212ENST00000539372 PPP1R12CQ9BZL4 782 aa22.17■■□□□ 1.14
TNFRSF1A-212ENST00000539372 MAF1Q9H063 256 aa22.17■■□□□ 1.14
TNFRSF1A-212ENST00000539372 GPHNQ9NQX3 736 aaPredicted RBP22.17■■□□□ 1.14
TNFRSF1A-212ENST00000539372 OPLAHO14841 1288 aa22.16■■□□□ 1.14
TNFRSF1A-212ENST00000539372 ARIH2O95376 493 aa22.16■■□□□ 1.14
TNFRSF1A-212ENST00000539372 CD4P01730 458 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms