RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 MAF1Q9H063 256 aa17.56■□□□□ 0.4
VAMP1-207ENST00000539047 HOMER2Q9NSB8 354 aa17.56■□□□□ 0.4
VAMP1-207ENST00000539047 RNF146Q9NTX7 359 aa17.56■□□□□ 0.4
VAMP1-207ENST00000539047 TMEM260Q9NX78 707 aa17.56■□□□□ 0.4
VAMP1-207ENST00000539047 RCOR1Q9UKL0 485 aa17.56■□□□□ 0.4
VAMP1-207ENST00000539047 TLL2Q9Y6L7 1015 aa17.56■□□□□ 0.4
VAMP1-207ENST00000539047 FAM205CA6NFA0 338 aa17.55■□□□□ 0.4
VAMP1-207ENST00000539047 STAT3P40763 770 aa17.55■□□□□ 0.4
VAMP1-207ENST00000539047 CLK2P49760 499 aaKnown RBP17.55■□□□□ 0.4
VAMP1-207ENST00000539047 SLC39A14Q15043 492 aa17.55■□□□□ 0.4
VAMP1-207ENST00000539047 LINC00301Q8NCQ3 95 aa17.55■□□□□ 0.4
VAMP1-207ENST00000539047 TBCKQ8TEA7 893 aa17.55■□□□□ 0.4
VAMP1-207ENST00000539047 CCDC102AQ96A19 550 aa17.55■□□□□ 0.4
VAMP1-207ENST00000539047 TRERF1Q96PN7 1200 aa17.55■□□□□ 0.4
VAMP1-207ENST00000539047 PARK7Q99497 189 aaKnown RBP17.55■□□□□ 0.4
VAMP1-207ENST00000539047 FTOQ9C0B1 505 aaKnown RBP eCLIP17.55■□□□□ 0.4
VAMP1-207ENST00000539047 ACAD9Q9H845 621 aa17.55■□□□□ 0.4
VAMP1-207ENST00000539047 LMBRD1Q9NUN5 540 aa17.55■□□□□ 0.4
VAMP1-207ENST00000539047 FBXO40Q9UH90 709 aa17.55■□□□□ 0.4
VAMP1-207ENST00000539047 RABGAP1Q9Y3P9 1069 aa17.55■□□□□ 0.4
VAMP1-207ENST00000539047 DDX49Q9Y6V7 483 aaKnown RBP17.55■□□□□ 0.4
VAMP1-207ENST00000539047 SMCHD1A6NHR9 2005 aa17.55■□□□□ 0.4
VAMP1-207ENST00000539047 LAD1O00515 517 aa17.54■□□□□ 0.4
VAMP1-207ENST00000539047 PPP6R2O75170 966 aa17.54■□□□□ 0.4
VAMP1-207ENST00000539047 GCFC2P16383 781 aaKnown RBP17.54■□□□□ 0.4
VAMP1-207ENST00000539047 MCM7P33993 719 aa17.54■□□□□ 0.4
VAMP1-207ENST00000539047 TMEM132BQ14DG7 1078 aa17.54■□□□□ 0.4
VAMP1-207ENST00000539047 LETM2Q2VYF4 491 aa17.54■□□□□ 0.4
VAMP1-207ENST00000539047 GPAT2Q6NUI2 795 aa17.54■□□□□ 0.4
VAMP1-207ENST00000539047 USP17L6PQ6QN14 398 aa17.54■□□□□ 0.4
VAMP1-207ENST00000539047 PAXIP1Q6ZW49 1069 aaPredicted RBP17.54■□□□□ 0.4
VAMP1-207ENST00000539047 CHST13Q8NET6 341 aa17.54■□□□□ 0.4
VAMP1-207ENST00000539047 REPS2Q8NFH8 660 aa17.54■□□□□ 0.4
VAMP1-207ENST00000539047 HHIPL1Q96JK4 782 aa17.54■□□□□ 0.4
VAMP1-207ENST00000539047 PAGR1Q9BTK6 254 aa17.54■□□□□ 0.4
VAMP1-207ENST00000539047 ZNF214Q9UL59 606 aaPredicted RBP17.54■□□□□ 0.4
VAMP1-207ENST00000539047 PCDHB6Q9Y5E3 794 aa17.54■□□□□ 0.4
VAMP1-207ENST00000539047 PDHXO00330 501 aa17.53■□□□□ 0.4
VAMP1-207ENST00000539047 MEIS2O14770 477 aa17.53■□□□□ 0.4
VAMP1-207ENST00000539047 CCNT1O60563 726 aaKnown RBP17.53■□□□□ 0.4
VAMP1-207ENST00000539047 SLC25A27O95847 323 aa17.53■□□□□ 0.4
VAMP1-207ENST00000539047 SLC10A3P09131 477 aa17.53■□□□□ 0.4
VAMP1-207ENST00000539047 TOB1P50616 345 aaPredicted RBP17.53■□□□□ 0.4
VAMP1-207ENST00000539047 SREBF2Q12772 1141 aa17.53■□□□□ 0.4
VAMP1-207ENST00000539047 MOGSQ13724 837 aa17.53■□□□□ 0.4
VAMP1-207ENST00000539047 EARS2Q5JPH6 523 aaKnown RBP17.53■□□□□ 0.4
VAMP1-207ENST00000539047 FCHSD1Q86WN1 690 aa17.53■□□□□ 0.4
VAMP1-207ENST00000539047 SYAP1Q96A49 352 aaPredicted RBP17.53■□□□□ 0.4
VAMP1-207ENST00000539047 MS4A4AQ96JQ5 239 aa17.53■□□□□ 0.4
VAMP1-207ENST00000539047 P2RX7Q99572 595 aaKnown RBP17.53■□□□□ 0.4
VAMP1-207ENST00000539047 ANP32EQ9BTT0 268 aa17.53■□□□□ 0.4
VAMP1-207ENST00000539047 ZCCHC17Q9NP64 241 aaKnown RBP17.53■□□□□ 0.4
VAMP1-207ENST00000539047 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.53■□□□□ 0.4
VAMP1-207ENST00000539047 CREBZFQ9NS37 354 aa17.53■□□□□ 0.4
VAMP1-207ENST00000539047 MORC2Q9Y6X9 1032 aaPredicted RBP17.53■□□□□ 0.4
VAMP1-207ENST00000539047 BTBD19C9JJ37 291 aa17.52■□□□□ 0.4
VAMP1-207ENST00000539047 NEMFO60524 1076 aa17.52■□□□□ 0.4
VAMP1-207ENST00000539047 CUTAO60888 179 aa17.52■□□□□ 0.4
VAMP1-207ENST00000539047 TAL1P17542 331 aaPredicted RBP17.52■□□□□ 0.4
VAMP1-207ENST00000539047 HOXA13P31271 388 aaPredicted RBP17.52■□□□□ 0.4
VAMP1-207ENST00000539047 GCLCP48506 637 aaPredicted RBP17.52■□□□□ 0.4
VAMP1-207ENST00000539047 HSD17B4P51659 736 aa17.52■□□□□ 0.4
VAMP1-207ENST00000539047 INHBEP58166 350 aa17.52■□□□□ 0.4
VAMP1-207ENST00000539047 CCNA1P78396 465 aa17.52■□□□□ 0.4
VAMP1-207ENST00000539047 ZNF174Q15697 407 aa17.52■□□□□ 0.4
VAMP1-207ENST00000539047 NOM1Q5C9Z4 860 aaKnown RBP17.52■□□□□ 0.4
VAMP1-207ENST00000539047 NSMFQ6X4W1 530 aa17.52■□□□□ 0.4
VAMP1-207ENST00000539047 RNF207Q6ZRF8 634 aa17.52■□□□□ 0.4
VAMP1-207ENST00000539047 CCDC73Q6ZRK6 1079 aa17.52■□□□□ 0.4
VAMP1-207ENST00000539047 KRI1Q8N9T8 703 aaKnown RBP17.52■□□□□ 0.4
VAMP1-207ENST00000539047 BRI3BPQ8WY22 251 aa17.52■□□□□ 0.4
VAMP1-207ENST00000539047 FERMT2Q96AC1 680 aa17.52■□□□□ 0.4
VAMP1-207ENST00000539047 PGBD1Q96JS3 809 aa17.52■□□□□ 0.4
VAMP1-207ENST00000539047 PFASO15067 1338 aa17.51■□□□□ 0.39
VAMP1-207ENST00000539047 NFIBO00712 420 aa17.51■□□□□ 0.39
VAMP1-207ENST00000539047 OPLAHO14841 1288 aa17.51■□□□□ 0.39
VAMP1-207ENST00000539047 TRAK2O60296 914 aa17.51■□□□□ 0.39
VAMP1-207ENST00000539047 MARCH6O60337 910 aa17.51■□□□□ 0.39
VAMP1-207ENST00000539047 ZNF76P36508 570 aa17.51■□□□□ 0.39
VAMP1-207ENST00000539047 USP11P51784 963 aa17.51■□□□□ 0.39
VAMP1-207ENST00000539047 PTPAQ15257 358 aa17.51■□□□□ 0.39
VAMP1-207ENST00000539047 TPRNQ4KMQ1 711 aa17.51■□□□□ 0.39
VAMP1-207ENST00000539047 COL13A1Q5TAT6 717 aaPredicted RBP17.51■□□□□ 0.39
VAMP1-207ENST00000539047 RIOX2Q8IUF8 465 aa17.51■□□□□ 0.39
VAMP1-207ENST00000539047 CCAR1Q8IX12 1150 aaKnown RBP17.51■□□□□ 0.39
VAMP1-207ENST00000539047 CLEC4DQ8WXI8 215 aa17.51■□□□□ 0.39
VAMP1-207ENST00000539047 SPATC1LQ9H0A9 340 aa17.51■□□□□ 0.39
VAMP1-207ENST00000539047 ADAMTS3O15072 1205 aa17.5■□□□□ 0.39
VAMP1-207ENST00000539047 MARCKSP29966 332 aaPredicted RBP17.5■□□□□ 0.39
VAMP1-207ENST00000539047 SREBF1P36956 1147 aa17.5■□□□□ 0.39
VAMP1-207ENST00000539047 ARHGAP4P98171 946 aa17.5■□□□□ 0.39
VAMP1-207ENST00000539047 ATP2C1P98194 919 aaPredicted RBP17.5■□□□□ 0.39
VAMP1-207ENST00000539047 GHRHRQ02643 423 aa17.5■□□□□ 0.39
VAMP1-207ENST00000539047 KLHL40Q2TBA0 621 aa17.5■□□□□ 0.39
VAMP1-207ENST00000539047 MUM1L1Q5H9M0 696 aa17.5■□□□□ 0.39
VAMP1-207ENST00000539047 ARL6IP4Q66PJ3 421 aaKnown RBP17.5■□□□□ 0.39
VAMP1-207ENST00000539047 MOXD1Q6UVY6 613 aa17.5■□□□□ 0.39
VAMP1-207ENST00000539047 NCAPG2Q86XI2 1143 aa17.5■□□□□ 0.39
VAMP1-207ENST00000539047 PLXNB2O15031 1838 aa17.49■□□□□ 0.39
VAMP1-207ENST00000539047 A0A1W2PQ27 194 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms