RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 MFSD6Q6ZSS7 791 aa14.72□□□□□ -0.05
VAMP1-206ENST00000538970 C16orf59Q7L2K0 433 aa14.72□□□□□ -0.05
VAMP1-206ENST00000538970 CHD1LQ86WJ1 897 aa14.72□□□□□ -0.05
VAMP1-206ENST00000538970 PLEKHM2Q8IWE5 1019 aa14.72□□□□□ -0.05
VAMP1-206ENST00000538970 TTC14Q96N46 770 aa14.72□□□□□ -0.05
VAMP1-206ENST00000538970 PPP1R12CQ9BZL4 782 aa14.72□□□□□ -0.05
VAMP1-206ENST00000538970 RWDD1Q9H446 243 aaPredicted RBP14.72□□□□□ -0.05
VAMP1-206ENST00000538970 OSBPL3Q9H4L5 887 aa14.72□□□□□ -0.05
VAMP1-206ENST00000538970 ADD3Q9UEY8 706 aaKnown RBP14.72□□□□□ -0.05
VAMP1-206ENST00000538970 Q9Y3F1 56 aa14.72□□□□□ -0.05
VAMP1-206ENST00000538970 GRIN2DO15399 1336 aa14.71□□□□□ -0.05
VAMP1-206ENST00000538970 WDR19Q8NEZ3 1342 aa14.71□□□□□ -0.05
VAMP1-206ENST00000538970 LOC102724159A0A0B4J2E5 919 aa14.71□□□□□ -0.05
VAMP1-206ENST00000538970 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.71□□□□□ -0.05
VAMP1-206ENST00000538970 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.71□□□□□ -0.05
VAMP1-206ENST00000538970 DNAJB2P25686 324 aa14.71□□□□□ -0.05
VAMP1-206ENST00000538970 ITGA7Q13683 1181 aa14.71□□□□□ -0.05
VAMP1-206ENST00000538970 PWP2Q15269 919 aaKnown RBP14.71□□□□□ -0.05
VAMP1-206ENST00000538970 RASIP1Q5U651 963 aa14.71□□□□□ -0.05
VAMP1-206ENST00000538970 TMEM199Q8N511 208 aa14.71□□□□□ -0.05
VAMP1-206ENST00000538970 ADAMTS19Q8TE59 1207 aa14.71□□□□□ -0.05
VAMP1-206ENST00000538970 CLEC4DQ8WXI8 215 aa14.71□□□□□ -0.05
VAMP1-206ENST00000538970 PPM1EQ8WY54 764 aa14.71□□□□□ -0.05
VAMP1-206ENST00000538970 ESR2Q92731 530 aa14.71□□□□□ -0.05
VAMP1-206ENST00000538970 RNF41Q9H4P4 317 aaPredicted RBP14.71□□□□□ -0.05
VAMP1-206ENST00000538970 PNMA2Q9UL42 364 aa14.71□□□□□ -0.05
VAMP1-206ENST00000538970 LAMA4Q16363 1823 aa14.71□□□□□ -0.06
VAMP1-206ENST00000538970 PTPDC1A2A3K4 754 aa14.7□□□□□ -0.06
VAMP1-206ENST00000538970 ZEB2O60315 1214 aa14.7□□□□□ -0.06
VAMP1-206ENST00000538970 IGHDP01880 384 aa14.7□□□□□ -0.06
VAMP1-206ENST00000538970 NUCB1Q02818 461 aa14.7□□□□□ -0.06
VAMP1-206ENST00000538970 DUSP28Q4G0W2 176 aa14.7□□□□□ -0.06
VAMP1-206ENST00000538970 TMEM240Q5SV17 173 aa14.7□□□□□ -0.06
VAMP1-206ENST00000538970 PSRC1Q6PGN9 363 aaPredicted RBP14.7□□□□□ -0.06
VAMP1-206ENST00000538970 KIAA1211Q6ZU35 1233 aa14.7□□□□□ -0.06
VAMP1-206ENST00000538970 SEZ6LQ9BYH1 1024 aa14.7□□□□□ -0.06
VAMP1-206ENST00000538970 UMODL1Q5DID0 1318 aa14.69□□□□□ -0.06
VAMP1-206ENST00000538970 RBM47A0AV96 593 aaKnown RBP14.69□□□□□ -0.06
VAMP1-206ENST00000538970 ZNF213O14771 459 aa14.69□□□□□ -0.06
VAMP1-206ENST00000538970 CALML3P27482 149 aa14.69□□□□□ -0.06
VAMP1-206ENST00000538970 CYP2C18P33260 490 aa14.69□□□□□ -0.06
VAMP1-206ENST00000538970 NT5C2P49902 561 aa14.69□□□□□ -0.06
VAMP1-206ENST00000538970 PSMC6P62333 389 aa14.69□□□□□ -0.06
VAMP1-206ENST00000538970 GPATCH4Q5T3I0 446 aaKnown RBP14.69□□□□□ -0.06
VAMP1-206ENST00000538970 CWC27Q6UX04 472 aaKnown RBP14.69□□□□□ -0.06
VAMP1-206ENST00000538970 RNF207Q6ZRF8 634 aa14.69□□□□□ -0.06
VAMP1-206ENST00000538970 DGKHQ86XP1 1220 aa14.69□□□□□ -0.06
VAMP1-206ENST00000538970 YTHDC1Q96MU7 727 aaKnown RBP14.69□□□□□ -0.06
VAMP1-206ENST00000538970 ASB2Q96Q27 587 aa14.69□□□□□ -0.06
VAMP1-206ENST00000538970 ZKSCAN3Q9BRR0 538 aa14.69□□□□□ -0.06
VAMP1-206ENST00000538970 HIPK3Q9H422 1215 aa14.69□□□□□ -0.06
VAMP1-206ENST00000538970 B4GALT4O60513 344 aa14.68□□□□□ -0.06
VAMP1-206ENST00000538970 GOLGA8HP0CJ92 632 aa14.68□□□□□ -0.06
VAMP1-206ENST00000538970 ACRP10323 421 aa14.68□□□□□ -0.06
VAMP1-206ENST00000538970 EDNRBP24530 442 aa14.68□□□□□ -0.06
VAMP1-206ENST00000538970 RPS6P62753 249 aaKnown RBP14.68□□□□□ -0.06
VAMP1-206ENST00000538970 ZNF365Q70YC5 407 aa14.68□□□□□ -0.06
VAMP1-206ENST00000538970 TIFAQ96CG3 184 aa14.68□□□□□ -0.06
VAMP1-206ENST00000538970 UHRF1Q96T88 793 aaPredicted RBP14.68□□□□□ -0.06
VAMP1-206ENST00000538970 WDR11Q9BZH6 1224 aa14.68□□□□□ -0.06
VAMP1-206ENST00000538970 TRPV6Q9H1D0 765 aa14.68□□□□□ -0.06
VAMP1-206ENST00000538970 IL23AQ9NPF7 189 aa14.68□□□□□ -0.06
VAMP1-206ENST00000538970 DIAPH3Q9NSV4 1193 aa14.68□□□□□ -0.06
VAMP1-206ENST00000538970 KDM4AO75164 1064 aa14.67□□□□□ -0.06
VAMP1-206ENST00000538970 PNMA1Q8ND90 353 aa14.67□□□□□ -0.06
VAMP1-206ENST00000538970 EXOC6Q8TAG9 804 aa14.67□□□□□ -0.06
VAMP1-206ENST00000538970 ATXN2LQ8WWM7 1075 aaKnown RBP14.67□□□□□ -0.06
VAMP1-206ENST00000538970 NECAB3Q96P71 396 aaPredicted RBP14.67□□□□□ -0.06
VAMP1-206ENST00000538970 NOC4LQ9BVI4 516 aaKnown RBP14.67□□□□□ -0.06
VAMP1-206ENST00000538970 PBX4Q9BYU1 374 aa14.67□□□□□ -0.06
VAMP1-206ENST00000538970 CPVLQ9H3G5 476 aa14.67□□□□□ -0.06
VAMP1-206ENST00000538970 GRXCR1A8MXD5 290 aa14.66□□□□□ -0.06
VAMP1-206ENST00000538970 HIP1O00291 1037 aa14.66□□□□□ -0.06
VAMP1-206ENST00000538970 PBX2P40425 430 aa14.66□□□□□ -0.06
VAMP1-206ENST00000538970 CPT1AP50416 773 aa14.66□□□□□ -0.06
VAMP1-206ENST00000538970 PURAQ00577 322 aaKnown RBP14.66□□□□□ -0.06
VAMP1-206ENST00000538970 PDE4DQ08499 809 aa14.66□□□□□ -0.06
VAMP1-206ENST00000538970 PPP2R5BQ15173 497 aa14.66□□□□□ -0.06
VAMP1-206ENST00000538970 USH1GQ495M9 461 aa14.66□□□□□ -0.06
VAMP1-206ENST00000538970 CCDC178Q5BJE1 867 aa14.66□□□□□ -0.06
VAMP1-206ENST00000538970 IQCA1Q86XH1 822 aa14.66□□□□□ -0.06
VAMP1-206ENST00000538970 DNERQ8NFT8 737 aa14.66□□□□□ -0.06
VAMP1-206ENST00000538970 OR6J1Q8NGC5 347 aa14.66□□□□□ -0.06
VAMP1-206ENST00000538970 HERVK_113Q902F9 699 aa14.66□□□□□ -0.06
VAMP1-206ENST00000538970 ANKS1AQ92625 1134 aa14.66□□□□□ -0.06
VAMP1-206ENST00000538970 MPHOSPH6Q99547 160 aaKnown RBP14.66□□□□□ -0.06
VAMP1-206ENST00000538970 DSCC1Q9BVC3 393 aa14.66□□□□□ -0.06
VAMP1-206ENST00000538970 UBA5Q9GZZ9 404 aa14.66□□□□□ -0.06
VAMP1-206ENST00000538970 WNT8AQ9H1J5 351 aa14.66□□□□□ -0.06
VAMP1-206ENST00000538970 ALDH8A1Q9H2A2 487 aaPredicted RBP14.66□□□□□ -0.06
VAMP1-206ENST00000538970 ZNF576Q9H609 170 aa14.66□□□□□ -0.06
VAMP1-206ENST00000538970 KAT14Q9H8E8 782 aa14.66□□□□□ -0.06
VAMP1-206ENST00000538970 POLR3EQ9NVU0 708 aa14.66□□□□□ -0.06
VAMP1-206ENST00000538970 THEGQ9P2T0 379 aa14.66□□□□□ -0.06
VAMP1-206ENST00000538970 XIRP2A4UGR9 3374 aa14.66□□□□□ -0.06
VAMP1-206ENST00000538970 B4E1Z4 1266 aa14.65□□□□□ -0.06
VAMP1-206ENST00000538970 NKRFO15226 690 aaKnown RBP eCLIP14.65□□□□□ -0.06
VAMP1-206ENST00000538970 CCL23P55773 120 aa14.65□□□□□ -0.06
VAMP1-206ENST00000538970 CDC37Q16543 378 aaPredicted RBP14.65□□□□□ -0.06
VAMP1-206ENST00000538970 ENAHQ8N8S7 591 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms