RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 MRPS25P82663 173 aaKnown RBP7.54□□□□□ -1.2
SCAPER-203ENST00000538941 CALCOCO2Q13137 446 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 CUL1Q13616 776 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 MAN2A1Q16706 1144 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 ZNF185O15231 689 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 ZPR1O75312 459 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 PDE8BO95263 885 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 MCAMP43121 646 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 FOXO4P98177 505 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 CETN1Q12798 172 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 BIRC3Q13489 604 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 PPP2R5EQ16537 467 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 MMGT1Q8N4V1 131 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 ZNF473Q8WTR7 871 aaKnown RBP7.54□□□□□ -1.2
SCAPER-203ENST00000538941 STAG1Q8WVM7 1258 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 STRBPQ96SI9 672 aaKnown RBP7.54□□□□□ -1.2
SCAPER-203ENST00000538941 MTA3Q9BTC8 594 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 PIH1D3Q9NQM4 214 aaKnown RBP7.54□□□□□ -1.2
SCAPER-203ENST00000538941 DISC1Q9NRI5 854 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 SPATS2LQ9NUQ6 558 aaKnown RBP7.54□□□□□ -1.2
SCAPER-203ENST00000538941 OVOS2A0A0G2JMS6 1433 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 EXOC5O00471 708 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 TBCAO75347 108 aaKnown RBP7.54□□□□□ -1.2
SCAPER-203ENST00000538941 BAG3O95817 575 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 PCP11498 1178 aaKnown RBP7.54□□□□□ -1.2
SCAPER-203ENST00000538941 PCK1P35558 622 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 CETN2P41208 172 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 NFRKBQ6P4R8 1299 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 DYMQ7RTS9 669 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 P3H4Q92791 437 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 EEF2KMTQ96G04 330 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 FAM114A2Q9NRY5 505 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 MCM9Q9NXL9 1143 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 WDR17Q8IZU2 1322 aa7.54□□□□□ -1.2
SCAPER-203ENST00000538941 GMNCA6NCL1 334 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 ELF1P32519 619 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 UBE4AQ14139 1066 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 GALNT17Q6IS24 598 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 CCDC25Q86WR0 208 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 CCHCR1Q8TD31 782 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 CTNNBL1Q8WYA6 563 aaPredicted RBP7.53□□□□□ -1.2
SCAPER-203ENST00000538941 MLXIPQ9HAP2 919 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 NKIRAS1Q9NYS0 192 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 MTUS1Q9ULD2 1270 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 CCDC169A6NNP5 214 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 CETN3O15182 167 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 OR52Z1P0C646 297 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 TXKP42681 527 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 GUCY1A3Q02108 690 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 COL9A3Q14050 684 aaPredicted RBP7.53□□□□□ -1.2
SCAPER-203ENST00000538941 ALX1Q15699 326 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 SEL1L2Q5TEA6 688 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 NT5DC1Q5TFE4 455 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 AP1ARQ63HQ0 302 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 ERMNQ8TAM6 284 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 AK8Q96MA6 479 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 SLC39A2Q9NP94 309 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 PARP2Q9UGN5 583 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 JCADQ9P266 1359 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 GRID2IPA4D2P6 1211 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 PPP1R3GB7ZBB8 358 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 FTCDO95954 541 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 GUCY1A2P33402 732 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 MDH1P40925 334 aaKnown RBP7.53□□□□□ -1.2
SCAPER-203ENST00000538941 POLR2FP61218 127 aaKnown RBP7.53□□□□□ -1.2
SCAPER-203ENST00000538941 ACTN3Q08043 901 aaPredicted RBP7.53□□□□□ -1.2
SCAPER-203ENST00000538941 ZKSCAN8Q15776 578 aaPredicted RBP7.53□□□□□ -1.2
SCAPER-203ENST00000538941 PAPD7Q5XG87 772 aaKnown RBP7.53□□□□□ -1.2
SCAPER-203ENST00000538941 STXBP4Q6ZWJ1 553 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 PBKQ96KB5 322 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 DENND2AQ9ULE3 1009 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 ERBB3P21860 1342 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 LSP1P33241 339 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 ZNF76P36508 570 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 SEMA3FQ13275 785 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 PLCB4Q15147 1175 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 INF2Q27J81 1249 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 TSNAXIP1Q2TAA8 658 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 DCAF17Q5H9S7 520 aaPredicted RBP7.53□□□□□ -1.2
SCAPER-203ENST00000538941 CDKAL1Q5VV42 579 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 HIBCHQ6NVY1 386 aaPredicted RBP7.53□□□□□ -1.2
SCAPER-203ENST00000538941 DZIP3Q86Y13 1208 aaKnown RBP7.53□□□□□ -1.2
SCAPER-203ENST00000538941 IGDCC4Q8TDY8 1250 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 SDR42E1Q8WUS8 393 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 TCP11Q8WWU5 503 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 TRIM6Q9C030 488 aaPredicted RBP7.53□□□□□ -1.2
SCAPER-203ENST00000538941 DPH5Q9H2P9 285 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 INTS13Q9NVM9 706 aa7.53□□□□□ -1.2
SCAPER-203ENST00000538941 NOVA2Q9UNW9 492 aaKnown RBP7.53□□□□□ -1.2
SCAPER-203ENST00000538941 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.53□□□□□ -1.2
SCAPER-203ENST00000538941 FAM237AA0A1B0GTK4 181 aa7.52□□□□□ -1.2
SCAPER-203ENST00000538941 MYO1FO00160 1098 aa7.52□□□□□ -1.2
SCAPER-203ENST00000538941 PGRMC1O00264 195 aaKnown RBP7.52□□□□□ -1.2
SCAPER-203ENST00000538941 CTNND1O60716 968 aaKnown RBP7.52□□□□□ -1.2
SCAPER-203ENST00000538941 RPL13P26373 211 aaKnown RBP7.52□□□□□ -1.2
SCAPER-203ENST00000538941 SLMAPQ14BN4 828 aa7.52□□□□□ -1.2
SCAPER-203ENST00000538941 TMEM139Q8IV31 216 aa7.52□□□□□ -1.2
SCAPER-203ENST00000538941 MYOCDQ8IZQ8 938 aa7.52□□□□□ -1.2
SCAPER-203ENST00000538941 RNF10Q8N5U6 811 aaKnown RBP7.52□□□□□ -1.2
SCAPER-203ENST00000538941 SNX29Q8TEQ0 813 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms