RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 HPS3Q969F9 1004 aa15.96■□□□□ 0.15
ACTN1-205ENST00000538545 TEPSINQ96N21 525 aa15.96■□□□□ 0.15
ACTN1-205ENST00000538545 BPIFA3Q9BQP9 254 aa15.96■□□□□ 0.15
ACTN1-205ENST00000538545 FCHSD1Q86WN1 690 aa15.96■□□□□ 0.15
ACTN1-205ENST00000538545 INPP5BP32019 993 aa15.95■□□□□ 0.14
ACTN1-205ENST00000538545 PRKG1Q13976 671 aa15.95■□□□□ 0.14
ACTN1-205ENST00000538545 TMC6Q7Z403 805 aa15.95■□□□□ 0.14
ACTN1-205ENST00000538545 CYP2W1Q8TAV3 490 aa15.95■□□□□ 0.14
ACTN1-205ENST00000538545 SERPINC1P01008 464 aa15.95■□□□□ 0.14
ACTN1-205ENST00000538545 TXLNAP40222 546 aa15.95■□□□□ 0.14
ACTN1-205ENST00000538545 MRPL12P52815 198 aaKnown RBP15.95■□□□□ 0.14
ACTN1-205ENST00000538545 KANK3Q6NY19 840 aa15.95■□□□□ 0.14
ACTN1-205ENST00000538545 ARHGAP27Q6ZUM4 889 aa15.95■□□□□ 0.14
ACTN1-205ENST00000538545 FBXO11Q86XK2 927 aa15.95■□□□□ 0.14
ACTN1-205ENST00000538545 CREBRFQ8IUR6 639 aa15.95■□□□□ 0.14
ACTN1-205ENST00000538545 TRPM4Q8TD43 1214 aa15.95■□□□□ 0.14
ACTN1-205ENST00000538545 GMCL1Q96IK5 515 aa15.95■□□□□ 0.14
ACTN1-205ENST00000538545 MTMR9Q96QG7 549 aa15.95■□□□□ 0.14
ACTN1-205ENST00000538545 ZNF341Q9BYN7 854 aa15.95■□□□□ 0.14
ACTN1-205ENST00000538545 ARHGEF10LQ9HCE6 1279 aa15.95■□□□□ 0.14
ACTN1-205ENST00000538545 TMX2Q9Y320 296 aa15.95■□□□□ 0.14
ACTN1-205ENST00000538545 MORC2Q9Y6X9 1032 aaPredicted RBP15.95■□□□□ 0.14
ACTN1-205ENST00000538545 STAT2P52630 851 aa15.95■□□□□ 0.14
ACTN1-205ENST00000538545 TNIP1Q15025 636 aa15.95■□□□□ 0.14
ACTN1-205ENST00000538545 ECM1Q16610 540 aa15.95■□□□□ 0.14
ACTN1-205ENST00000538545 HAS1Q92839 578 aa15.95■□□□□ 0.14
ACTN1-205ENST00000538545 ANO3Q9BYT9 981 aa15.95■□□□□ 0.14
ACTN1-205ENST00000538545 DDX25Q9UHL0 483 aaKnown RBP15.95■□□□□ 0.14
ACTN1-205ENST00000538545 CD2APQ9Y5K6 639 aa15.95■□□□□ 0.14
ACTN1-205ENST00000538545 SMTNL1A8MU46 457 aa15.94■□□□□ 0.14
ACTN1-205ENST00000538545 MTMR14Q8NCE2 650 aa15.94■□□□□ 0.14
ACTN1-205ENST00000538545 MRFAP1L1Q96HT8 127 aa15.94■□□□□ 0.14
ACTN1-205ENST00000538545 AMNQ9BXJ7 453 aa15.94■□□□□ 0.14
ACTN1-205ENST00000538545 DEFB129Q9H1M3 183 aa15.94■□□□□ 0.14
ACTN1-205ENST00000538545 CTNND2Q9UQB3 1225 aa15.94■□□□□ 0.14
ACTN1-205ENST00000538545 POLR2AP24928 1970 aaKnown RBP15.94■□□□□ 0.14
ACTN1-205ENST00000538545 PHF20L1A8MW92 1017 aa15.94■□□□□ 0.14
ACTN1-205ENST00000538545 hCG_1984214I3L0E3 225 aa15.94■□□□□ 0.14
ACTN1-205ENST00000538545 IKBKBO14920 756 aa15.94■□□□□ 0.14
ACTN1-205ENST00000538545 STAT3P40763 770 aa15.94■□□□□ 0.14
ACTN1-205ENST00000538545 UBASH3AP57075 661 aa15.94■□□□□ 0.14
ACTN1-205ENST00000538545 KCNK18Q7Z418 384 aa15.94■□□□□ 0.14
ACTN1-205ENST00000538545 FAM83AQ86UY5 434 aa15.94■□□□□ 0.14
ACTN1-205ENST00000538545 ZNF713Q8N859 430 aaPredicted RBP15.94■□□□□ 0.14
ACTN1-205ENST00000538545 FEZ1Q99689 392 aa15.94■□□□□ 0.14
ACTN1-205ENST00000538545 INTS13Q9NVM9 706 aa15.94■□□□□ 0.14
ACTN1-205ENST00000538545 PPP1R3GB7ZBB8 358 aa15.93■□□□□ 0.14
ACTN1-205ENST00000538545 CFBP00751 764 aa15.93■□□□□ 0.14
ACTN1-205ENST00000538545 ZKSCAN4Q969J2 545 aaPredicted RBP15.93■□□□□ 0.14
ACTN1-205ENST00000538545 VPS33BQ9H267 617 aa15.93■□□□□ 0.14
ACTN1-205ENST00000538545 TRIM49BA6NDI0 452 aa15.93■□□□□ 0.14
ACTN1-205ENST00000538545 GOLGA6L6A8MZA4 724 aa15.93■□□□□ 0.14
ACTN1-205ENST00000538545 FZD9O00144 591 aa15.93■□□□□ 0.14
ACTN1-205ENST00000538545 ZNF500O60304 480 aaPredicted RBP15.93■□□□□ 0.14
ACTN1-205ENST00000538545 RPN1P04843 607 aaKnown RBP15.93■□□□□ 0.14
ACTN1-205ENST00000538545 KIF4BQ2VIQ3 1234 aa15.93■□□□□ 0.14
ACTN1-205ENST00000538545 ELOA2Q8IYF1 753 aaPredicted RBP15.93■□□□□ 0.14
ACTN1-205ENST00000538545 LRWD1Q9UFC0 647 aa15.93■□□□□ 0.14
ACTN1-205ENST00000538545 MARCH6O60337 910 aa15.92■□□□□ 0.14
ACTN1-205ENST00000538545 EPS15P42566 896 aa15.92■□□□□ 0.14
ACTN1-205ENST00000538545 ANGEL2Q5VTE6 544 aaKnown RBP15.92■□□□□ 0.14
ACTN1-205ENST00000538545 MLKLQ8NB16 471 aa15.92■□□□□ 0.14
ACTN1-205ENST00000538545 CDK11BP21127 795 aaKnown RBP15.92■□□□□ 0.14
ACTN1-205ENST00000538545 PRPHP41219 470 aa15.92■□□□□ 0.14
ACTN1-205ENST00000538545 ZNF280AP59817 542 aaPredicted RBP15.92■□□□□ 0.14
ACTN1-205ENST00000538545 GRB10Q13322 594 aa15.92■□□□□ 0.14
ACTN1-205ENST00000538545 PRR16Q569H4 304 aa15.92■□□□□ 0.14
ACTN1-205ENST00000538545 IGSF22Q8N9C0 903 aa15.92■□□□□ 0.14
ACTN1-205ENST00000538545 GSDMAQ96QA5 445 aa15.92■□□□□ 0.14
ACTN1-205ENST00000538545 CCSER1Q9C0I3 900 aa15.92■□□□□ 0.14
ACTN1-205ENST00000538545 VCPKMTQ9H867 229 aa15.92■□□□□ 0.14
ACTN1-205ENST00000538545 GTPBP6O43824 516 aaPredicted RBP15.91■□□□□ 0.14
ACTN1-205ENST00000538545 MCM6Q14566 821 aa15.91■□□□□ 0.14
ACTN1-205ENST00000538545 DYMQ7RTS9 669 aa15.91■□□□□ 0.14
ACTN1-205ENST00000538545 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.91■□□□□ 0.14
ACTN1-205ENST00000538545 PNMA5Q96PV4 448 aa15.91■□□□□ 0.14
ACTN1-205ENST00000538545 FHDC1Q9C0D6 1143 aaPredicted RBP15.91■□□□□ 0.14
ACTN1-205ENST00000538545 COL2A1P02458 1487 aaPredicted RBP15.91■□□□□ 0.14
ACTN1-205ENST00000538545 FAM86B1E9PN63 330 aa15.91■□□□□ 0.14
ACTN1-205ENST00000538545 FAM86B2P0C5J1 330 aa15.91■□□□□ 0.14
ACTN1-205ENST00000538545 PMS1P54277 932 aaKnown RBP15.91■□□□□ 0.14
ACTN1-205ENST00000538545 NOLC1Q14978 699 aaKnown RBP eCLIP15.91■□□□□ 0.148e-10■□□□□ 9.7
ACTN1-205ENST00000538545 KMT5BQ4FZB7 885 aa15.91■□□□□ 0.14
ACTN1-205ENST00000538545 PPP4R3BQ5MIZ7 849 aa15.91■□□□□ 0.14
ACTN1-205ENST00000538545 LRRC8AQ8IWT6 810 aa15.91■□□□□ 0.14
ACTN1-205ENST00000538545 CPXCR1Q8N123 301 aa15.91■□□□□ 0.14
ACTN1-205ENST00000538545 GOPCQ9HD26 462 aa15.91■□□□□ 0.14
ACTN1-205ENST00000538545 LAD1O00515 517 aa15.9■□□□□ 0.14
ACTN1-205ENST00000538545 FCER1AP12319 257 aa15.9■□□□□ 0.14
ACTN1-205ENST00000538545 PRCPP42785 496 aa15.9■□□□□ 0.14
ACTN1-205ENST00000538545 TPM4P67936 248 aa15.9■□□□□ 0.14
ACTN1-205ENST00000538545 FKBP1CQ5VVH2 108 aa15.9■□□□□ 0.14
ACTN1-205ENST00000538545 PPP1R18Q6NYC8 613 aa15.9■□□□□ 0.14
ACTN1-205ENST00000538545 KIAA1524Q8TCG1 905 aa15.9■□□□□ 0.14
ACTN1-205ENST00000538545 SNX29Q8TEQ0 813 aa15.9■□□□□ 0.14
ACTN1-205ENST00000538545 AGBL1Q96MI9 1066 aa15.9■□□□□ 0.14
ACTN1-205ENST00000538545 KLRC4O43908 158 aa15.9■□□□□ 0.14
ACTN1-205ENST00000538545 ARHGAP4P98171 946 aa15.9■□□□□ 0.14
ACTN1-205ENST00000538545 HOMER2Q9NSB8 354 aa15.9■□□□□ 0.14
ACTN1-205ENST00000538545 BLOC1S4Q9NUP1 217 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms