RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 CDH23Q9H251 3354 aa10.15□□□□□ -0.79
DDB1-212ENST00000538470 RAD50Q92878 1312 aa10.14□□□□□ -0.79
DDB1-212ENST00000538470 RBM47A0AV96 593 aaKnown RBP10.14□□□□□ -0.79
DDB1-212ENST00000538470 PTPDC1A2A3K4 754 aa10.14□□□□□ -0.79
DDB1-212ENST00000538470 B4DLN1 442 aa10.14□□□□□ -0.79
DDB1-212ENST00000538470 NKRFO15226 690 aaKnown RBP eCLIP10.14□□□□□ -0.79
DDB1-212ENST00000538470 MRPL12P52815 198 aaKnown RBP10.14□□□□□ -0.79
DDB1-212ENST00000538470 DUSP28Q4G0W2 176 aa10.14□□□□□ -0.79
DDB1-212ENST00000538470 ASPRV1Q53RT3 343 aa10.14□□□□□ -0.79
DDB1-212ENST00000538470 CWC27Q6UX04 472 aaKnown RBP10.14□□□□□ -0.79
DDB1-212ENST00000538470 CXCL17Q6UXB2 119 aa10.14□□□□□ -0.79
DDB1-212ENST00000538470 SLC30A10Q6XR72 485 aa10.14□□□□□ -0.79
DDB1-212ENST00000538470 RNF207Q6ZRF8 634 aa10.14□□□□□ -0.79
DDB1-212ENST00000538470 CLEC4DQ8WXI8 215 aa10.14□□□□□ -0.79
DDB1-212ENST00000538470 CNNM2Q9H8M5 875 aa10.14□□□□□ -0.79
DDB1-212ENST00000538470 POLR3EQ9NVU0 708 aa10.14□□□□□ -0.79
DDB1-212ENST00000538470 CTNNA3Q9UI47 895 aa10.14□□□□□ -0.79
DDB1-212ENST00000538470 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.13□□□□□ -0.79
DDB1-212ENST00000538470 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.13□□□□□ -0.79
DDB1-212ENST00000538470 DLL1O00548 723 aa10.13□□□□□ -0.79
DDB1-212ENST00000538470 DYNC1LI2O43237 492 aaPredicted RBP10.13□□□□□ -0.79
DDB1-212ENST00000538470 IGHDP01880 384 aa10.13□□□□□ -0.79
DDB1-212ENST00000538470 EDNRBP24530 442 aa10.13□□□□□ -0.79
DDB1-212ENST00000538470 CPT1AP50416 773 aa10.13□□□□□ -0.79
DDB1-212ENST00000538470 RPS6P62753 249 aaKnown RBP10.13□□□□□ -0.79
DDB1-212ENST00000538470 ITGA7Q13683 1181 aa10.13□□□□□ -0.79
DDB1-212ENST00000538470 IMMTQ16891 758 aaKnown RBP10.13□□□□□ -0.79
DDB1-212ENST00000538470 BRDTQ58F21 947 aaPredicted RBP10.13□□□□□ -0.79
DDB1-212ENST00000538470 RASIP1Q5U651 963 aa10.13□□□□□ -0.79
DDB1-212ENST00000538470 KIAA1211Q6ZU35 1233 aa10.13□□□□□ -0.79
DDB1-212ENST00000538470 EEPD1Q7L9B9 569 aa10.13□□□□□ -0.79
DDB1-212ENST00000538470 PNMA1Q8ND90 353 aa10.13□□□□□ -0.79
DDB1-212ENST00000538470 RGS22Q8NE09 1264 aa10.13□□□□□ -0.79
DDB1-212ENST00000538470 ANKS1AQ92625 1134 aa10.13□□□□□ -0.79
DDB1-212ENST00000538470 FAM161BQ96MY7 647 aa10.13□□□□□ -0.79
DDB1-212ENST00000538470 CDX2Q99626 313 aaPredicted RBP10.13□□□□□ -0.79
DDB1-212ENST00000538470 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.13□□□□□ -0.791e-7■□□□□ 9.3
DDB1-212ENST00000538470 WDR11Q9BZH6 1224 aa10.13□□□□□ -0.79
DDB1-212ENST00000538470 MTIF3Q9H2K0 278 aaKnown RBP10.13□□□□□ -0.79
DDB1-212ENST00000538470 TTYH1Q9H313 450 aaPredicted RBP10.13□□□□□ -0.79
DDB1-212ENST00000538470 SEMA6BQ9H3T3 888 aa10.13□□□□□ -0.79
DDB1-212ENST00000538470 KAT14Q9H8E8 782 aa10.13□□□□□ -0.79
DDB1-212ENST00000538470 PDGFCQ9NRA1 345 aa10.13□□□□□ -0.79
DDB1-212ENST00000538470 MYO9BQ13459 2157 aa10.12□□□□□ -0.79
DDB1-212ENST00000538470 TNKSO95271 1327 aa10.12□□□□□ -0.79
DDB1-212ENST00000538470 ABCB11O95342 1321 aa10.12□□□□□ -0.79
DDB1-212ENST00000538470 UNC80Q8N2C7 3258 aa10.12□□□□□ -0.79
DDB1-212ENST00000538470 KDM4AO75164 1064 aa10.12□□□□□ -0.79
DDB1-212ENST00000538470 CSF2RAP15509 400 aa10.12□□□□□ -0.79
DDB1-212ENST00000538470 DNAJB2P25686 324 aa10.12□□□□□ -0.79
DDB1-212ENST00000538470 CALML3P27482 149 aa10.12□□□□□ -0.79
DDB1-212ENST00000538470 PDE4DQ08499 809 aa10.12□□□□□ -0.79
DDB1-212ENST00000538470 PPP2R5BQ15173 497 aa10.12□□□□□ -0.79
DDB1-212ENST00000538470 CDC37Q16543 378 aaPredicted RBP10.12□□□□□ -0.79
DDB1-212ENST00000538470 TMEM240Q5SV17 173 aa10.12□□□□□ -0.79
DDB1-212ENST00000538470 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.12□□□□□ -0.79
DDB1-212ENST00000538470 MAFAQ8NHW3 353 aaPredicted RBP10.12□□□□□ -0.79
DDB1-212ENST00000538470 EXOC6Q8TAG9 804 aa10.12□□□□□ -0.79
DDB1-212ENST00000538470 SCFD2Q8WU76 684 aa10.12□□□□□ -0.79
DDB1-212ENST00000538470 ZSCAN10Q96SZ4 725 aaPredicted RBP10.12□□□□□ -0.79
DDB1-212ENST00000538470 PPP1R12CQ9BZL4 782 aa10.12□□□□□ -0.79
DDB1-212ENST00000538470 KRT23Q9C075 422 aa10.12□□□□□ -0.79
DDB1-212ENST00000538470 HIPK3Q9H422 1215 aa10.12□□□□□ -0.79
DDB1-212ENST00000538470 IL23AQ9NPF7 189 aa10.12□□□□□ -0.79
DDB1-212ENST00000538470 SCN5AQ14524 2016 aa10.11□□□□□ -0.79
DDB1-212ENST00000538470 B4E1Z4 1266 aa10.11□□□□□ -0.79
DDB1-212ENST00000538470 B4GALT4O60513 344 aa10.11□□□□□ -0.79
DDB1-212ENST00000538470 KPNA6O60684 536 aa10.11□□□□□ -0.79
DDB1-212ENST00000538470 PFKMP08237 780 aa10.11□□□□□ -0.79
DDB1-212ENST00000538470 SUPT20HL2P0C7V6 817 aa10.11□□□□□ -0.79
DDB1-212ENST00000538470 FOSL2P15408 326 aa10.11□□□□□ -0.79
DDB1-212ENST00000538470 PURAQ00577 322 aaKnown RBP10.11□□□□□ -0.79
DDB1-212ENST00000538470 MCF2L2Q86YR7 1114 aa10.11□□□□□ -0.79
DDB1-212ENST00000538470 ENAHQ8N8S7 591 aaPredicted RBP10.11□□□□□ -0.79
DDB1-212ENST00000538470 OR6J1Q8NGC5 347 aa10.11□□□□□ -0.79
DDB1-212ENST00000538470 TIFAQ96CG3 184 aa10.11□□□□□ -0.79
DDB1-212ENST00000538470 PURBQ96QR8 312 aaKnown RBP10.11□□□□□ -0.79
DDB1-212ENST00000538470 ZKSCAN3Q9BRR0 538 aa10.11□□□□□ -0.79
DDB1-212ENST00000538470 UBAC1Q9BSL1 405 aa10.11□□□□□ -0.79
DDB1-212ENST00000538470 NOC4LQ9BVI4 516 aaKnown RBP10.11□□□□□ -0.79
DDB1-212ENST00000538470 DDX49Q9Y6V7 483 aaKnown RBP10.11□□□□□ -0.79
DDB1-212ENST00000538470 GRIN2DO15399 1336 aa10.1□□□□□ -0.79
DDB1-212ENST00000538470 A6NJR5 290 aa10.1□□□□□ -0.79
DDB1-212ENST00000538470 PARP1P09874 1014 aaKnown RBP10.1□□□□□ -0.79
DDB1-212ENST00000538470 GOLGA8HP0CJ92 632 aa10.1□□□□□ -0.79
DDB1-212ENST00000538470 CYP2C18P33260 490 aa10.1□□□□□ -0.79
DDB1-212ENST00000538470 PTPN11Q06124 597 aaPredicted RBP10.1□□□□□ -0.79
DDB1-212ENST00000538470 TTLL4Q14679 1199 aa10.1□□□□□ -0.79
DDB1-212ENST00000538470 RAB30Q15771 203 aa10.1□□□□□ -0.79
DDB1-212ENST00000538470 USH1GQ495M9 461 aa10.1□□□□□ -0.79
DDB1-212ENST00000538470 ZNF365Q70YC5 407 aa10.1□□□□□ -0.79
DDB1-212ENST00000538470 MYLIPQ8WY64 445 aa10.1□□□□□ -0.79
DDB1-212ENST00000538470 HERVK_113Q902F9 699 aa10.1□□□□□ -0.79
DDB1-212ENST00000538470 MTG1Q9BT17 334 aaPredicted RBP10.1□□□□□ -0.79
DDB1-212ENST00000538470 ALDH8A1Q9H2A2 487 aaPredicted RBP10.1□□□□□ -0.79
DDB1-212ENST00000538470 GPHNQ9NQX3 736 aaPredicted RBP10.1□□□□□ -0.79
DDB1-212ENST00000538470 A0A0C4DFX4 3053 aa10.1□□□□□ -0.79
DDB1-212ENST00000538470 MYH7BA7E2Y1 1941 aa10.09□□□□□ -0.79
DDB1-212ENST00000538470 PTGS1P23219 599 aa10.09□□□□□ -0.79
DDB1-212ENST00000538470 PSMC6P62333 389 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms