RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 PCIF1Q9H4Z3 704 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 PTCH1Q13635 1447 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 IGKV5-2P06315 115 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 BSPRYQ5W0U4 402 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 SNRNP48Q6IEG0 339 aaKnown RBP5.9□□□□□ -1.46
LRP6-203ENST00000538239 CASC4Q6P4E1 433 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 APOA5Q6Q788 366 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 USP28Q96RU2 1077 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 BRIP1Q9BX63 1249 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 KIF9Q9HAQ2 790 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 ABCB4P21439 1286 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 SEPT2Q15019 361 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 CEP63Q96MT8 703 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 PSMB7Q99436 277 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 HACL1Q9UJ83 578 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 KCNJ18B7U540 433 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 SH2B2O14492 632 aaPredicted RBP5.9□□□□□ -1.46
LRP6-203ENST00000538239 KCNJ12Q14500 433 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 MCM6Q14566 821 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 PDXDC2PQ6P474 469 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 PPM1KQ8N3J5 372 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 MARCH10Q8NA82 808 aaPredicted RBP5.9□□□□□ -1.46
LRP6-203ENST00000538239 GOLGA5Q8TBA6 731 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 MAP4K1Q92918 833 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 NLRP4Q96MN2 994 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 TRIM31Q9BZY9 425 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 HAUS2Q9NVX0 235 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 LARSQ9P2J5 1176 aaKnown RBP5.9□□□□□ -1.46
LRP6-203ENST00000538239 HESX1Q9UBX0 185 aa5.9□□□□□ -1.46
LRP6-203ENST00000538239 SCAF8Q9UPN6 1271 aaKnown RBP5.9□□□□□ -1.46
LRP6-203ENST00000538239 PNMA6FA0A0J9YX94 578 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 GRIN3BO60391 1043 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 HOXD10P28358 340 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 LACTBP83111 547 aaPredicted RBP5.9□□□□□ -1.47
LRP6-203ENST00000538239 PPP2R5AQ15172 486 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 ZNF827Q17R98 1081 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 SPECC1LQ69YQ0 1117 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 ZNF365Q70YC5 407 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 CCDC26Q8TAB7 109 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 CCT6BQ92526 530 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 HOXC10Q9NYD6 342 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 MROH7-TTC4A0A0A0MT08 1334 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 SPATA31A5Q5VU36 1347 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 SPATA31A7Q8IWB4 1347 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 LONP1P36776 959 aaKnown RBP5.9□□□□□ -1.47
LRP6-203ENST00000538239 PDE6CP51160 858 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 ZNF157P51786 506 aaPredicted RBP5.9□□□□□ -1.47
LRP6-203ENST00000538239 SPP2Q13103 211 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 ADAM9Q13443 819 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 PTPROQ16827 1216 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 DEFB132Q7Z7B7 95 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 TRIM50Q86XT4 487 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 SNX25Q9H3E2 840 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 STAP2Q9UGK3 403 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 CNOT7Q9UIV1 285 aaKnown RBP5.9□□□□□ -1.47
LRP6-203ENST00000538239 DIP2AQ14689 1571 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 IQSEC2Q5JU85 1478 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 CYP2E1P05181 493 aaPredicted RBP5.9□□□□□ -1.47
LRP6-203ENST00000538239 MTX1Q13505 466 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 CTTNQ14247 550 aaKnown RBP5.9□□□□□ -1.47
LRP6-203ENST00000538239 MICALCLQ6ZW33 695 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 GSDMBQ8TAX9 411 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 DCAF4Q8WV16 495 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 CDHR1Q96JP9 859 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 MXD3Q9BW11 206 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 STMN4Q9H169 189 aaPredicted RBP5.9□□□□□ -1.47
LRP6-203ENST00000538239 GPBP1L1Q9HC44 474 aaPredicted RBP5.9□□□□□ -1.47
LRP6-203ENST00000538239 FEM1BQ9UK73 627 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 PCDHB4Q9Y5E5 795 aa5.9□□□□□ -1.47
LRP6-203ENST00000538239 SPDYE16A6NNV3 312 aaPredicted RBP5.89□□□□□ -1.47
LRP6-203ENST00000538239 USP17L10C9JJH3 530 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 NMT2O60551 498 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 PSMC4P43686 418 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 MYL7Q01449 175 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 SPDYE2Q495Y8 402 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 ADALQ6DHV7 355 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 C4orf50Q6ZRC1 276 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 SLC44A5Q8NCS7 719 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 SECISBP2LQ93073 1101 aaKnown RBP5.89□□□□□ -1.47
LRP6-203ENST00000538239 JPH2Q9BR39 696 aaPredicted RBP5.89□□□□□ -1.47
LRP6-203ENST00000538239 MADDQ8WXG6 1647 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 ABCB11O95342 1321 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 XPOTO43592 962 aaKnown RBP5.89□□□□□ -1.47
LRP6-203ENST00000538239 PLEKHA8P1O95397 391 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 LRRC41Q15345 812 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 CFAP157Q5JU67 520 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 NAP1L3Q99457 506 aaPredicted RBP5.89□□□□□ -1.47
LRP6-203ENST00000538239 WDR11Q9BZH6 1224 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 PRDM5Q9NQX1 630 aaPredicted RBP5.89□□□□□ -1.47
LRP6-203ENST00000538239 TECPR2O15040 1411 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 PLEKHG2Q9H7P9 1386 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 CLIC2O15247 247 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 DPEP1P16444 411 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 ITIH3Q06033 890 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 RAET1EQ8TD07 263 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 RNF26Q9BY78 433 aaPredicted RBP5.89□□□□□ -1.47
LRP6-203ENST00000538239 CPVLQ9H3G5 476 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 ZBBXA8MT70 800 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 STK25O00506 426 aa5.89□□□□□ -1.47
LRP6-203ENST00000538239 GBP6Q6ZN66 633 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms