RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 CYBAP13498 195 aa15.15■□□□□ 0.02
CHFR-216ENST00000538235 FDPSP14324 419 aaKnown RBP15.15■□□□□ 0.02
CHFR-216ENST00000538235 IFNAR1P17181 557 aa15.15■□□□□ 0.02
CHFR-216ENST00000538235 HOXD10P28358 340 aa15.15■□□□□ 0.02
CHFR-216ENST00000538235 HOXA13P31271 388 aaPredicted RBP15.15■□□□□ 0.02
CHFR-216ENST00000538235 GNAQP50148 359 aa15.15■□□□□ 0.02
CHFR-216ENST00000538235 HSD17B4P51659 736 aa15.15■□□□□ 0.02
CHFR-216ENST00000538235 SLC9C1Q4G0N8 1177 aa15.15■□□□□ 0.02
CHFR-216ENST00000538235 TMEM63BQ5T3F8 832 aa15.15■□□□□ 0.02
CHFR-216ENST00000538235 SYNE3Q6ZMZ3 975 aa15.15■□□□□ 0.02
CHFR-216ENST00000538235 ANKRD35Q8N283 1001 aa15.15■□□□□ 0.02
CHFR-216ENST00000538235 SLAIN1Q8ND83 568 aa15.15■□□□□ 0.02
CHFR-216ENST00000538235 IL31RAQ8NI17 732 aa15.15■□□□□ 0.02
CHFR-216ENST00000538235 SYTL5Q8TDW5 730 aaPredicted RBP15.15■□□□□ 0.02
CHFR-216ENST00000538235 LENG1Q96BZ8 264 aaPredicted RBP15.15■□□□□ 0.02
CHFR-216ENST00000538235 RRP36Q96EU6 259 aaKnown RBP15.15■□□□□ 0.02
CHFR-216ENST00000538235 LZTS2Q9BRK4 669 aa15.15■□□□□ 0.02
CHFR-216ENST00000538235 CWC22Q9HCG8 908 aaKnown RBP15.15■□□□□ 0.02
CHFR-216ENST00000538235 GJB4Q9NTQ9 266 aa15.15■□□□□ 0.02
CHFR-216ENST00000538235 FBXO40Q9UH90 709 aa15.15■□□□□ 0.02
CHFR-216ENST00000538235 MKI67P46013 3256 aaKnown RBP15.14■□□□□ 0.01
CHFR-216ENST00000538235 POTEFA5A3E0 1075 aa15.14■□□□□ 0.01
CHFR-216ENST00000538235 MEIS2O14770 477 aa15.14■□□□□ 0.01
CHFR-216ENST00000538235 HMGCRP04035 888 aa15.14■□□□□ 0.01
CHFR-216ENST00000538235 PRKAR2AP13861 404 aaKnown RBP15.14■□□□□ 0.01
CHFR-216ENST00000538235 CALML3P27482 149 aa15.14■□□□□ 0.01
CHFR-216ENST00000538235 RABEP1Q15276 862 aa15.14■□□□□ 0.01
CHFR-216ENST00000538235 NPY5RQ15761 445 aa15.14■□□□□ 0.01
CHFR-216ENST00000538235 UBE2SQ16763 222 aa15.14■□□□□ 0.01
CHFR-216ENST00000538235 OLFML2BQ68BL8 750 aa15.14■□□□□ 0.01
CHFR-216ENST00000538235 RNF207Q6ZRF8 634 aa15.14■□□□□ 0.01
CHFR-216ENST00000538235 DPP9Q86TI2 863 aa15.14■□□□□ 0.01
CHFR-216ENST00000538235 NSUN7Q8NE18 718 aaKnown RBP15.14■□□□□ 0.01
CHFR-216ENST00000538235 TAAR1Q96RJ0 339 aa15.14■□□□□ 0.01
CHFR-216ENST00000538235 SLC26A6Q9BXS9 759 aa15.14■□□□□ 0.01
CHFR-216ENST00000538235 PTPDC1A2A3K4 754 aa15.13■□□□□ 0.01
CHFR-216ENST00000538235 POTEB2H3BUK9 544 aa15.13■□□□□ 0.01
CHFR-216ENST00000538235 PRPF3O43395 683 aaKnown RBP15.13■□□□□ 0.01
CHFR-216ENST00000538235 EIF5BO60841 1220 aaKnown RBP15.13■□□□□ 0.01
CHFR-216ENST00000538235 ALDH5A1P51649 535 aaPredicted RBP15.13■□□□□ 0.01
CHFR-216ENST00000538235 PFKFB3Q16875 520 aaPredicted RBP15.13■□□□□ 0.01
CHFR-216ENST00000538235 USP17L6PQ6QN14 398 aa15.13■□□□□ 0.01
CHFR-216ENST00000538235 HEATR3Q7Z4Q2 680 aa15.13■□□□□ 0.01
CHFR-216ENST00000538235 DDX11Q96FC9 970 aa15.13■□□□□ 0.01
CHFR-216ENST00000538235 PFASO15067 1338 aa15.13■□□□□ 0.01
CHFR-216ENST00000538235 CFBP00751 764 aa15.12■□□□□ 0.01
CHFR-216ENST00000538235 ZNF865P0CJ78 1059 aaPredicted RBP15.12■□□□□ 0.01
CHFR-216ENST00000538235 CCL5P13501 91 aa15.12■□□□□ 0.01
CHFR-216ENST00000538235 EDNRBP24530 442 aa15.12■□□□□ 0.01
CHFR-216ENST00000538235 IRX5P78411 483 aaPredicted RBP15.12■□□□□ 0.01
CHFR-216ENST00000538235 ARHGEF6Q15052 776 aa15.12■□□□□ 0.01
CHFR-216ENST00000538235 MAMDC4Q6UXC1 1216 aa15.12■□□□□ 0.01
CHFR-216ENST00000538235 ARMCX2Q7L311 632 aa15.12■□□□□ 0.01
CHFR-216ENST00000538235 CCDC83Q8IWF9 413 aa15.12■□□□□ 0.01
CHFR-216ENST00000538235 MORC4Q8TE76 937 aa15.12■□□□□ 0.01
CHFR-216ENST00000538235 ZFP91Q96JP5 570 aaPredicted RBP15.12■□□□□ 0.01
CHFR-216ENST00000538235 TINF2Q9BSI4 451 aa15.12■□□□□ 0.01
CHFR-216ENST00000538235 RNF26Q9BY78 433 aaPredicted RBP15.12■□□□□ 0.01
CHFR-216ENST00000538235 SLKQ9H2G2 1235 aaPredicted RBP15.12■□□□□ 0.01
CHFR-216ENST00000538235 PAK6Q9NQU5 681 aaPredicted RBP15.12■□□□□ 0.01
CHFR-216ENST00000538235 DIS3Q9Y2L1 958 aaKnown RBP15.12■□□□□ 0.01
CHFR-216ENST00000538235 MRPL11Q9Y3B7 192 aaKnown RBP15.12■□□□□ 0.01
CHFR-216ENST00000538235 FRMPD4Q14CM0 1322 aa15.12■□□□□ 0.01
CHFR-216ENST00000538235 WDR81Q562E7 1941 aa15.11■□□□□ 0.01
CHFR-216ENST00000538235 SCG2P13521 617 aa15.11■□□□□ 0.01
CHFR-216ENST00000538235 SOX10P56693 466 aa15.11■□□□□ 0.01
CHFR-216ENST00000538235 UBXN2AP68543 259 aa15.11■□□□□ 0.01
CHFR-216ENST00000538235 ANO1Q5XXA6 986 aa15.11■□□□□ 0.01
CHFR-216ENST00000538235 RGS22Q8NE09 1264 aa15.11■□□□□ 0.01
CHFR-216ENST00000538235 PGBD1Q96JS3 809 aa15.11■□□□□ 0.01
CHFR-216ENST00000538235 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.11■□□□□ 0.01
CHFR-216ENST00000538235 TMEM260Q9NX78 707 aa15.11■□□□□ 0.01
CHFR-216ENST00000538235 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.11■□□□□ 0.01
CHFR-216ENST00000538235 BARHL2Q9NY43 387 aa15.11■□□□□ 0.01
CHFR-216ENST00000538235 VPS54Q9P1Q0 977 aa15.11■□□□□ 0.01
CHFR-216ENST00000538235 RPTORQ8N122 1335 aa15.11■□□□□ 0.01
CHFR-216ENST00000538235 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.1■□□□□ 0.01
CHFR-216ENST00000538235 EDIL3O43854 480 aa15.1■□□□□ 0.01
CHFR-216ENST00000538235 MNX1P50219 401 aaPredicted RBP15.1■□□□□ 0.01
CHFR-216ENST00000538235 PPP2R5BQ15173 497 aa15.1■□□□□ 0.01
CHFR-216ENST00000538235 ANKRD1Q15327 319 aa15.1■□□□□ 0.01
CHFR-216ENST00000538235 ZNF467Q7Z7K2 595 aaPredicted RBP15.1■□□□□ 0.01
CHFR-216ENST00000538235 FBXO16Q8IX29 292 aaPredicted RBP15.1■□□□□ 0.01
CHFR-216ENST00000538235 RASGRP4Q8TDF6 673 aa15.1■□□□□ 0.01
CHFR-216ENST00000538235 UPF2Q9HAU5 1272 aaKnown RBP15.1■□□□□ 0.01
CHFR-216ENST00000538235 PDGFCQ9NRA1 345 aa15.1■□□□□ 0.01
CHFR-216ENST00000538235 SEC63Q9UGP8 760 aaKnown RBP15.1■□□□□ 0.01
CHFR-216ENST00000538235 LIMCH1Q9UPQ0 1083 aa15.1■□□□□ 0.01
CHFR-216ENST00000538235 SYNGAP1Q96PV0 1343 aa15.1■□□□□ 0.01
CHFR-216ENST00000538235 STK36Q9NRP7 1315 aa15.1■□□□□ 0.01
CHFR-216ENST00000538235 TNRC18O15417 2968 aaPredicted RBP15.09■□□□□ 0.01
CHFR-216ENST00000538235 RGS20O76081 388 aa15.09■□□□□ 0.01
CHFR-216ENST00000538235 EIF2AK2P19525 551 aaKnown RBP15.09■□□□□ 0.01
CHFR-216ENST00000538235 CLK2P49760 499 aaKnown RBP15.09■□□□□ 0.01
CHFR-216ENST00000538235 GJC2Q5T442 439 aaPredicted RBP15.09■□□□□ 0.01
CHFR-216ENST00000538235 LHX8Q68G74 356 aa15.09■□□□□ 0.01
CHFR-216ENST00000538235 EEPD1Q7L9B9 569 aa15.09■□□□□ 0.01
CHFR-216ENST00000538235 TMX3Q96JJ7 454 aa15.09■□□□□ 0.01
CHFR-216ENST00000538235 PXMP2Q9NR77 195 aa15.09■□□□□ 0.01
CHFR-216ENST00000538235 CCDC196A0A1B0GTZ2 297 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms