RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 HOXA13P31271 388 aaPredicted RBP9.74□□□□□ -0.85
UBE3B-208ENST00000538070 ERVK-24P63145 666 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 MRPS25P82663 173 aaKnown RBP9.74□□□□□ -0.85
UBE3B-208ENST00000538070 CDKAL1Q5VV42 579 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 PROM2Q8N271 834 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 CCDC155Q8N6L0 562 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 PLEKHA4Q9H4M7 779 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 ZNHIT6Q9NWK9 470 aaKnown RBP9.74□□□□□ -0.85
UBE3B-208ENST00000538070 PKD2L1Q9P0L9 805 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 PCDHA1Q9Y5I3 950 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 AHDC1Q5TGY3 1603 aaPredicted RBP9.74□□□□□ -0.85
UBE3B-208ENST00000538070 IL1R1P14778 569 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 ZNF76P36508 570 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 MATR3P43243 847 aaKnown RBP eCLIP9.74□□□□□ -0.85
UBE3B-208ENST00000538070 CRKP46108 304 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 CYP4A11Q02928 519 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 SPAG1Q07617 926 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 AOC3Q16853 763 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 ADSSL1Q8N142 457 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 ZMYND12Q9H0C1 365 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 VEZTQ9HBM0 779 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 NLRC4Q9NPP4 1024 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 SH3GLB2Q9NR46 395 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 ABHD10Q9NUJ1 306 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 HDAC6Q9UBN7 1215 aa9.74□□□□□ -0.85
UBE3B-208ENST00000538070 CHMP2AO43633 222 aa9.73□□□□□ -0.85
UBE3B-208ENST00000538070 SRGAP2O75044 1071 aa9.73□□□□□ -0.85
UBE3B-208ENST00000538070 LRP5O75197 1615 aa9.73□□□□□ -0.85
UBE3B-208ENST00000538070 CERKLQ49MI3 558 aaPredicted RBP9.73□□□□□ -0.85
UBE3B-208ENST00000538070 CCDC122Q5T0U0 273 aa9.73□□□□□ -0.85
UBE3B-208ENST00000538070 APTXQ7Z2E3 356 aaKnown RBP9.73□□□□□ -0.85
UBE3B-208ENST00000538070 CAGE1Q8TC20 777 aa9.73□□□□□ -0.85
UBE3B-208ENST00000538070 LZTS2Q9BRK4 669 aa9.73□□□□□ -0.85
UBE3B-208ENST00000538070 PYM1Q9BRP8 204 aaKnown RBP9.73□□□□□ -0.85
UBE3B-208ENST00000538070 TRIM9Q9C026 710 aa9.73□□□□□ -0.85
UBE3B-208ENST00000538070 JMJD4Q9H9V9 463 aa9.73□□□□□ -0.85
UBE3B-208ENST00000538070 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.73□□□□□ -0.85
UBE3B-208ENST00000538070 DDX25Q9UHL0 483 aaKnown RBP9.73□□□□□ -0.85
UBE3B-208ENST00000538070 DDTLA6NHG4 134 aaPredicted RBP9.73□□□□□ -0.85
UBE3B-208ENST00000538070 E9PMD0 336 aa9.73□□□□□ -0.85
UBE3B-208ENST00000538070 H7C1D1 291 aa9.73□□□□□ -0.85
UBE3B-208ENST00000538070 EEF2P13639 858 aaKnown RBP9.73□□□□□ -0.85
UBE3B-208ENST00000538070 AMPD3Q01432 767 aa9.73□□□□□ -0.85
UBE3B-208ENST00000538070 PTPROQ16827 1216 aa9.73□□□□□ -0.85
UBE3B-208ENST00000538070 PRR16Q569H4 304 aa9.73□□□□□ -0.85
UBE3B-208ENST00000538070 KCNK18Q7Z418 384 aa9.73□□□□□ -0.85
UBE3B-208ENST00000538070 CCDC84Q86UT8 332 aaPredicted RBP9.73□□□□□ -0.85
UBE3B-208ENST00000538070 OGFRQ9NZT2 677 aa9.73□□□□□ -0.85
UBE3B-208ENST00000538070 KIAA1024Q9UPX6 916 aa9.73□□□□□ -0.85
UBE3B-208ENST00000538070 ATP6V0A2Q9Y487 856 aa9.73□□□□□ -0.85
UBE3B-208ENST00000538070 CTAGE9A4FU28 777 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 MYMKA6NI61 221 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 TRAF5O00463 557 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 SKIDA1Q1XH10 827 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 CCDC40Q4G0X9 1142 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 SLFN13Q68D06 897 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 NCAPH2Q6IBW4 605 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 KRT26Q7Z3Y9 468 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 SMCR8Q8TEV9 937 aaPredicted RBP9.72□□□□□ -0.85
UBE3B-208ENST00000538070 P2RX5Q93086 422 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 SPZ1Q9BXG8 430 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 COA1Q9GZY4 146 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 PCDHA12Q9UN75 941 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 RAD17O75943 681 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 TDRD12Q587J7 1177 aaKnown RBP9.72□□□□□ -0.85
UBE3B-208ENST00000538070 RBM26Q5T8P6 1007 aaKnown RBP9.72□□□□□ -0.85
UBE3B-208ENST00000538070 CYP26C1Q6V0L0 522 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 SP8Q8IXZ3 490 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 MB21D1Q8N884 522 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 LARP4BQ92615 738 aaKnown RBP9.72□□□□□ -0.85
UBE3B-208ENST00000538070 ZCCHC17Q9NP64 241 aaKnown RBP9.72□□□□□ -0.85
UBE3B-208ENST00000538070 EPN1Q9Y6I3 576 aaPredicted RBP9.72□□□□□ -0.85
UBE3B-208ENST00000538070 PHLPP2Q6ZVD8 1323 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 MYO1BO43795 1136 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 ZMYND10O75800 440 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 ADRA2BP18089 450 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 CRY2Q49AN0 593 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 CCDC174Q6PII3 467 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 MIGA2Q7L4E1 593 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 IRF2BP1Q8IU81 584 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 KRT222Q8N1A0 295 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 OR8K1Q8NGG5 319 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 DDX12PQ92771 950 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 CUL5Q93034 780 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 PANX2Q96RD6 677 aa9.72□□□□□ -0.85
UBE3B-208ENST00000538070 IRS2Q9Y4H2 1338 aa9.71□□□□□ -0.85
UBE3B-208ENST00000538070 GOLGA6L9A6NEM1 432 aa9.71□□□□□ -0.85
UBE3B-208ENST00000538070 SRGNP10124 158 aa9.71□□□□□ -0.85
UBE3B-208ENST00000538070 MRPL12P52815 198 aaKnown RBP9.71□□□□□ -0.85
UBE3B-208ENST00000538070 GYS2P54840 703 aa9.71□□□□□ -0.85
UBE3B-208ENST00000538070 CHMP4BP1P59074 171 aa9.71□□□□□ -0.85
UBE3B-208ENST00000538070 HERC4Q5GLZ8 1057 aaPredicted RBP9.71□□□□□ -0.85
UBE3B-208ENST00000538070 CACNA2D4Q7Z3S7 1137 aa9.71□□□□□ -0.85
UBE3B-208ENST00000538070 RAB34Q9BZG1 259 aa9.71□□□□□ -0.85
UBE3B-208ENST00000538070 JADE2Q9NQC1 790 aa9.71□□□□□ -0.85
UBE3B-208ENST00000538070 DUSP10Q9Y6W6 482 aa9.71□□□□□ -0.85
UBE3B-208ENST00000538070 PDS5AQ29RF7 1337 aaKnown RBP9.71□□□□□ -0.85
UBE3B-208ENST00000538070 POTEB3A0JP26 581 aa9.71□□□□□ -0.85
UBE3B-208ENST00000538070 POTECB2RU33 542 aa9.71□□□□□ -0.85
UBE3B-208ENST00000538070 C21orf2O43822 256 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms