RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 PEX19P40855 299 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 PRPHP41219 470 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 SCTRP47872 440 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 RPS6KA3P51812 740 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 CD302Q8IX05 232 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 IQCKQ8N0W5 287 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 HDAC7Q8WUI4 952 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 P3H4Q92791 437 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 CCDC47Q96A33 483 aaKnown RBP12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 CHP1Q99653 195 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 LRRC1Q9BTT6 524 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 NUCKS1Q9H1E3 243 aaKnown RBP12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 HELLSQ9NRZ9 838 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 TRPC6Q9Y210 931 aa12.61□□□□□ -0.39
SEMA4D-221ENST00000537934 MYH8P13535 1937 aa12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 PES1O00541 588 aaKnown RBP12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 DNAJC8O75937 253 aaPredicted RBP12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 ATP6V1G2O95670 118 aa12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 HMGB2P26583 209 aaKnown RBP12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 KLRK1P26718 216 aa12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 KRT9P35527 623 aa12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 RASGRF1Q13972 1273 aa12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 SLMAPQ14BN4 828 aa12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 CAPRIN2Q6IMN6 1127 aaKnown RBP12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 CRELD2Q6UXH1 353 aaPredicted RBP12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 BZW1Q7L1Q6 419 aaKnown RBP12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 NSMCE1Q8WV22 266 aa12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 NOD2Q9HC29 1040 aa12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 SLC39A2Q9NP94 309 aa12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 IQSEC3Q9UPP2 1182 aaPredicted RBP12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 MYO5AQ9Y4I1 1855 aaKnown RBP12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 POLR2DO15514 142 aaKnown RBP12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 MMP10P09238 476 aa12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 ARID4AP29374 1257 aaPredicted RBP12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 GYG1P46976 350 aa12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 CUL4BQ13620 913 aa12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 GLE1Q53GS7 698 aaKnown RBP12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 MIS18BP1Q6P0N0 1132 aa12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 NLGN1Q8N2Q7 840 aa12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 SPDYE1Q8NFV5 336 aaPredicted RBP12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 CUL5Q93034 780 aa12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 ZBTB10Q96DT7 871 aa12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 SPAG5Q96R06 1193 aa12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 HINFPQ9BQA5 517 aa12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 GPHNQ9NQX3 736 aaPredicted RBP12.6□□□□□ -0.39
SEMA4D-221ENST00000537934 KLF18A0A0U1RQI7 1052 aa12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 LRRC10BA6NIK2 292 aa12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 ZNF233A6NK53 670 aa12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 GOLGA8BA8MQT2 603 aa12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 KRT86O43790 486 aa12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 HERVK_113P62684 666 aa12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 SLC5A9Q2M3M2 681 aa12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 SPRED3Q2MJR0 410 aa12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 A0A0G2JLW4 131 aa12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 TTC36A6NLP5 189 aa12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 HMGB1P1B2RPK0 211 aaPredicted RBP12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 BUB1BO60566 1050 aaPredicted RBP12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 SMNDC1O75940 238 aaKnown RBP eCLIP12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 CDC25AP30304 524 aa12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 KRT83P78385 493 aa12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 GRAPQ13588 217 aa12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 PDCD2Q16342 344 aaPredicted RBP12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 SLC15A2Q16348 729 aa12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 CRY2Q49AN0 593 aa12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 CFAP58Q5T655 872 aa12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 CREG2Q8IUH2 290 aa12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 FLAD1Q8NFF5 587 aa12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 GRAPLQ8TC17 118 aaPredicted RBP12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 RPGRQ92834 1020 aaKnown RBP12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 ZNF512BQ96KM6 892 aaPredicted RBP12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 PDGFDQ9GZP0 370 aaPredicted RBP12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 PIH1D3Q9NQM4 214 aaKnown RBP12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 STIM2Q9P246 746 aa12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 LIMA1Q9UHB6 759 aaKnown RBP12.59□□□□□ -0.39
SEMA4D-221ENST00000537934 GMNCA6NCL1 334 aa12.58□□□□□ -0.4
SEMA4D-221ENST00000537934 OPLAHO14841 1288 aa12.58□□□□□ -0.4
SEMA4D-221ENST00000537934 HSPD1P10809 573 aaKnown RBP12.58□□□□□ -0.4
SEMA4D-221ENST00000537934 GHRP10912 638 aa12.58□□□□□ -0.4
SEMA4D-221ENST00000537934 RAB27AP51159 221 aa12.58□□□□□ -0.4
SEMA4D-221ENST00000537934 STX17P56962 302 aa12.58□□□□□ -0.4
SEMA4D-221ENST00000537934 ELF3P78545 371 aaPredicted RBP12.58□□□□□ -0.4
SEMA4D-221ENST00000537934 KRT40Q6A162 431 aa12.58□□□□□ -0.4
SEMA4D-221ENST00000537934 GRAMD1CQ8IYS0 662 aa12.58□□□□□ -0.4
SEMA4D-221ENST00000537934 ATP6V1G3Q96LB4 118 aa12.58□□□□□ -0.4
SEMA4D-221ENST00000537934 ALG1Q9BT22 464 aa12.58□□□□□ -0.4
SEMA4D-221ENST00000537934 JADE2Q9NQC1 790 aa12.58□□□□□ -0.4
SEMA4D-221ENST00000537934 IRAK4Q9NWZ3 460 aa12.58□□□□□ -0.4
SEMA4D-221ENST00000537934 CORO1CQ9ULV4 474 aaPredicted RBP12.58□□□□□ -0.4
SEMA4D-221ENST00000537934 C15orf41Q9Y2V0 281 aa12.58□□□□□ -0.4
SEMA4D-221ENST00000537934 ERICH2A1L162 156 aa12.58□□□□□ -0.4
SEMA4D-221ENST00000537934 ENO4A6NNW6 628 aa12.58□□□□□ -0.4
SEMA4D-221ENST00000537934 N4BP3O15049 544 aa12.58□□□□□ -0.4
SEMA4D-221ENST00000537934 IDEP14735 1019 aa12.58□□□□□ -0.4
SEMA4D-221ENST00000537934 CD44P16070 742 aaKnown RBP12.58□□□□□ -0.4
SEMA4D-221ENST00000537934 ITGB3BPQ13352 177 aaPredicted RBP12.58□□□□□ -0.4
SEMA4D-221ENST00000537934 SPATA5Q8NB90 893 aa12.58□□□□□ -0.4
SEMA4D-221ENST00000537934 THOC1Q96FV9 657 aaKnown RBP12.58□□□□□ -0.4
SEMA4D-221ENST00000537934 RNF113AO15541 343 aaKnown RBP12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 ACTN4O43707 911 aaKnown RBP12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 UQCRFS1P1P0C7P4 283 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 204.7 ms