RNA–Protein interactions for RNA: ENST00000537796.2

NECAP1-203, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,418 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-203ENST00000537796 PNKPQ96T60 521 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 TUBGCP2Q9BSJ2 902 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 ZHX3Q9H4I2 956 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 PLEKHA4Q9H4M7 779 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 C6orf50Q9HD87 102 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 FAM207AQ9NSI2 230 aaPredicted RBP8.36□□□□□ -1.07
NECAP1-203ENST00000537796 EXOC1Q9NV70 894 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 MACROD2A1Z1Q3 448 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 MARCH6O60337 910 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 GDF11O95390 407 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 TPM1P09493 284 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 ARHGAP25P42331 645 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 DNA2P51530 1060 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 TBC1D8BQ0IIM8 1120 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 TTI2Q6NXR4 508 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 ADGRF4Q8IZF3 695 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 ANKRD13CQ8N6S4 541 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 CTAGE1Q96RT6 745 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 SEMA6BQ9H3T3 888 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 KBTBD4Q9NVX7 518 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 MTMR4Q9NYA4 1195 aa8.36□□□□□ -1.07
NECAP1-203ENST00000537796 PPEF1O14829 653 aaPredicted RBP8.35□□□□□ -1.07
NECAP1-203ENST00000537796 TRIM21P19474 475 aaKnown RBP8.35□□□□□ -1.07
NECAP1-203ENST00000537796 ATP2B4P23634 1241 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 GRB10Q13322 594 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 CALCRLQ16602 461 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 WDR59Q6PJI9 974 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 DNAAF5Q86Y56 855 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 CNGA4Q8IV77 575 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 NELFCDQ8IXH7 590 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 NOA1Q8NC60 698 aaKnown RBP8.35□□□□□ -1.07
NECAP1-203ENST00000537796 CNOT6LQ96LI5 555 aaKnown RBP8.35□□□□□ -1.07
NECAP1-203ENST00000537796 ZC3H12CQ9C0D7 883 aaKnown RBP8.35□□□□□ -1.07
NECAP1-203ENST00000537796 LACRTQ9GZZ8 138 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.35□□□□□ -1.07
NECAP1-203ENST00000537796 LRWD1Q9UFC0 647 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 POLRMTO00411 1230 aaKnown RBP8.35□□□□□ -1.07
NECAP1-203ENST00000537796 PSMA7O14818 248 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 ZNF185O15231 689 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 IL1R1P14778 569 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 HSPA1LP34931 641 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 SPICE1Q8N0Z3 855 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 ANKRD20A12PQ8NF67 263 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 ANKS1AQ92625 1134 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 PNMA5Q96PV4 448 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 CRACR2AQ9BSW2 395 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 JMJD4Q9H9V9 463 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 RMND1Q9NWS8 449 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 SMARCAL1Q9NZC9 954 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 MAGEC2Q9UBF1 373 aaPredicted RBP8.35□□□□□ -1.07
NECAP1-203ENST00000537796 EPN1Q9Y6I3 576 aaPredicted RBP8.35□□□□□ -1.07
NECAP1-203ENST00000537796 CCDC88AQ3V6T2 1871 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 PDS5AQ29RF7 1337 aaKnown RBP8.35□□□□□ -1.07
NECAP1-203ENST00000537796 EFCAB8A8MWE9 144 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 MYO1BO43795 1136 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 CHMP4BP1P59074 171 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 USH1GQ495M9 461 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 CDC42EP5Q6NZY7 148 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 FCHSD1Q86WN1 690 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 GIMAP8Q8ND71 665 aaPredicted RBP8.35□□□□□ -1.07
NECAP1-203ENST00000537796 SNX29Q8TEQ0 813 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 TRERF1Q96PN7 1200 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 NOC4LQ9BVI4 516 aaKnown RBP8.35□□□□□ -1.07
NECAP1-203ENST00000537796 QTRT2Q9H974 415 aaKnown RBP8.35□□□□□ -1.07
NECAP1-203ENST00000537796 SH3GLB2Q9NR46 395 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 BLOC1S4Q9NUP1 217 aa8.35□□□□□ -1.07
NECAP1-203ENST00000537796 LUC7L2Q9Y383 392 aaKnown RBP8.35□□□□□ -1.07
NECAP1-203ENST00000537796 E9PMD0 336 aa8.34□□□□□ -1.07
NECAP1-203ENST00000537796 MEIS1O00470 390 aa8.34□□□□□ -1.07
NECAP1-203ENST00000537796 NDUFA10O95299 355 aa8.34□□□□□ -1.07
NECAP1-203ENST00000537796 HERVK_113P62684 666 aa8.34□□□□□ -1.07
NECAP1-203ENST00000537796 CRY2Q49AN0 593 aa8.34□□□□□ -1.07
NECAP1-203ENST00000537796 TMED8Q6PL24 325 aaPredicted RBP8.34□□□□□ -1.07
NECAP1-203ENST00000537796 CDK5RAP3Q96JB5 506 aa8.34□□□□□ -1.07
NECAP1-203ENST00000537796 SPZ1Q9BXG8 430 aa8.34□□□□□ -1.07
NECAP1-203ENST00000537796 MMRN2Q9H8L6 949 aa8.34□□□□□ -1.07
NECAP1-203ENST00000537796 LRRC10BA6NIK2 292 aa8.34□□□□□ -1.07
NECAP1-203ENST00000537796 LGALS16A8MUM7 142 aa8.34□□□□□ -1.07
NECAP1-203ENST00000537796 H7C1D1 291 aa8.34□□□□□ -1.07
NECAP1-203ENST00000537796 TBC1D8O95759 1140 aa8.34□□□□□ -1.07
NECAP1-203ENST00000537796 ATP1A1P05023 1023 aaKnown RBP8.34□□□□□ -1.07
NECAP1-203ENST00000537796 SHMT1P34896 483 aa8.34□□□□□ -1.07
NECAP1-203ENST00000537796 ADCY7P51828 1080 aa8.34□□□□□ -1.07
NECAP1-203ENST00000537796 PTPROQ16827 1216 aa8.34□□□□□ -1.07
NECAP1-203ENST00000537796 CC2D1AQ6P1N0 951 aaPredicted RBP8.34□□□□□ -1.07
NECAP1-203ENST00000537796 KRT25Q7Z3Z0 450 aa8.34□□□□□ -1.07
NECAP1-203ENST00000537796 GSPT2Q8IYD1 628 aaKnown RBP8.34□□□□□ -1.07
NECAP1-203ENST00000537796 P2RX5Q93086 422 aa8.34□□□□□ -1.07
NECAP1-203ENST00000537796 CCSER1Q9C0I3 900 aa8.34□□□□□ -1.07
NECAP1-203ENST00000537796 SBF2Q86WG5 1849 aa8.34□□□□□ -1.07
NECAP1-203ENST00000537796 DDTLA6NHG4 134 aaPredicted RBP8.33□□□□□ -1.08
NECAP1-203ENST00000537796 N4BP1O75113 896 aaKnown RBP8.33□□□□□ -1.08
NECAP1-203ENST00000537796 PHACTR2O75167 634 aa8.33□□□□□ -1.08
NECAP1-203ENST00000537796 RHOBTB3O94955 611 aa8.33□□□□□ -1.08
NECAP1-203ENST00000537796 GNA11P29992 359 aa8.33□□□□□ -1.08
NECAP1-203ENST00000537796 ARID5AQ03989 594 aa8.33□□□□□ -1.08
NECAP1-203ENST00000537796 IKQ13123 557 aaPredicted RBP8.33□□□□□ -1.08
NECAP1-203ENST00000537796 CCDC122Q5T0U0 273 aa8.33□□□□□ -1.08
NECAP1-203ENST00000537796 CYP26C1Q6V0L0 522 aa8.33□□□□□ -1.08
NECAP1-203ENST00000537796 TMC4Q7Z404 712 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms