RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 SNHG28P0DPA3 235 aa11.36□□□□□ -0.59
CHD4-207ENST00000537634 CSF2RAP15509 400 aa11.36□□□□□ -0.59
CHD4-207ENST00000537634 PTGS1P23219 599 aa11.36□□□□□ -0.59
CHD4-207ENST00000537634 ITGA7Q13683 1181 aa11.36□□□□□ -0.59
CHD4-207ENST00000537634 DUSP28Q4G0W2 176 aa11.36□□□□□ -0.59
CHD4-207ENST00000537634 CCDC178Q5BJE1 867 aa11.36□□□□□ -0.59
CHD4-207ENST00000537634 PSRC1Q6PGN9 363 aaPredicted RBP11.36□□□□□ -0.59
CHD4-207ENST00000537634 SLC30A10Q6XR72 485 aa11.36□□□□□ -0.59
CHD4-207ENST00000537634 RNF207Q6ZRF8 634 aa11.36□□□□□ -0.59
CHD4-207ENST00000537634 IQCA1Q86XH1 822 aa11.36□□□□□ -0.59
CHD4-207ENST00000537634 DGKHQ86XP1 1220 aa11.36□□□□□ -0.59
CHD4-207ENST00000537634 EXOC6Q8TAG9 804 aa11.36□□□□□ -0.59
CHD4-207ENST00000537634 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.36□□□□□ -0.59
CHD4-207ENST00000537634 ZKSCAN3Q9BRR0 538 aa11.36□□□□□ -0.59
CHD4-207ENST00000537634 SEZ6LQ9BYH1 1024 aa11.36□□□□□ -0.59
CHD4-207ENST00000537634 TTYH1Q9H313 450 aaPredicted RBP11.36□□□□□ -0.59
CHD4-207ENST00000537634 KDM4AO75164 1064 aa11.35□□□□□ -0.59
CHD4-207ENST00000537634 CD4P01730 458 aa11.35□□□□□ -0.59
CHD4-207ENST00000537634 FOSL2P15408 326 aa11.35□□□□□ -0.59
CHD4-207ENST00000537634 DNAJB2P25686 324 aa11.35□□□□□ -0.59
CHD4-207ENST00000537634 CYP2C18P33260 490 aa11.35□□□□□ -0.59
CHD4-207ENST00000537634 PDE4DQ08499 809 aa11.35□□□□□ -0.59
CHD4-207ENST00000537634 USH1GQ495M9 461 aa11.35□□□□□ -0.59
CHD4-207ENST00000537634 TMEM240Q5SV17 173 aa11.35□□□□□ -0.59
CHD4-207ENST00000537634 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.35□□□□□ -0.59
CHD4-207ENST00000537634 SLC43A3Q8NBI5 491 aa11.35□□□□□ -0.59
CHD4-207ENST00000537634 PNMA1Q8ND90 353 aa11.35□□□□□ -0.59
CHD4-207ENST00000537634 MAFAQ8NHW3 353 aaPredicted RBP11.35□□□□□ -0.59
CHD4-207ENST00000537634 CLEC4DQ8WXI8 215 aa11.35□□□□□ -0.59
CHD4-207ENST00000537634 MYLIPQ8WY64 445 aa11.35□□□□□ -0.59
CHD4-207ENST00000537634 WDR11Q9BZH6 1224 aa11.35□□□□□ -0.59
CHD4-207ENST00000537634 HIPK3Q9H422 1215 aa11.35□□□□□ -0.59
CHD4-207ENST00000537634 KAT14Q9H8E8 782 aa11.35□□□□□ -0.59
CHD4-207ENST00000537634 POLR3EQ9NVU0 708 aa11.35□□□□□ -0.59
CHD4-207ENST00000537634 COL6A3P12111 3177 aa11.35□□□□□ -0.59
CHD4-207ENST00000537634 RAD50Q92878 1312 aa11.35□□□□□ -0.59
CHD4-207ENST00000537634 B4DLN1 442 aa11.34□□□□□ -0.59
CHD4-207ENST00000537634 B4E1Z4 1266 aa11.34□□□□□ -0.59
CHD4-207ENST00000537634 GOLGA8HP0CJ92 632 aa11.34□□□□□ -0.59
CHD4-207ENST00000537634 ACRP10323 421 aa11.34□□□□□ -0.59
CHD4-207ENST00000537634 CPT1AP50416 773 aa11.34□□□□□ -0.59
CHD4-207ENST00000537634 MRPL12P52815 198 aaKnown RBP11.34□□□□□ -0.59
CHD4-207ENST00000537634 PSMC6P62333 389 aa11.34□□□□□ -0.59
CHD4-207ENST00000537634 RPS6P62753 249 aaKnown RBP11.34□□□□□ -0.59
CHD4-207ENST00000537634 PPP2R5BQ15173 497 aa11.34□□□□□ -0.59
CHD4-207ENST00000537634 IMMTQ16891 758 aaKnown RBP11.34□□□□□ -0.59
CHD4-207ENST00000537634 BRDTQ58F21 947 aaPredicted RBP11.34□□□□□ -0.59
CHD4-207ENST00000537634 TMEM63BQ5T3F8 832 aa11.34□□□□□ -0.59
CHD4-207ENST00000537634 ZNF365Q70YC5 407 aa11.34□□□□□ -0.59
CHD4-207ENST00000537634 DNERQ8NFT8 737 aa11.34□□□□□ -0.59
CHD4-207ENST00000537634 OR6J1Q8NGC5 347 aa11.34□□□□□ -0.59
CHD4-207ENST00000537634 DSCC1Q9BVC3 393 aa11.34□□□□□ -0.59
CHD4-207ENST00000537634 MTIF3Q9H2K0 278 aaKnown RBP11.34□□□□□ -0.59
CHD4-207ENST00000537634 IL23AQ9NPF7 189 aa11.34□□□□□ -0.59
CHD4-207ENST00000537634 CTNNA3Q9UI47 895 aa11.34□□□□□ -0.59
CHD4-207ENST00000537634 MYH6P13533 1939 aa11.34□□□□□ -0.59
CHD4-207ENST00000537634 GRIN2DO15399 1336 aa11.34□□□□□ -0.59
CHD4-207ENST00000537634 RBM47A0AV96 593 aaKnown RBP11.33□□□□□ -0.6
CHD4-207ENST00000537634 NKRFO15226 690 aaKnown RBP eCLIP11.33□□□□□ -0.6
CHD4-207ENST00000537634 DHX16O60231 1041 aaKnown RBP11.33□□□□□ -0.6
CHD4-207ENST00000537634 B4GALT4O60513 344 aa11.33□□□□□ -0.6
CHD4-207ENST00000537634 MYL3P08590 195 aa11.33□□□□□ -0.6
CHD4-207ENST00000537634 CDC37Q16543 378 aaPredicted RBP11.33□□□□□ -0.6
CHD4-207ENST00000537634 ASPRV1Q53RT3 343 aa11.33□□□□□ -0.6
CHD4-207ENST00000537634 C16orf59Q7L2K0 433 aa11.33□□□□□ -0.6
CHD4-207ENST00000537634 SCFD2Q8WU76 684 aa11.33□□□□□ -0.6
CHD4-207ENST00000537634 TIFAQ96CG3 184 aa11.33□□□□□ -0.6
CHD4-207ENST00000537634 ZSCAN10Q96SZ4 725 aaPredicted RBP11.33□□□□□ -0.6
CHD4-207ENST00000537634 UBAC1Q9BSL1 405 aa11.33□□□□□ -0.6
CHD4-207ENST00000537634 KRT23Q9C075 422 aa11.33□□□□□ -0.6
CHD4-207ENST00000537634 UBA5Q9GZZ9 404 aa11.33□□□□□ -0.6
CHD4-207ENST00000537634 TRPV6Q9H1D0 765 aa11.33□□□□□ -0.6
CHD4-207ENST00000537634 CPVLQ9H3G5 476 aa11.33□□□□□ -0.6
CHD4-207ENST00000537634 GPHNQ9NQX3 736 aaPredicted RBP11.33□□□□□ -0.6
CHD4-207ENST00000537634 TNKSO95271 1327 aa11.33□□□□□ -0.6
CHD4-207ENST00000537634 ABCB11O95342 1321 aa11.33□□□□□ -0.6
CHD4-207ENST00000537634 UMODL1Q5DID0 1318 aa11.33□□□□□ -0.6
CHD4-207ENST00000537634 PARP1P09874 1014 aaKnown RBP11.32□□□□□ -0.6
CHD4-207ENST00000537634 EDNRBP24530 442 aa11.32□□□□□ -0.6
CHD4-207ENST00000537634 CCL23P55773 120 aa11.32□□□□□ -0.6
CHD4-207ENST00000537634 PURAQ00577 322 aaKnown RBP11.32□□□□□ -0.6
CHD4-207ENST00000537634 RASIP1Q5U651 963 aa11.32□□□□□ -0.6
CHD4-207ENST00000537634 ENAHQ8N8S7 591 aaPredicted RBP11.32□□□□□ -0.6
CHD4-207ENST00000537634 ANKS1AQ92625 1134 aa11.32□□□□□ -0.6
CHD4-207ENST00000537634 MTG1Q9BT17 334 aaPredicted RBP11.32□□□□□ -0.6
CHD4-207ENST00000537634 NOC4LQ9BVI4 516 aaKnown RBP11.32□□□□□ -0.6
CHD4-207ENST00000537634 ALDH8A1Q9H2A2 487 aaPredicted RBP11.32□□□□□ -0.6
CHD4-207ENST00000537634 ZNF576Q9H609 170 aa11.32□□□□□ -0.6
CHD4-207ENST00000537634 CNNM2Q9H8M5 875 aa11.32□□□□□ -0.6
CHD4-207ENST00000537634 ZSWIM5Q9P217 1185 aa11.32□□□□□ -0.6
CHD4-207ENST00000537634 SCN10AQ9Y5Y9 1956 aa11.31□□□□□ -0.6
CHD4-207ENST00000537634 FGBP02675 491 aa11.31□□□□□ -0.6
CHD4-207ENST00000537634 SUPT20HL2P0C7V6 817 aa11.31□□□□□ -0.6
CHD4-207ENST00000537634 TXNP10599 105 aaKnown RBP11.31□□□□□ -0.6
CHD4-207ENST00000537634 TTLL4Q14679 1199 aa11.31□□□□□ -0.6
CHD4-207ENST00000537634 GRIN2CQ14957 1233 aa11.31□□□□□ -0.6
CHD4-207ENST00000537634 RAB30Q15771 203 aa11.31□□□□□ -0.6
CHD4-207ENST00000537634 FAM47CQ5HY64 1035 aa11.31□□□□□ -0.6
CHD4-207ENST00000537634 MCF2L2Q86YR7 1114 aa11.31□□□□□ -0.6
CHD4-207ENST00000537634 ADGRF4Q8IZF3 695 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms