RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 RAD21O60216 631 aa17.59■□□□□ 0.41
MKS1-204ENST00000537529 COBLO75128 1261 aa17.59■□□□□ 0.41
MKS1-204ENST00000537529 TPM1P09493 284 aa17.59■□□□□ 0.41
MKS1-204ENST00000537529 GCFC2P16383 781 aaKnown RBP17.59■□□□□ 0.41
MKS1-204ENST00000537529 PPP1R2P41236 205 aa17.59■□□□□ 0.41
MKS1-204ENST00000537529 ASIC1P78348 528 aa17.59■□□□□ 0.41
MKS1-204ENST00000537529 GRIPAP1Q4V328 841 aa17.59■□□□□ 0.41
MKS1-204ENST00000537529 CDK5RAP3Q96JB5 506 aa17.59■□□□□ 0.41
MKS1-204ENST00000537529 CCT6AP40227 531 aaKnown RBP17.59■□□□□ 0.41
MKS1-204ENST00000537529 PDIA5Q14554 519 aa17.59■□□□□ 0.41
MKS1-204ENST00000537529 SEPT2Q15019 361 aa17.59■□□□□ 0.41
MKS1-204ENST00000537529 EZH2Q15910 746 aaKnown RBP17.59■□□□□ 0.41
MKS1-204ENST00000537529 ABCB5Q2M3G0 1257 aa17.59■□□□□ 0.41
MKS1-204ENST00000537529 ZNF710Q8N1W2 664 aa17.59■□□□□ 0.41
MKS1-204ENST00000537529 NOC3LQ8WTT2 800 aaKnown RBP17.59■□□□□ 0.41
MKS1-204ENST00000537529 DHTKD1Q96HY7 919 aaPredicted RBP17.59■□□□□ 0.41
MKS1-204ENST00000537529 NAA15Q9BXJ9 866 aaKnown RBP17.59■□□□□ 0.41
MKS1-204ENST00000537529 TDRD3Q9H7E2 651 aaKnown RBP17.59■□□□□ 0.41
MKS1-204ENST00000537529 PPP2R2CQ9Y2T4 447 aa17.59■□□□□ 0.41
MKS1-204ENST00000537529 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.59■□□□□ 0.414e-6■■■□□ 15.3
MKS1-204ENST00000537529 QRICH1Q2TAL8 776 aa17.58■□□□□ 0.4
MKS1-204ENST00000537529 CCDC51Q96ER9 411 aa17.58■□□□□ 0.4
MKS1-204ENST00000537529 CAMKK2Q96RR4 588 aa17.58■□□□□ 0.4
MKS1-204ENST00000537529 THAP9Q9H5L6 903 aa17.58■□□□□ 0.4
MKS1-204ENST00000537529 TAB2Q9NYJ8 693 aa17.58■□□□□ 0.4
MKS1-204ENST00000537529 PDE4DQ08499 809 aa17.57■□□□□ 0.4
MKS1-204ENST00000537529 RBL2Q08999 1139 aa17.57■□□□□ 0.4
MKS1-204ENST00000537529 GRB10Q13322 594 aa17.57■□□□□ 0.4
MKS1-204ENST00000537529 TRIM14Q14142 442 aa17.57■□□□□ 0.4
MKS1-204ENST00000537529 CDC37Q16543 378 aaPredicted RBP17.57■□□□□ 0.4
MKS1-204ENST00000537529 SYT10Q6XYQ8 523 aa17.57■□□□□ 0.4
MKS1-204ENST00000537529 SV2BQ7L1I2 683 aa17.57■□□□□ 0.4
MKS1-204ENST00000537529 CNGA4Q8IV77 575 aa17.57■□□□□ 0.4
MKS1-204ENST00000537529 REXO1L1PQ8IX06 675 aa17.57■□□□□ 0.4
MKS1-204ENST00000537529 GMCL1P1Q8NEA9 526 aa17.57■□□□□ 0.4
MKS1-204ENST00000537529 TRIM47Q96LD4 638 aa17.57■□□□□ 0.4
MKS1-204ENST00000537529 DDX25Q9UHL0 483 aaKnown RBP17.57■□□□□ 0.4
MKS1-204ENST00000537529 PHLPP2Q6ZVD8 1323 aa17.57■□□□□ 0.4
MKS1-204ENST00000537529 BICDL2A1A5D9 508 aa17.57■□□□□ 0.4
MKS1-204ENST00000537529 EDIL3O43854 480 aa17.57■□□□□ 0.4
MKS1-204ENST00000537529 MFAP3LO75121 409 aa17.57■□□□□ 0.4
MKS1-204ENST00000537529 EEF1GP26641 437 aaKnown RBP17.57■□□□□ 0.4
MKS1-204ENST00000537529 ETF1P62495 437 aaKnown RBP17.57■□□□□ 0.4
MKS1-204ENST00000537529 EN1Q05925 392 aaPredicted RBP17.57■□□□□ 0.4
MKS1-204ENST00000537529 SHROOM1Q2M3G4 852 aaPredicted RBP17.57■□□□□ 0.4
MKS1-204ENST00000537529 VPS16Q9H269 839 aa17.57■□□□□ 0.4
MKS1-204ENST00000537529 TMOD2Q9NZR1 351 aa17.57■□□□□ 0.4
MKS1-204ENST00000537529 ATF5Q9Y2D1 282 aaPredicted RBP17.57■□□□□ 0.4
MKS1-204ENST00000537529 YDJCA8MPS7 323 aa17.56■□□□□ 0.4
MKS1-204ENST00000537529 C21orf2O43822 256 aa17.56■□□□□ 0.4
MKS1-204ENST00000537529 GDF11O95390 407 aa17.56■□□□□ 0.4
MKS1-204ENST00000537529 KRT79Q5XKE5 535 aa17.56■□□□□ 0.4
MKS1-204ENST00000537529 CNNM4Q6P4Q7 775 aa17.56■□□□□ 0.4
MKS1-204ENST00000537529 GMCL1Q96IK5 515 aa17.56■□□□□ 0.4
MKS1-204ENST00000537529 MAGEC2Q9UBF1 373 aaPredicted RBP17.56■□□□□ 0.4
MKS1-204ENST00000537529 PCDHA1Q9Y5I3 950 aa17.56■□□□□ 0.4
MKS1-204ENST00000537529 TRIM49BA6NDI0 452 aa17.56■□□□□ 0.4
MKS1-204ENST00000537529 CCDC93Q567U6 631 aa17.56■□□□□ 0.4
MKS1-204ENST00000537529 RBM26Q5T8P6 1007 aaKnown RBP17.56■□□□□ 0.4
MKS1-204ENST00000537529 MCTP2Q6DN12 878 aa17.56■□□□□ 0.4
MKS1-204ENST00000537529 SNX29Q8TEQ0 813 aa17.56■□□□□ 0.4
MKS1-204ENST00000537529 ANKRD7Q92527 254 aa17.56■□□□□ 0.4
MKS1-204ENST00000537529 PNMA5Q96PV4 448 aa17.56■□□□□ 0.4
MKS1-204ENST00000537529 LRRC27Q9C0I9 530 aa17.56■□□□□ 0.4
MKS1-204ENST00000537529 MARCH6O60337 910 aa17.55■□□□□ 0.4
MKS1-204ENST00000537529 COBLL1Q53SF7 1204 aa17.55■□□□□ 0.4
MKS1-204ENST00000537529 TTI2Q6NXR4 508 aa17.55■□□□□ 0.4
MKS1-204ENST00000537529 SIAH1Q8IUQ4 282 aa17.55■□□□□ 0.4
MKS1-204ENST00000537529 LARP4BQ92615 738 aaKnown RBP17.55■□□□□ 0.4
MKS1-204ENST00000537529 P2RX5Q93086 422 aa17.55■□□□□ 0.4
MKS1-204ENST00000537529 POTEMA6NI47 508 aa17.54■□□□□ 0.4
MKS1-204ENST00000537529 F5H6K3 240 aa17.54■□□□□ 0.4
MKS1-204ENST00000537529 GYPCP04921 128 aa17.54■□□□□ 0.4
MKS1-204ENST00000537529 CCNE1P24864 410 aa17.54■□□□□ 0.4
MKS1-204ENST00000537529 HOXA7P31268 230 aaPredicted RBP17.54■□□□□ 0.4
MKS1-204ENST00000537529 PMS1P54277 932 aaKnown RBP17.54■□□□□ 0.4
MKS1-204ENST00000537529 KLRC3Q07444 240 aa17.54■□□□□ 0.4
MKS1-204ENST00000537529 NCBP1Q09161 790 aaKnown RBP17.54■□□□□ 0.4
MKS1-204ENST00000537529 TMEM119Q4V9L6 283 aa17.54■□□□□ 0.4
MKS1-204ENST00000537529 TOGARAM2Q6ZUX3 1019 aa17.54■□□□□ 0.4
MKS1-204ENST00000537529 CREBRFQ8IUR6 639 aa17.54■□□□□ 0.4
MKS1-204ENST00000537529 RTKN2Q8IZC4 609 aa17.54■□□□□ 0.4
MKS1-204ENST00000537529 CPLX3Q8WVH0 158 aa17.54■□□□□ 0.4
MKS1-204ENST00000537529 PRMT6Q96LA8 375 aaPredicted RBP17.54■□□□□ 0.4
MKS1-204ENST00000537529 CSRNP1Q96S65 589 aa17.54■□□□□ 0.4
MKS1-204ENST00000537529 BLOC1S4Q9NUP1 217 aa17.54■□□□□ 0.4
MKS1-204ENST00000537529 SYNPO2Q9UMS6 1093 aa17.54■□□□□ 0.4
MKS1-204ENST00000537529 PVALEFA0A1B0GWK0 134 aa17.54■□□□□ 0.4
MKS1-204ENST00000537529 SLU7O95391 586 aaKnown RBP17.54■□□□□ 0.4
MKS1-204ENST00000537529 NDUFB10O96000 172 aa17.54■□□□□ 0.4
MKS1-204ENST00000537529 CASP14P31944 242 aa17.54■□□□□ 0.4
MKS1-204ENST00000537529 AP3B2Q13367 1082 aa17.54■□□□□ 0.4
MKS1-204ENST00000537529 RSBN1LQ6PCB5 846 aaPredicted RBP17.54■□□□□ 0.4
MKS1-204ENST00000537529 IRF2BP1Q8IU81 584 aa17.54■□□□□ 0.4
MKS1-204ENST00000537529 FAM114A1Q8IWE2 563 aa17.54■□□□□ 0.4
MKS1-204ENST00000537529 TTLL6Q8N841 843 aa17.54■□□□□ 0.4
MKS1-204ENST00000537529 RAD54LQ92698 747 aa17.54■□□□□ 0.4
MKS1-204ENST00000537529 ERO1AQ96HE7 468 aa17.54■□□□□ 0.4
MKS1-204ENST00000537529 AMNQ9BXJ7 453 aa17.54■□□□□ 0.4
MKS1-204ENST00000537529 SRRTQ9BXP5 876 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms