RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 DENND2CQ68D51 928 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 EP400NLQ6ZTU2 488 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 NLRP14Q86W24 1093 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 FAXDC2Q96IV6 333 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 ATP6V1G3Q96LB4 118 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 SLC40A1Q9NP59 571 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 SPATA31A6Q5VVP1 1343 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 RASSF10A6NK89 507 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 E7EWF7 191 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 CREB3O43889 395 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 EEF1GP26641 437 aaKnown RBP5.92□□□□□ -1.46
PTPRD-213ENST00000537002 NR1I3Q14994 352 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 UAP1Q16222 522 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-213ENST00000537002 GNPTABQ3T906 1256 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 XAGE3Q8WTP9 111 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 DDX12PQ92771 950 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 LRRC27Q9C0I9 530 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 CNNM2Q9H8M5 875 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 EPB41L5Q9HCM4 733 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 CD248Q9HCU0 757 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 SAMSN1Q9NSI8 373 aaKnown RBP5.92□□□□□ -1.46
PTPRD-213ENST00000537002 PCDHA5Q9Y5H7 936 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 EPN1Q9Y6I3 576 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-213ENST00000537002 STXBP3O00186 592 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 KCNK3O14649 394 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 RTN2O75298 545 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 GCLCP48506 637 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-213ENST00000537002 KLHL23Q8NBE8 558 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 DRAXINQ8NBI3 349 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-213ENST00000537002 ANKIB1Q9P2G1 1089 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 HPSEQ9Y251 543 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 NRKQ7Z2Y5 1582 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 MYBL2P10244 700 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 RCAN1P53805 252 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 COG7P83436 770 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 ADCY1Q08828 1119 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 SLC5A9Q2M3M2 681 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 TNNI3KQ59H18 835 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 AGBL2Q5U5Z8 902 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 CCT8L2Q96SF2 557 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 HAUS2Q9NVX0 235 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 FPGT-TNNI3KV9GXZ4 949 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 GMNCA6NCL1 334 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 HNRNPCL1O60812 293 aaKnown RBP5.92□□□□□ -1.46
PTPRD-213ENST00000537002 SLC5A1P13866 664 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 PSMD7P51665 324 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 AMPD2Q01433 879 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 CUL3Q13618 768 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 PTGISQ16647 500 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 HHATQ5VTY9 493 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 CCDC174Q6PII3 467 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 KAT2BQ92831 832 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 ABCC6O95255 1503 aa5.92□□□□□ -1.46
PTPRD-213ENST00000537002 TSPY2A6NKD2 308 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 EVI5O60447 810 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 LMNAP02545 664 aaKnown RBP5.91□□□□□ -1.46
PTPRD-213ENST00000537002 POLD1P28340 1107 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 IGHMBP2P38935 993 aaKnown RBP5.91□□□□□ -1.46
PTPRD-213ENST00000537002 MDH1P40925 334 aaKnown RBP5.91□□□□□ -1.46
PTPRD-213ENST00000537002 ITIH4Q14624 930 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 SALL1Q9NSC2 1324 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 MGRN1O60291 552 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 PPFIA2O75334 1257 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 TBCAO75347 108 aaKnown RBP5.91□□□□□ -1.46
PTPRD-213ENST00000537002 SLC9C1Q4G0N8 1177 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 RESP18Q5W5W9 173 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 CENPTQ96BT3 561 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 RMDN2Q96LZ7 410 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 NOVA2Q9UNW9 492 aaKnown RBP5.91□□□□□ -1.46
PTPRD-213ENST00000537002 BAG2O95816 211 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 EEF2P13639 858 aaKnown RBP5.91□□□□□ -1.46
PTPRD-213ENST00000537002 CXCR5P32302 372 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 AMOTQ4VCS5 1084 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 DCAF17Q5H9S7 520 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-213ENST00000537002 CCDC62Q6P9F0 684 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 SMYD4Q8IYR2 804 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-213ENST00000537002 MYCBPAPQ8TBZ2 947 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 KLHL29Q96CT2 875 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 NLRC4Q9NPP4 1024 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 C15orf41Q9Y2V0 281 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 LRRIQ3A6PVS8 624 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-213ENST00000537002 KRIT1O00522 736 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 RTN3O95197 1032 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-213ENST00000537002 MOCS3O95396 460 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 RASSF2P50749 326 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 RPS6KA3P51812 740 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 NAIF1Q69YI7 327 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-213ENST00000537002 TTLL7Q6ZT98 887 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 ZNF483Q8TF39 744 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-213ENST00000537002 THOC1Q96FV9 657 aaKnown RBP5.91□□□□□ -1.46
PTPRD-213ENST00000537002 FAM192AQ9GZU8 254 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 MIS12Q9H081 205 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 MTUS1Q9ULD2 1270 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 ATP6V0A2Q9Y487 856 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 TAF5LO75529 589 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 PAEPP09466 180 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 COPB1P53618 953 aaKnown RBP5.91□□□□□ -1.46
PTPRD-213ENST00000537002 TMCO4Q5TGY1 634 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 PHLDB2Q86SQ0 1253 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 SMC1BQ8NDV3 1235 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms