RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 NOL9Q5SY16 702 aaKnown RBP8.57□□□□□ -1.04
YBX3-206ENST00000536823 OTUD7BQ6GQQ9 843 aa8.57□□□□□ -1.04
YBX3-206ENST00000536823 NAA16Q6N069 864 aaPredicted RBP8.57□□□□□ -1.04
YBX3-206ENST00000536823 MIGA2Q7L4E1 593 aa8.57□□□□□ -1.04
YBX3-206ENST00000536823 CTU1Q7Z7A3 348 aaKnown RBP8.57□□□□□ -1.04
YBX3-206ENST00000536823 ZSCAN29Q8IWY8 852 aaPredicted RBP8.57□□□□□ -1.04
YBX3-206ENST00000536823 RHPN1Q8TCX5 695 aa8.57□□□□□ -1.04
YBX3-206ENST00000536823 ZNF296Q8WUU4 475 aaPredicted RBP8.57□□□□□ -1.04
YBX3-206ENST00000536823 BRI3BPQ8WY22 251 aa8.57□□□□□ -1.04
YBX3-206ENST00000536823 ZKSCAN4Q969J2 545 aaPredicted RBP8.57□□□□□ -1.04
YBX3-206ENST00000536823 PBXIP1Q96AQ6 731 aa8.57□□□□□ -1.04
YBX3-206ENST00000536823 KIF1BPQ96EK5 621 aa8.57□□□□□ -1.04
YBX3-206ENST00000536823 R3HDMLQ9H3Y0 253 aa8.57□□□□□ -1.04
YBX3-206ENST00000536823 IL1RAPL2Q9NP60 686 aa8.57□□□□□ -1.04
YBX3-206ENST00000536823 PIH1D3Q9NQM4 214 aaKnown RBP8.57□□□□□ -1.04
YBX3-206ENST00000536823 TFIP11Q9UBB9 837 aaKnown RBP8.57□□□□□ -1.04
YBX3-206ENST00000536823 RNF114Q9Y508 228 aa8.57□□□□□ -1.04
YBX3-206ENST00000536823 MAFBQ9Y5Q3 323 aaPredicted RBP8.57□□□□□ -1.04
YBX3-206ENST00000536823 PDE4DIPQ5VU43 2346 aa8.57□□□□□ -1.04
YBX3-206ENST00000536823 CDK5RAP2Q96SN8 1893 aa8.56□□□□□ -1.04
YBX3-206ENST00000536823 KIAA0100Q14667 2235 aaKnown RBP8.56□□□□□ -1.04
YBX3-206ENST00000536823 CCL15-CCL14A0A0B4J2E2 113 aa8.56□□□□□ -1.04
YBX3-206ENST00000536823 DDTLA6NHG4 134 aaPredicted RBP8.56□□□□□ -1.04
YBX3-206ENST00000536823 FKTNO75072 461 aa8.56□□□□□ -1.04
YBX3-206ENST00000536823 RAB11FIP3O75154 756 aa8.56□□□□□ -1.04
YBX3-206ENST00000536823 PPATQ06203 517 aa8.56□□□□□ -1.04
YBX3-206ENST00000536823 SNAPC2Q13487 334 aa8.56□□□□□ -1.04
YBX3-206ENST00000536823 PICALMQ13492 652 aa8.56□□□□□ -1.04
YBX3-206ENST00000536823 CCL15Q16663 113 aa8.56□□□□□ -1.04
YBX3-206ENST00000536823 TEX11Q8IYF3 940 aa8.56□□□□□ -1.04
YBX3-206ENST00000536823 CLASRPQ8N2M8 674 aaKnown RBP8.56□□□□□ -1.04
YBX3-206ENST00000536823 PTPN18Q99952 460 aa8.56□□□□□ -1.04
YBX3-206ENST00000536823 NOL10Q9BSC4 688 aaKnown RBP8.56□□□□□ -1.04
YBX3-206ENST00000536823 FOCADQ5VW36 1801 aa8.56□□□□□ -1.04
YBX3-206ENST00000536823 CENPFP49454 3210 aa8.56□□□□□ -1.04
YBX3-206ENST00000536823 DOCK1Q14185 1865 aa8.55□□□□□ -1.04
YBX3-206ENST00000536823 BAG3O95817 575 aa8.55□□□□□ -1.04
YBX3-206ENST00000536823 CETPP11597 493 aa8.55□□□□□ -1.04
YBX3-206ENST00000536823 TAL1P17542 331 aaPredicted RBP8.55□□□□□ -1.04
YBX3-206ENST00000536823 TBC1D8BQ0IIM8 1120 aa8.55□□□□□ -1.04
YBX3-206ENST00000536823 CRHR2Q13324 411 aa8.55□□□□□ -1.04
YBX3-206ENST00000536823 TMED8Q6PL24 325 aaPredicted RBP8.55□□□□□ -1.04
YBX3-206ENST00000536823 SH3RF3Q8TEJ3 882 aaPredicted RBP8.55□□□□□ -1.04
YBX3-206ENST00000536823 NUDT8Q8WV74 236 aa8.55□□□□□ -1.04
YBX3-206ENST00000536823 WFDC12Q8WWY7 111 aa8.55□□□□□ -1.04
YBX3-206ENST00000536823 KRTAP4-9Q9BYQ8 210 aa8.55□□□□□ -1.04
YBX3-206ENST00000536823 OSBPL5Q9H0X9 879 aaPredicted RBP8.55□□□□□ -1.04
YBX3-206ENST00000536823 ZCCHC17Q9NP64 241 aaKnown RBP8.55□□□□□ -1.04
YBX3-206ENST00000536823 KCNH4Q9UQ05 1017 aa8.55□□□□□ -1.04
YBX3-206ENST00000536823 SIPA1L1O43166 1804 aa8.54□□□□□ -1.04
YBX3-206ENST00000536823 PTPRFP10586 1907 aa8.54□□□□□ -1.04
YBX3-206ENST00000536823 BTBD19C9JJ37 291 aa8.54□□□□□ -1.04
YBX3-206ENST00000536823 PIK3CDO00329 1044 aa8.54□□□□□ -1.04
YBX3-206ENST00000536823 IDH1O75874 414 aaKnown RBP8.54□□□□□ -1.04
YBX3-206ENST00000536823 IFIT2P09913 472 aaKnown RBP8.54□□□□□ -1.04
YBX3-206ENST00000536823 CYP7A1P22680 504 aa8.54□□□□□ -1.04
YBX3-206ENST00000536823 RRP1P56182 461 aaKnown RBP8.54□□□□□ -1.04
YBX3-206ENST00000536823 TAF1CQ15572 869 aaPredicted RBP8.54□□□□□ -1.04
YBX3-206ENST00000536823 PKN2Q16513 984 aaKnown RBP8.54□□□□□ -1.04
YBX3-206ENST00000536823 PRR23CQ6ZRP0 262 aa8.54□□□□□ -1.04
YBX3-206ENST00000536823 ADGRA1Q86SQ6 560 aa8.54□□□□□ -1.04
YBX3-206ENST00000536823 CERS3Q8IU89 383 aa8.54□□□□□ -1.04
YBX3-206ENST00000536823 PLEKHM2Q8IWE5 1019 aa8.54□□□□□ -1.04
YBX3-206ENST00000536823 SCYL3Q8IZE3 742 aa8.54□□□□□ -1.04
YBX3-206ENST00000536823 FAM43AQ8N2R8 423 aa8.54□□□□□ -1.04
YBX3-206ENST00000536823 ZDHHC1Q8WTX9 485 aa8.54□□□□□ -1.04
YBX3-206ENST00000536823 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.54□□□□□ -1.04
YBX3-206ENST00000536823 UBE2OQ9C0C9 1292 aaKnown RBP8.54□□□□□ -1.04
YBX3-206ENST00000536823 AATFQ9NY61 560 aaKnown RBP eCLIP8.54□□□□□ -1.04
YBX3-206ENST00000536823 FLT1P17948 1338 aa8.54□□□□□ -1.04
YBX3-206ENST00000536823 PHIPQ8WWQ0 1821 aa8.53□□□□□ -1.04
YBX3-206ENST00000536823 CCDC85CA6NKD9 419 aa8.53□□□□□ -1.04
YBX3-206ENST00000536823 EML1O00423 815 aa8.53□□□□□ -1.04
YBX3-206ENST00000536823 CTNND1O60716 968 aaKnown RBP8.53□□□□□ -1.04
YBX3-206ENST00000536823 MAP3K12Q12852 859 aa8.53□□□□□ -1.04
YBX3-206ENST00000536823 TTF1Q15361 905 aaPredicted RBP8.53□□□□□ -1.04
YBX3-206ENST00000536823 DMRTC2Q8IXT2 367 aaPredicted RBP8.53□□□□□ -1.04
YBX3-206ENST00000536823 ERO1AQ96HE7 468 aa8.53□□□□□ -1.04
YBX3-206ENST00000536823 ANTXR1Q9H6X2 564 aa8.53□□□□□ -1.04
YBX3-206ENST00000536823 ZFYVE28Q9HCC9 887 aa8.53□□□□□ -1.04
YBX3-206ENST00000536823 PICK1Q9NRD5 415 aa8.53□□□□□ -1.04
YBX3-206ENST00000536823 HERC5Q9UII4 1024 aaKnown RBP8.53□□□□□ -1.04
YBX3-206ENST00000536823 GPC6Q9Y625 555 aaPredicted RBP8.53□□□□□ -1.04
YBX3-206ENST00000536823 DDX60LQ5H9U9 1706 aaKnown RBP8.52□□□□□ -1.05
YBX3-206ENST00000536823 FAM196BA6NMK8 535 aa8.52□□□□□ -1.05
YBX3-206ENST00000536823 CXCL11O14625 94 aa8.52□□□□□ -1.05
YBX3-206ENST00000536823 LZTS3O60299 673 aaPredicted RBP8.52□□□□□ -1.05
YBX3-206ENST00000536823 PDE6AP16499 860 aa8.52□□□□□ -1.05
YBX3-206ENST00000536823 PTPRAP18433 802 aa8.52□□□□□ -1.05
YBX3-206ENST00000536823 NOS3P29474 1203 aa8.52□□□□□ -1.05
YBX3-206ENST00000536823 CD97P48960 835 aa8.52□□□□□ -1.05
YBX3-206ENST00000536823 AFF1P51825 1210 aaKnown RBP8.52□□□□□ -1.05
YBX3-206ENST00000536823 DYNLL1P63167 89 aaKnown RBP8.52□□□□□ -1.05
YBX3-206ENST00000536823 SP3Q02447 781 aa8.52□□□□□ -1.05
YBX3-206ENST00000536823 MOGSQ13724 837 aa8.52□□□□□ -1.05
YBX3-206ENST00000536823 FBXO46Q6PJ61 603 aaPredicted RBP8.52□□□□□ -1.05
YBX3-206ENST00000536823 OTOP1Q7RTM1 612 aa8.52□□□□□ -1.05
YBX3-206ENST00000536823 ANKRD23Q86SG2 305 aa8.52□□□□□ -1.05
YBX3-206ENST00000536823 MAPKAPK5Q8IW41 473 aa8.52□□□□□ -1.05
YBX3-206ENST00000536823 MAGEB6Q8N7X4 407 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms