RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 CCDC93Q567U6 631 aa9□□□□□ -0.97
CCDC60-203ENST00000536742 C2CD4AQ8NCU7 369 aaPredicted RBP9□□□□□ -0.97
CCDC60-203ENST00000536742 JDP2Q8WYK2 163 aa9□□□□□ -0.97
CCDC60-203ENST00000536742 DPF3Q92784 378 aa9□□□□□ -0.97
CCDC60-203ENST00000536742 BRIP1Q9BX63 1249 aa9□□□□□ -0.97
CCDC60-203ENST00000536742 GLIS2Q9BZE0 524 aaPredicted RBP9□□□□□ -0.97
CCDC60-203ENST00000536742 ADARB2Q9NS39 739 aaKnown RBP9□□□□□ -0.97
CCDC60-203ENST00000536742 MTMR10Q9NXD2 777 aa9□□□□□ -0.97
CCDC60-203ENST00000536742 PGAP2Q9UHJ9 254 aa9□□□□□ -0.97
CCDC60-203ENST00000536742 AP4E1Q9UPM8 1137 aa9□□□□□ -0.97
CCDC60-203ENST00000536742 PCDHGB7Q9Y5F8 929 aa9□□□□□ -0.97
CCDC60-203ENST00000536742 KTN1Q86UP2 1357 aaKnown RBP8.99□□□□□ -0.97
CCDC60-203ENST00000536742 FKTNO75072 461 aa8.99□□□□□ -0.97
CCDC60-203ENST00000536742 TBC1D8O95759 1140 aa8.99□□□□□ -0.97
CCDC60-203ENST00000536742 PREPP48147 710 aa8.99□□□□□ -0.97
CCDC60-203ENST00000536742 GJA8P48165 433 aa8.99□□□□□ -0.97
CCDC60-203ENST00000536742 FAM160A1Q05DH4 1040 aa8.99□□□□□ -0.97
CCDC60-203ENST00000536742 RING1Q06587 406 aa8.99□□□□□ -0.97
CCDC60-203ENST00000536742 MAP3K12Q12852 859 aa8.99□□□□□ -0.97
CCDC60-203ENST00000536742 CYFIP1Q7L576 1253 aa8.99□□□□□ -0.97
CCDC60-203ENST00000536742 C2orf69Q8N8R5 385 aa8.99□□□□□ -0.97
CCDC60-203ENST00000536742 KCT2Q8NC54 265 aa8.99□□□□□ -0.97
CCDC60-203ENST00000536742 RNF214Q8ND24 703 aa8.99□□□□□ -0.97
CCDC60-203ENST00000536742 MYRFLQ96LU7 910 aa8.99□□□□□ -0.97
CCDC60-203ENST00000536742 ZNF277Q9NRM2 450 aaPredicted RBP8.99□□□□□ -0.97
CCDC60-203ENST00000536742 PPP1R9AQ9ULJ8 1098 aa8.99□□□□□ -0.97
CCDC60-203ENST00000536742 SPTBN5Q9NRC6 3674 aaKnown RBP8.99□□□□□ -0.97
CCDC60-203ENST00000536742 MYH14Q7Z406 1995 aaKnown RBP8.99□□□□□ -0.97
CCDC60-203ENST00000536742 RGPD2P0DJD1 1756 aa8.99□□□□□ -0.97
CCDC60-203ENST00000536742 BRCA2P51587 3418 aa8.98□□□□□ -0.97
CCDC60-203ENST00000536742 TMEM265A0A087WTH1 108 aa8.98□□□□□ -0.97
CCDC60-203ENST00000536742 F6X3S4 739 aa8.98□□□□□ -0.97
CCDC60-203ENST00000536742 IGLV1-40P01703 118 aa8.98□□□□□ -0.97
CCDC60-203ENST00000536742 IARSP41252 1262 aaKnown RBP8.98□□□□□ -0.97
CCDC60-203ENST00000536742 PTPN11Q06124 597 aaPredicted RBP8.98□□□□□ -0.97
CCDC60-203ENST00000536742 PDE4BQ07343 736 aa8.98□□□□□ -0.97
CCDC60-203ENST00000536742 WIPI1Q5MNZ9 446 aaPredicted RBP8.98□□□□□ -0.97
CCDC60-203ENST00000536742 NBPF6Q5VWK0 638 aa8.98□□□□□ -0.97
CCDC60-203ENST00000536742 STYK1Q6J9G0 422 aa8.98□□□□□ -0.97
CCDC60-203ENST00000536742 BNC2Q6ZN30 1099 aaPredicted RBP8.98□□□□□ -0.97
CCDC60-203ENST00000536742 ARMC10Q8N2F6 343 aa8.98□□□□□ -0.97
CCDC60-203ENST00000536742 RASGRP4Q8TDF6 673 aa8.98□□□□□ -0.97
CCDC60-203ENST00000536742 JARID2Q92833 1246 aaPredicted RBP8.98□□□□□ -0.97
CCDC60-203ENST00000536742 ARMC5Q96C12 935 aa8.98□□□□□ -0.97
CCDC60-203ENST00000536742 NBPF4Q96M43 638 aa8.98□□□□□ -0.97
CCDC60-203ENST00000536742 FANCD2OSQ96PS1 177 aa8.98□□□□□ -0.97
CCDC60-203ENST00000536742 PCMTD2Q9NV79 361 aa8.98□□□□□ -0.97
CCDC60-203ENST00000536742 SLX4Q8IY92 1834 aa8.97□□□□□ -0.97
CCDC60-203ENST00000536742 GFRA2O00451 464 aa8.97□□□□□ -0.97
CCDC60-203ENST00000536742 ASPAP45381 313 aa8.97□□□□□ -0.97
CCDC60-203ENST00000536742 CRKLP46109 303 aaKnown RBP8.97□□□□□ -0.97
CCDC60-203ENST00000536742 USP11P51784 963 aa8.97□□□□□ -0.97
CCDC60-203ENST00000536742 APOBRQ0VD83 1088 aa8.97□□□□□ -0.97
CCDC60-203ENST00000536742 LRFN4Q6PJG9 635 aa8.97□□□□□ -0.97
CCDC60-203ENST00000536742 DYMQ7RTS9 669 aa8.97□□□□□ -0.97
CCDC60-203ENST00000536742 REC114Q7Z4M0 266 aa8.97□□□□□ -0.97
CCDC60-203ENST00000536742 SLITRK4Q8IW52 837 aa8.97□□□□□ -0.97
CCDC60-203ENST00000536742 RTKN2Q8IZC4 609 aa8.97□□□□□ -0.97
CCDC60-203ENST00000536742 PLPPR2Q96GM1 343 aa8.97□□□□□ -0.97
CCDC60-203ENST00000536742 PIDD1Q9HB75 910 aa8.97□□□□□ -0.97
CCDC60-203ENST00000536742 DISC1Q9NRI5 854 aa8.97□□□□□ -0.97
CCDC60-203ENST00000536742 NR2E3Q9Y5X4 410 aa8.97□□□□□ -0.97
CCDC60-203ENST00000536742 BCORQ6W2J9 1755 aa8.96□□□□□ -0.97
CCDC60-203ENST00000536742 DRD2P14416 443 aa8.96□□□□□ -0.98
CCDC60-203ENST00000536742 HOXC9P31274 260 aa8.96□□□□□ -0.98
CCDC60-203ENST00000536742 Q7L0L9 218 aa8.96□□□□□ -0.98
CCDC60-203ENST00000536742 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.96□□□□□ -0.98
CCDC60-203ENST00000536742 REXO1Q8N1G1 1221 aaKnown RBP8.96□□□□□ -0.98
CCDC60-203ENST00000536742 EZH1Q92800 747 aaPredicted RBP8.96□□□□□ -0.98
CCDC60-203ENST00000536742 GPRASP2Q96D09 838 aa8.96□□□□□ -0.98
CCDC60-203ENST00000536742 KCNF1Q9H3M0 494 aa8.96□□□□□ -0.98
CCDC60-203ENST00000536742 GBA2Q9HCG7 927 aaPredicted RBP8.96□□□□□ -0.98
CCDC60-203ENST00000536742 PICK1Q9NRD5 415 aa8.96□□□□□ -0.98
CCDC60-203ENST00000536742 INPP5FQ9Y2H2 1132 aa8.96□□□□□ -0.98
CCDC60-203ENST00000536742 TRIM17Q9Y577 477 aa8.96□□□□□ -0.98
CCDC60-203ENST00000536742 ACTL7BQ9Y614 415 aa8.96□□□□□ -0.98
CCDC60-203ENST00000536742 CARMIL3Q8ND23 1372 aa8.96□□□□□ -0.98
CCDC60-203ENST00000536742 ARFGEF2Q9Y6D5 1785 aa8.96□□□□□ -0.98
CCDC60-203ENST00000536742 SSTR4P31391 388 aa8.95□□□□□ -0.98
CCDC60-203ENST00000536742 AMPHP49418 695 aa8.95□□□□□ -0.98
CCDC60-203ENST00000536742 PAK2Q13177 524 aa8.95□□□□□ -0.98
CCDC60-203ENST00000536742 MAP7Q14244 749 aa8.95□□□□□ -0.98
CCDC60-203ENST00000536742 INPP5AQ14642 412 aa8.95□□□□□ -0.98
CCDC60-203ENST00000536742 ZBTB37Q5TC79 503 aa8.95□□□□□ -0.98
CCDC60-203ENST00000536742 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.95□□□□□ -0.98
CCDC60-203ENST00000536742 VPS37DQ86XT2 251 aa8.95□□□□□ -0.98
CCDC60-203ENST00000536742 FAM20CQ8IXL6 584 aa8.95□□□□□ -0.98
CCDC60-203ENST00000536742 SLC43A3Q8NBI5 491 aa8.95□□□□□ -0.98
CCDC60-203ENST00000536742 NKD1Q969G9 470 aa8.95□□□□□ -0.98
CCDC60-203ENST00000536742 MASTLQ96GX5 879 aa8.95□□□□□ -0.98
CCDC60-203ENST00000536742 EAF1Q96JC9 268 aaPredicted RBP8.95□□□□□ -0.98
CCDC60-203ENST00000536742 WNT10AQ9GZT5 417 aa8.95□□□□□ -0.98
CCDC60-203ENST00000536742 ACSS3Q9H6R3 686 aa8.95□□□□□ -0.98
CCDC60-203ENST00000536742 ADAM30Q9UKF2 790 aa8.95□□□□□ -0.98
CCDC60-203ENST00000536742 RPTORQ8N122 1335 aa8.95□□□□□ -0.98
CCDC60-203ENST00000536742 CENPJQ9HC77 1338 aaPredicted RBP8.95□□□□□ -0.98
CCDC60-203ENST00000536742 DCDC2CA8MYV0 355 aa8.94□□□□□ -0.98
CCDC60-203ENST00000536742 BMP3P12645 472 aa8.94□□□□□ -0.98
CCDC60-203ENST00000536742 ZNF165P49910 485 aa8.94□□□□□ -0.98
CCDC60-203ENST00000536742 NFIAQ12857 509 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms