RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 CPA1P15085 419 aa20.89■□□□□ 0.93
CCDC61-201ENST00000536603 C1orf53Q5VUE5 145 aa20.89■□□□□ 0.93
CCDC61-201ENST00000536603 TINF2Q9BSI4 451 aa20.89■□□□□ 0.93
CCDC61-201ENST00000536603 A1CFQ9NQ94 594 aaKnown RBP20.89■□□□□ 0.93
CCDC61-201ENST00000536603 PNMA2Q9UL42 364 aa20.89■□□□□ 0.93
CCDC61-201ENST00000536603 PHF24Q9UPV7 400 aa20.89■□□□□ 0.93
CCDC61-201ENST00000536603 CNPY2Q9Y2B0 182 aa20.89■□□□□ 0.93
CCDC61-201ENST00000536603 SLC12A7Q9Y666 1083 aa20.89■□□□□ 0.93
CCDC61-201ENST00000536603 CLTBP09497 229 aa20.88■□□□□ 0.93
CCDC61-201ENST00000536603 SMAD3P84022 425 aaKnown RBP20.88■□□□□ 0.93
CCDC61-201ENST00000536603 QRICH1Q2TAL8 776 aa20.88■□□□□ 0.93
CCDC61-201ENST00000536603 USH1GQ495M9 461 aa20.88■□□□□ 0.93
CCDC61-201ENST00000536603 MAFAQ8NHW3 353 aaPredicted RBP20.88■□□□□ 0.93
CCDC61-201ENST00000536603 CTCFLQ8NI51 663 aaPredicted RBP20.88■□□□□ 0.93
CCDC61-201ENST00000536603 PQBP1O60828 265 aaKnown RBP20.87■□□□□ 0.93
CCDC61-201ENST00000536603 RAG1P15918 1043 aa20.87■□□□□ 0.93
CCDC61-201ENST00000536603 RXRAP19793 462 aa20.87■□□□□ 0.93
CCDC61-201ENST00000536603 PSMA5P28066 241 aa20.87■□□□□ 0.93
CCDC61-201ENST00000536603 BLOC1S2Q6QNY1 142 aa20.87■□□□□ 0.93
CCDC61-201ENST00000536603 NSMFQ6X4W1 530 aa20.87■□□□□ 0.93
CCDC61-201ENST00000536603 SGMS1Q86VZ5 419 aa20.87■□□□□ 0.93
CCDC61-201ENST00000536603 RAB11FIP4Q86YS3 637 aa20.87■□□□□ 0.93
CCDC61-201ENST00000536603 RNPC3Q96LT9 517 aaKnown RBP20.87■□□□□ 0.93
CCDC61-201ENST00000536603 MAP3K14Q99558 947 aa20.87■□□□□ 0.93
CCDC61-201ENST00000536603 NFIBO00712 420 aa20.86■□□□□ 0.93
CCDC61-201ENST00000536603 SEC24BO95487 1268 aa20.86■□□□□ 0.93
CCDC61-201ENST00000536603 AKR1A1P14550 325 aa20.86■□□□□ 0.93
CCDC61-201ENST00000536603 KIF5BP33176 963 aa20.86■□□□□ 0.93
CCDC61-201ENST00000536603 FGD1P98174 961 aa20.86■□□□□ 0.93
CCDC61-201ENST00000536603 CNTN2Q02246 1040 aa20.86■□□□□ 0.93
CCDC61-201ENST00000536603 SLC35G1Q2M3R5 365 aa20.86■□□□□ 0.93
CCDC61-201ENST00000536603 CCDC144CPQ8IYA2 1237 aa20.86■□□□□ 0.93
CCDC61-201ENST00000536603 CLEC4DQ8WXI8 215 aa20.86■□□□□ 0.93
CCDC61-201ENST00000536603 MYLIPQ8WY64 445 aa20.86■□□□□ 0.93
CCDC61-201ENST00000536603 RIOX1Q9H6W3 641 aa20.86■□□□□ 0.93
CCDC61-201ENST00000536603 A0A1W2PQ45 241 aaPredicted RBP20.85■□□□□ 0.93
CCDC61-201ENST00000536603 A0A1W2PQY0 241 aa20.85■□□□□ 0.93
CCDC61-201ENST00000536603 CYTH3O43739 400 aa20.85■□□□□ 0.93
CCDC61-201ENST00000536603 CALM1P0DP23 149 aa20.85■□□□□ 0.93
CCDC61-201ENST00000536603 CALM2P0DP24 149 aa20.85■□□□□ 0.93
CCDC61-201ENST00000536603 CALM3P0DP25 149 aa20.85■□□□□ 0.93
CCDC61-201ENST00000536603 SYNE3Q6ZMZ3 975 aa20.85■□□□□ 0.93
CCDC61-201ENST00000536603 FBXO11Q86XK2 927 aa20.85■□□□□ 0.93
CCDC61-201ENST00000536603 HOMER1Q86YM7 354 aa20.85■□□□□ 0.93
CCDC61-201ENST00000536603 MTMR8Q96EF0 704 aa20.85■□□□□ 0.93
CCDC61-201ENST00000536603 TMEM39AQ9NV64 488 aa20.85■□□□□ 0.93
CCDC61-201ENST00000536603 CYP39A1Q9NYL5 469 aa20.85■□□□□ 0.93
CCDC61-201ENST00000536603 LAMA2P24043 3122 aaKnown RBP20.84■□□□□ 0.93
CCDC61-201ENST00000536603 PTPDC1A2A3K4 754 aa20.84■□□□□ 0.93
CCDC61-201ENST00000536603 ZBTB5O15062 677 aa20.84■□□□□ 0.93
CCDC61-201ENST00000536603 FOSL2P15408 326 aa20.84■□□□□ 0.93
CCDC61-201ENST00000536603 CASTP20810 708 aaKnown RBP20.84■□□□□ 0.93
CCDC61-201ENST00000536603 RPS6KB1P23443 525 aa20.84■□□□□ 0.93
CCDC61-201ENST00000536603 FPGSQ05932 587 aa20.84■□□□□ 0.93
CCDC61-201ENST00000536603 Q6ZUG5 572 aa20.84■□□□□ 0.93
CCDC61-201ENST00000536603 MICU3Q86XE3 530 aa20.84■□□□□ 0.93
CCDC61-201ENST00000536603 FAM133AQ8N9E0 248 aa20.84■□□□□ 0.93
CCDC61-201ENST00000536603 LENG1Q96BZ8 264 aaPredicted RBP20.84■□□□□ 0.93
CCDC61-201ENST00000536603 FGD4Q96M96 766 aa20.84■□□□□ 0.93
CCDC61-201ENST00000536603 PIGSQ96S52 555 aa20.84■□□□□ 0.93
CCDC61-201ENST00000536603 BRPF3Q9ULD4 1205 aa20.84■□□□□ 0.93
CCDC61-201ENST00000536603 BAZ2BQ9UIF8 2168 aaKnown RBP20.83■□□□□ 0.93
CCDC61-201ENST00000536603 ABCB11O95342 1321 aa20.83■□□□□ 0.93
CCDC61-201ENST00000536603 UNC80Q8N2C7 3258 aa20.83■□□□□ 0.93
CCDC61-201ENST00000536603 SOWAHBA6NEL2 793 aa20.83■□□□□ 0.93
CCDC61-201ENST00000536603 DCDC2CA8MYV0 355 aa20.83■□□□□ 0.93
CCDC61-201ENST00000536603 ZNF865P0CJ78 1059 aaPredicted RBP20.83■□□□□ 0.93
CCDC61-201ENST00000536603 ITGB8P26012 769 aa20.83■□□□□ 0.93
CCDC61-201ENST00000536603 BAATQ14032 418 aaPredicted RBP20.83■□□□□ 0.93
CCDC61-201ENST00000536603 APOA5Q6Q788 366 aa20.83■□□□□ 0.93
CCDC61-201ENST00000536603 MAMDC4Q6UXC1 1216 aa20.83■□□□□ 0.93
CCDC61-201ENST00000536603 ZNF467Q7Z7K2 595 aaPredicted RBP20.83■□□□□ 0.93
CCDC61-201ENST00000536603 MSL3Q8N5Y2 521 aaKnown RBP20.83■□□□□ 0.93
CCDC61-201ENST00000536603 FANCBQ8NB91 859 aa20.83■□□□□ 0.93
CCDC61-201ENST00000536603 PURBQ96QR8 312 aaKnown RBP20.83■□□□□ 0.93
CCDC61-201ENST00000536603 LZTS2Q9BRK4 669 aa20.83■□□□□ 0.93
CCDC61-201ENST00000536603 AMNQ9BXJ7 453 aa20.83■□□□□ 0.93
CCDC61-201ENST00000536603 TTYH1Q9H313 450 aaPredicted RBP20.83■□□□□ 0.93
CCDC61-201ENST00000536603 STARD7Q9NQZ5 370 aa20.83■□□□□ 0.93
CCDC61-201ENST00000536603 EIF5BO60841 1220 aaKnown RBP20.82■□□□□ 0.92
CCDC61-201ENST00000536603 PLEKHA8P1O95397 391 aa20.82■□□□□ 0.92
CCDC61-201ENST00000536603 SNAI1O95863 264 aaPredicted RBP20.82■□□□□ 0.92
CCDC61-201ENST00000536603 GNAQP50148 359 aa20.82■□□□□ 0.92
CCDC61-201ENST00000536603 ACLYP53396 1101 aa20.82■□□□□ 0.92
CCDC61-201ENST00000536603 RNF207Q6ZRF8 634 aa20.82■□□□□ 0.92
CCDC61-201ENST00000536603 CMTR1Q8N1G2 835 aaKnown RBP20.82■□□□□ 0.92
CCDC61-201ENST00000536603 PIBF1Q8WXW3 757 aa20.82■□□□□ 0.92
CCDC61-201ENST00000536603 ZSWIM6Q9HCJ5 1215 aa20.82■□□□□ 0.92
CCDC61-201ENST00000536603 ZHX1Q9UKY1 873 aaPredicted RBP20.82■□□□□ 0.92
CCDC61-201ENST00000536603 FAM184BQ9ULE4 1060 aa20.82■□□□□ 0.92
CCDC61-201ENST00000536603 MRPL11Q9Y3B7 192 aaKnown RBP20.82■□□□□ 0.92
CCDC61-201ENST00000536603 SYNGAP1Q96PV0 1343 aa20.81■□□□□ 0.92
CCDC61-201ENST00000536603 PNMA6FA0A0J9YX94 578 aa20.81■□□□□ 0.92
CCDC61-201ENST00000536603 KLF18A0A0U1RQI7 1052 aa20.81■□□□□ 0.92
CCDC61-201ENST00000536603 KIAA0355O15063 1070 aa20.81■□□□□ 0.92
CCDC61-201ENST00000536603 ZBTB43O43298 467 aa20.81■□□□□ 0.92
CCDC61-201ENST00000536603 PPP1R11O60927 126 aaPredicted RBP20.81■□□□□ 0.92
CCDC61-201ENST00000536603 CALML3P27482 149 aa20.81■□□□□ 0.92
CCDC61-201ENST00000536603 SMARCA1P28370 1054 aa20.81■□□□□ 0.92
CCDC61-201ENST00000536603 EPHB4P54760 987 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms