RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 BMP2KLQ5H9B9 411 aa14.6□□□□□ -0.07
PRKDC-207ENST00000536483 ZNF365Q70YC5 407 aa14.6□□□□□ -0.07
PRKDC-207ENST00000536483 IQCA1Q86XH1 822 aa14.6□□□□□ -0.07
PRKDC-207ENST00000536483 PBX4Q9BYU1 374 aa14.6□□□□□ -0.07
PRKDC-207ENST00000536483 PDGFCQ9NRA1 345 aa14.6□□□□□ -0.07
PRKDC-207ENST00000536483 ZSWIM5Q9P217 1185 aa14.6□□□□□ -0.07
PRKDC-207ENST00000536483 PRR12Q9ULL5 1215 aa14.6□□□□□ -0.07
PRKDC-207ENST00000536483 MTMR7Q9Y216 660 aa14.6□□□□□ -0.07
PRKDC-207ENST00000536483 GNEQ9Y223 722 aaKnown RBP14.6□□□□□ -0.07
PRKDC-207ENST00000536483 MUC3AQ02505 3323 aa14.59□□□□□ -0.07
PRKDC-207ENST00000536483 DYNC1LI2O43237 492 aaPredicted RBP14.59□□□□□ -0.07
PRKDC-207ENST00000536483 KDM4AO75164 1064 aa14.59□□□□□ -0.07
PRKDC-207ENST00000536483 CD4P01730 458 aa14.59□□□□□ -0.07
PRKDC-207ENST00000536483 SMPD1P17405 629 aa14.59□□□□□ -0.07
PRKDC-207ENST00000536483 CYP2C18P33260 490 aa14.59□□□□□ -0.07
PRKDC-207ENST00000536483 PTH1RQ03431 593 aa14.59□□□□□ -0.07
PRKDC-207ENST00000536483 ZNF543Q08ER8 600 aa14.59□□□□□ -0.07
PRKDC-207ENST00000536483 MUM1L1Q5H9M0 696 aa14.59□□□□□ -0.07
PRKDC-207ENST00000536483 RASIP1Q5U651 963 aa14.59□□□□□ -0.07
PRKDC-207ENST00000536483 EEPD1Q7L9B9 569 aa14.59□□□□□ -0.07
PRKDC-207ENST00000536483 TLK2Q86UE8 772 aa14.59□□□□□ -0.07
PRKDC-207ENST00000536483 USP38Q8NB14 1042 aa14.59□□□□□ -0.07
PRKDC-207ENST00000536483 ZSCAN10Q96SZ4 725 aaPredicted RBP14.59□□□□□ -0.07
PRKDC-207ENST00000536483 RANBP17Q9H2T7 1088 aaKnown RBP14.59□□□□□ -0.07
PRKDC-207ENST00000536483 CYP39A1Q9NYL5 469 aa14.59□□□□□ -0.07
PRKDC-207ENST00000536483 PNMA2Q9UL42 364 aa14.59□□□□□ -0.07
PRKDC-207ENST00000536483 U3KPZ7 1027 aaPredicted RBP14.59□□□□□ -0.07
PRKDC-207ENST00000536483 LAMA4Q16363 1823 aa14.59□□□□□ -0.07
PRKDC-207ENST00000536483 CYP21A2P08686 494 aa14.58□□□□□ -0.08
PRKDC-207ENST00000536483 ITGA7Q13683 1181 aa14.58□□□□□ -0.08
PRKDC-207ENST00000536483 FSCN1Q16658 493 aaKnown RBP14.58□□□□□ -0.08
PRKDC-207ENST00000536483 TMEM63BQ5T3F8 832 aa14.58□□□□□ -0.08
PRKDC-207ENST00000536483 GPATCH4Q5T3I0 446 aaKnown RBP14.58□□□□□ -0.08
PRKDC-207ENST00000536483 TAPT1Q6NXT6 567 aa14.58□□□□□ -0.08
PRKDC-207ENST00000536483 PSRC1Q6PGN9 363 aaPredicted RBP14.58□□□□□ -0.08
PRKDC-207ENST00000536483 NSMFQ6X4W1 530 aa14.58□□□□□ -0.08
PRKDC-207ENST00000536483 FBXO16Q8IX29 292 aaPredicted RBP14.58□□□□□ -0.08
PRKDC-207ENST00000536483 SLC43A3Q8NBI5 491 aa14.58□□□□□ -0.08
PRKDC-207ENST00000536483 PURBQ96QR8 312 aaKnown RBP14.58□□□□□ -0.08
PRKDC-207ENST00000536483 MAF1Q9H063 256 aa14.58□□□□□ -0.08
PRKDC-207ENST00000536483 AP5M1Q9H0R1 490 aa14.58□□□□□ -0.08
PRKDC-207ENST00000536483 CCPG1Q9ULG6 757 aa14.58□□□□□ -0.08
PRKDC-207ENST00000536483 TTC28Q96AY4 2481 aa14.57□□□□□ -0.08
PRKDC-207ENST00000536483 B4E1Z4 1266 aa14.57□□□□□ -0.08
PRKDC-207ENST00000536483 CABYRO75952 493 aa14.57□□□□□ -0.08
PRKDC-207ENST00000536483 ICAM1P05362 532 aa14.57□□□□□ -0.08
PRKDC-207ENST00000536483 SEC23AQ15436 765 aa14.57□□□□□ -0.08
PRKDC-207ENST00000536483 IQSEC1Q6DN90 963 aa14.57□□□□□ -0.08
PRKDC-207ENST00000536483 ENAHQ8N8S7 591 aaPredicted RBP14.57□□□□□ -0.08
PRKDC-207ENST00000536483 HIPK3Q9H422 1215 aa14.57□□□□□ -0.08
PRKDC-207ENST00000536483 IL23AQ9NPF7 189 aa14.57□□□□□ -0.08
PRKDC-207ENST00000536483 GRIN2DO15399 1336 aa14.57□□□□□ -0.08
PRKDC-207ENST00000536483 UMODL1Q5DID0 1318 aa14.57□□□□□ -0.08
PRKDC-207ENST00000536483 ZEB2O60315 1214 aa14.56□□□□□ -0.08
PRKDC-207ENST00000536483 SLC16A2P36021 539 aa14.56□□□□□ -0.08
PRKDC-207ENST00000536483 CCL23P55773 120 aa14.56□□□□□ -0.08
PRKDC-207ENST00000536483 PSMC6P62333 389 aa14.56□□□□□ -0.08
PRKDC-207ENST00000536483 CCDC96Q2M329 555 aa14.56□□□□□ -0.08
PRKDC-207ENST00000536483 SYDE2Q5VT97 1194 aa14.56□□□□□ -0.08
PRKDC-207ENST00000536483 TTBK2Q6IQ55 1244 aa14.56□□□□□ -0.08
PRKDC-207ENST00000536483 KIAA1211Q6ZU35 1233 aa14.56□□□□□ -0.08
PRKDC-207ENST00000536483 PNMA1Q8ND90 353 aa14.56□□□□□ -0.08
PRKDC-207ENST00000536483 PPM1EQ8WY54 764 aa14.56□□□□□ -0.08
PRKDC-207ENST00000536483 HERVK_113Q902F9 699 aa14.56□□□□□ -0.08
PRKDC-207ENST00000536483 MTA3Q9BTC8 594 aa14.56□□□□□ -0.08
PRKDC-207ENST00000536483 LSG1Q9H089 658 aaKnown RBP14.56□□□□□ -0.08
PRKDC-207ENST00000536483 TRPV6Q9H1D0 765 aa14.56□□□□□ -0.08
PRKDC-207ENST00000536483 PRDM12Q9H4Q4 367 aa14.56□□□□□ -0.08
PRKDC-207ENST00000536483 PRDM6Q9NQX0 595 aa14.56□□□□□ -0.08
PRKDC-207ENST00000536483 CXXC1Q9P0U4 656 aaPredicted RBP14.56□□□□□ -0.08
PRKDC-207ENST00000536483 WDR19Q8NEZ3 1342 aa14.56□□□□□ -0.08
PRKDC-207ENST00000536483 MYO9BQ13459 2157 aa14.56□□□□□ -0.08
PRKDC-207ENST00000536483 LOC102724159A0A0B4J2E5 919 aa14.55□□□□□ -0.08
PRKDC-207ENST00000536483 FGBP02675 491 aa14.55□□□□□ -0.08
PRKDC-207ENST00000536483 BAATQ14032 418 aaPredicted RBP14.55□□□□□ -0.08
PRKDC-207ENST00000536483 PWP2Q15269 919 aaKnown RBP14.55□□□□□ -0.08
PRKDC-207ENST00000536483 OTOP2Q7RTS6 562 aa14.55□□□□□ -0.08
PRKDC-207ENST00000536483 SYMPKQ92797 1274 aaKnown RBP14.55□□□□□ -0.08
PRKDC-207ENST00000536483 GAS2L1Q99501 681 aaPredicted RBP14.55□□□□□ -0.08
PRKDC-207ENST00000536483 ZKSCAN3Q9BRR0 538 aa14.55□□□□□ -0.08
PRKDC-207ENST00000536483 ESYT1Q9BSJ8 1104 aa14.55□□□□□ -0.08
PRKDC-207ENST00000536483 VTA1Q9NP79 307 aa14.55□□□□□ -0.08
PRKDC-207ENST00000536483 Q9Y3F1 56 aa14.55□□□□□ -0.08
PRKDC-207ENST00000536483 TNKSO95271 1327 aa14.55□□□□□ -0.08
PRKDC-207ENST00000536483 E7EWF7 191 aa14.54□□□□□ -0.08
PRKDC-207ENST00000536483 B4GALT4O60513 344 aa14.54□□□□□ -0.08
PRKDC-207ENST00000536483 TRDNQ13061 729 aa14.54□□□□□ -0.08
PRKDC-207ENST00000536483 ASPRV1Q53RT3 343 aa14.54□□□□□ -0.08
PRKDC-207ENST00000536483 ERICH6BQ5W0A0 696 aa14.54□□□□□ -0.08
PRKDC-207ENST00000536483 CYB5R4Q7L1T6 521 aa14.54□□□□□ -0.08
PRKDC-207ENST00000536483 RGS22Q8NE09 1264 aa14.54□□□□□ -0.08
PRKDC-207ENST00000536483 MORC4Q8TE76 937 aa14.54□□□□□ -0.08
PRKDC-207ENST00000536483 UBAC1Q9BSL1 405 aa14.54□□□□□ -0.08
PRKDC-207ENST00000536483 NOC4LQ9BVI4 516 aaKnown RBP14.54□□□□□ -0.08
PRKDC-207ENST00000536483 WNT8AQ9H1J5 351 aa14.54□□□□□ -0.08
PRKDC-207ENST00000536483 MTIF3Q9H2K0 278 aaKnown RBP14.54□□□□□ -0.08
PRKDC-207ENST00000536483 KAT14Q9H8E8 782 aa14.54□□□□□ -0.08
PRKDC-207ENST00000536483 MSRAQ9UJ68 235 aa14.54□□□□□ -0.08
PRKDC-207ENST00000536483 FRMPD2Q68DX3 1309 aaPredicted RBP14.53□□□□□ -0.08
PRKDC-207ENST00000536483 NFIBO00712 420 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms