RNA–Protein interactions for RNA: ENST00000536003.5

PAAF1-207, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-207ENST00000536003 VTA1Q9NP79 307 aa17.98■□□□□ 0.47
PAAF1-207ENST00000536003 TBX21Q9UL17 535 aa17.98■□□□□ 0.47
PAAF1-207ENST00000536003 KIAA1217Q5T5P2 1943 aa17.97■□□□□ 0.47
PAAF1-207ENST00000536003 CHD9Q3L8U1 2897 aa17.97■□□□□ 0.47
PAAF1-207ENST00000536003 CDK7P50613 346 aa17.97■□□□□ 0.47
PAAF1-207ENST00000536003 SEC23AQ15436 765 aa17.97■□□□□ 0.47
PAAF1-207ENST00000536003 FSCN1Q16658 493 aaKnown RBP17.97■□□□□ 0.47
PAAF1-207ENST00000536003 UBAC1Q9BSL1 405 aa17.97■□□□□ 0.47
PAAF1-207ENST00000536003 CNNM2Q9H8M5 875 aa17.97■□□□□ 0.47
PAAF1-207ENST00000536003 TMEM39AQ9NV64 488 aa17.97■□□□□ 0.47
PAAF1-207ENST00000536003 BAZ2BQ9UIF8 2168 aaKnown RBP17.96■□□□□ 0.47
PAAF1-207ENST00000536003 A0A0U1RQG5 324 aaPredicted RBP17.96■□□□□ 0.47
PAAF1-207ENST00000536003 RAG1P15918 1043 aa17.96■□□□□ 0.47
PAAF1-207ENST00000536003 ASPRV1Q53RT3 343 aa17.96■□□□□ 0.47
PAAF1-207ENST00000536003 CCDC178Q5BJE1 867 aa17.96■□□□□ 0.47
PAAF1-207ENST00000536003 KIAA1211Q6ZU35 1233 aa17.96■□□□□ 0.47
PAAF1-207ENST00000536003 SKAP1Q86WV1 359 aa17.96■□□□□ 0.47
PAAF1-207ENST00000536003 STAG2Q8N3U4 1231 aa17.96■□□□□ 0.47
PAAF1-207ENST00000536003 SENP2Q9HC62 589 aa17.96■□□□□ 0.47
PAAF1-207ENST00000536003 ADD3Q9UEY8 706 aaKnown RBP17.96■□□□□ 0.47
PAAF1-207ENST00000536003 DCDC2CA8MYV0 355 aa17.95■□□□□ 0.46
PAAF1-207ENST00000536003 SGSM2O43147 1006 aa17.95■□□□□ 0.46
PAAF1-207ENST00000536003 DYNC1LI2O43237 492 aaPredicted RBP17.95■□□□□ 0.46
PAAF1-207ENST00000536003 QRICH1Q2TAL8 776 aa17.95■□□□□ 0.46
PAAF1-207ENST00000536003 IFIT1BQ5T764 474 aaKnown RBP17.95■□□□□ 0.46
PAAF1-207ENST00000536003 STOX1Q6ZVD7 989 aa17.95■□□□□ 0.46
PAAF1-207ENST00000536003 FAM126BQ8IXS8 530 aa17.95■□□□□ 0.46
PAAF1-207ENST00000536003 TBC1D5Q92609 795 aa17.95■□□□□ 0.46
PAAF1-207ENST00000536003 VTI1AQ96AJ9 217 aa17.95■□□□□ 0.46
PAAF1-207ENST00000536003 VCANP13611 3396 aa17.95■□□□□ 0.46
PAAF1-207ENST00000536003 GRIN2DO15399 1336 aa17.95■□□□□ 0.46
PAAF1-207ENST00000536003 ARVCFO00192 962 aa17.94■□□□□ 0.46
PAAF1-207ENST00000536003 PARP1P09874 1014 aaKnown RBP17.94■□□□□ 0.46
PAAF1-207ENST00000536003 EDNRBP24530 442 aa17.94■□□□□ 0.46
PAAF1-207ENST00000536003 DUSP28Q4G0W2 176 aa17.94■□□□□ 0.46
PAAF1-207ENST00000536003 JMJD4Q9H9V9 463 aa17.94■□□□□ 0.46
PAAF1-207ENST00000536003 COL20A1Q9P218 1284 aa17.94■□□□□ 0.46
PAAF1-207ENST00000536003 MROH7Q68CQ1 1323 aa17.94■□□□□ 0.46
PAAF1-207ENST00000536003 PSMC6P62333 389 aa17.94■□□□□ 0.46
PAAF1-207ENST00000536003 FPGSQ05932 587 aa17.94■□□□□ 0.46
PAAF1-207ENST00000536003 SLC35G1Q2M3R5 365 aa17.94■□□□□ 0.46
PAAF1-207ENST00000536003 IQSEC1Q6DN90 963 aa17.94■□□□□ 0.46
PAAF1-207ENST00000536003 RUFY2Q8WXA3 655 aa17.94■□□□□ 0.46
PAAF1-207ENST00000536003 WDR11Q9BZH6 1224 aa17.94■□□□□ 0.46
PAAF1-207ENST00000536003 MTMR10Q9NXD2 777 aa17.94■□□□□ 0.46
PAAF1-207ENST00000536003 SCN10AQ9Y5Y9 1956 aa17.94■□□□□ 0.46
PAAF1-207ENST00000536003 DHX16O60231 1041 aaKnown RBP17.93■□□□□ 0.46
PAAF1-207ENST00000536003 CHST3Q7LGC8 479 aa17.93■□□□□ 0.46
PAAF1-207ENST00000536003 SLC43A3Q8NBI5 491 aa17.93■□□□□ 0.46
PAAF1-207ENST00000536003 AP5M1Q9H0R1 490 aa17.93■□□□□ 0.46
PAAF1-207ENST00000536003 VAT1LQ9HCJ6 419 aa17.93■□□□□ 0.46
PAAF1-207ENST00000536003 MAD2L2Q9UI95 211 aa17.93■□□□□ 0.46
PAAF1-207ENST00000536003 PNMA2Q9UL42 364 aa17.93■□□□□ 0.46
PAAF1-207ENST00000536003 ABCB11O95342 1321 aa17.92■□□□□ 0.46
PAAF1-207ENST00000536003 LOC102724159A0A0B4J2E5 919 aa17.92■□□□□ 0.46
PAAF1-207ENST00000536003 RBM47A0AV96 593 aaKnown RBP17.92■□□□□ 0.46
PAAF1-207ENST00000536003 OPLAHO14841 1288 aa17.92■□□□□ 0.46
PAAF1-207ENST00000536003 PPP1R11O60927 126 aaPredicted RBP17.92■□□□□ 0.46
PAAF1-207ENST00000536003 CD4P01730 458 aa17.92■□□□□ 0.46
PAAF1-207ENST00000536003 PDE4DQ08499 809 aa17.92■□□□□ 0.46
PAAF1-207ENST00000536003 COL9A3Q14050 684 aaPredicted RBP17.92■□□□□ 0.46
PAAF1-207ENST00000536003 PWP2Q15269 919 aaKnown RBP17.92■□□□□ 0.46
PAAF1-207ENST00000536003 DNERQ8NFT8 737 aa17.92■□□□□ 0.46
PAAF1-207ENST00000536003 COPS5Q92905 334 aa17.92■□□□□ 0.46
PAAF1-207ENST00000536003 FAM161BQ96MY7 647 aa17.92■□□□□ 0.46
PAAF1-207ENST00000536003 PPP1R12CQ9BZL4 782 aa17.92■□□□□ 0.46
PAAF1-207ENST00000536003 Q9Y3F1 56 aa17.92■□□□□ 0.46
PAAF1-207ENST00000536003 CHD7Q9P2D1 2997 aa17.92■□□□□ 0.46
PAAF1-207ENST00000536003 E7EWF7 191 aa17.91■□□□□ 0.46
PAAF1-207ENST00000536003 ARIH2O95376 493 aa17.91■□□□□ 0.46
PAAF1-207ENST00000536003 TIMP1P01033 207 aa17.91■□□□□ 0.46
PAAF1-207ENST00000536003 ANTXR2P58335 489 aa17.91■□□□□ 0.46
PAAF1-207ENST00000536003 GUCD1Q96NT3 240 aa17.91■□□□□ 0.46
PAAF1-207ENST00000536003 U3KPZ7 1027 aaPredicted RBP17.91■□□□□ 0.46
PAAF1-207ENST00000536003 UMODL1Q5DID0 1318 aa17.91■□□□□ 0.46
PAAF1-207ENST00000536003 GBF1Q92538 1859 aa17.91■□□□□ 0.46
PAAF1-207ENST00000536003 ITGA7Q13683 1181 aa17.9■□□□□ 0.46
PAAF1-207ENST00000536003 RGS22Q8NE09 1264 aa17.9■□□□□ 0.46
PAAF1-207ENST00000536003 SYTL5Q8TDW5 730 aaPredicted RBP17.9■□□□□ 0.46
PAAF1-207ENST00000536003 RNPC3Q96LT9 517 aaKnown RBP17.9■□□□□ 0.46
PAAF1-207ENST00000536003 TAAR1Q96RJ0 339 aa17.9■□□□□ 0.46
PAAF1-207ENST00000536003 KLRF2D3W0D1 207 aa17.9■□□□□ 0.46
PAAF1-207ENST00000536003 CSF2RAP15509 400 aa17.9■□□□□ 0.46
PAAF1-207ENST00000536003 TRDNQ13061 729 aa17.9■□□□□ 0.46
PAAF1-207ENST00000536003 PPP2R5BQ15173 497 aa17.9■□□□□ 0.46
PAAF1-207ENST00000536003 MFSD5Q6N075 450 aa17.9■□□□□ 0.46
PAAF1-207ENST00000536003 C16orf59Q7L2K0 433 aa17.9■□□□□ 0.46
PAAF1-207ENST00000536003 FBXO11Q86XK2 927 aa17.9■□□□□ 0.46
PAAF1-207ENST00000536003 PPP1R13LQ8WUF5 828 aa17.9■□□□□ 0.46
PAAF1-207ENST00000536003 MAP4K1Q92918 833 aa17.9■□□□□ 0.46
PAAF1-207ENST00000536003 MTMR8Q96EF0 704 aa17.9■□□□□ 0.46
PAAF1-207ENST00000536003 RBM8AQ9Y5S9 174 aaKnown RBP17.9■□□□□ 0.46
PAAF1-207ENST00000536003 TANC1Q9C0D5 1861 aa17.89■□□□□ 0.46
PAAF1-207ENST00000536003 SCN5AQ14524 2016 aa17.89■□□□□ 0.45
PAAF1-207ENST00000536003 PALM3A6NDB9 673 aaPredicted RBP17.89■□□□□ 0.45
PAAF1-207ENST00000536003 B4GALT4O60513 344 aa17.89■□□□□ 0.45
PAAF1-207ENST00000536003 CABYRO75952 493 aa17.89■□□□□ 0.45
PAAF1-207ENST00000536003 CYP2C18P33260 490 aa17.89■□□□□ 0.45
PAAF1-207ENST00000536003 PURAQ00577 322 aaKnown RBP17.89■□□□□ 0.45
PAAF1-207ENST00000536003 GRM4Q14833 912 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms