RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 GSDMAQ96QA5 445 aa20.6■□□□□ 0.89
HTATSF1-204ENST00000535601 BMP3P12645 472 aa20.6■□□□□ 0.89
HTATSF1-204ENST00000535601 GLIPR1L2Q4G1C9 344 aa20.6■□□□□ 0.89
HTATSF1-204ENST00000535601 TBC1D10BQ4KMP7 808 aaPredicted RBP20.6■□□□□ 0.89
HTATSF1-204ENST00000535601 FAM151AQ8WW52 585 aa20.6■□□□□ 0.89
HTATSF1-204ENST00000535601 JDP2Q8WYK2 163 aa20.6■□□□□ 0.89
HTATSF1-204ENST00000535601 MTMR8Q96EF0 704 aa20.6■□□□□ 0.89
HTATSF1-204ENST00000535601 TPM3P06753 285 aa20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 CCT6AP40227 531 aaKnown RBP20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 PRCPP42785 496 aa20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 ENOX1Q8TC92 643 aaKnown RBP20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 SLC16A10Q8TF71 515 aa20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 DCAF4Q8WV16 495 aa20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 ARFGEF1Q9Y6D6 1849 aa20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 MARCH6O60337 910 aa20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 ZNF18P17022 549 aa20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 PMS1P54277 932 aaKnown RBP20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 UBXN2AP68543 259 aa20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 KMT5BQ4FZB7 885 aa20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 CIAPIN1Q6FI81 312 aa20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 KCNK18Q7Z418 384 aa20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 NLGN2Q8NFZ4 835 aa20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 KIFC2Q96AC6 838 aa20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 CCDC34Q96HJ3 373 aa20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 MYOZ2Q9NPC6 264 aa20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 SPTLC3Q9NUV7 552 aa20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 LRWD1Q9UFC0 647 aa20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 DDX25Q9UHL0 483 aaKnown RBP20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 ZBTB21Q9ULJ3 1066 aa20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 POLD1P28340 1107 aa20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 STAT3P40763 770 aa20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 CLK2P49760 499 aaKnown RBP20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 ECM1Q16610 540 aa20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 SYDE2Q5VT97 1194 aa20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 DYMQ7RTS9 669 aa20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 TRIML1Q8N9V2 468 aa20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 MTMR9Q96QG7 549 aa20.59■□□□□ 0.89
HTATSF1-204ENST00000535601 FCHSD1Q86WN1 690 aa20.58■□□□□ 0.89
HTATSF1-204ENST00000535601 HAS1Q92839 578 aa20.58■□□□□ 0.89
HTATSF1-204ENST00000535601 FCER1AP12319 257 aa20.58■□□□□ 0.88
HTATSF1-204ENST00000535601 MRPL12P52815 198 aaKnown RBP20.58■□□□□ 0.88
HTATSF1-204ENST00000535601 MCM6Q14566 821 aa20.58■□□□□ 0.88
HTATSF1-204ENST00000535601 PRR12Q9ULL5 1215 aa20.58■□□□□ 0.88
HTATSF1-204ENST00000535601 MEIS2O14770 477 aa20.57■□□□□ 0.88
HTATSF1-204ENST00000535601 ADKP55263 362 aaKnown RBP20.57■□□□□ 0.88
HTATSF1-204ENST00000535601 CYP2W1Q8TAV3 490 aa20.57■□□□□ 0.88
HTATSF1-204ENST00000535601 DACH1Q9UI36 760 aa20.57■□□□□ 0.88
HTATSF1-204ENST00000535601 RASA3Q14644 834 aa20.57■□□□□ 0.88
HTATSF1-204ENST00000535601 TPD52L1Q16890 204 aaPredicted RBP20.57■□□□□ 0.88
HTATSF1-204ENST00000535601 CPLX3Q8WVH0 158 aa20.57■□□□□ 0.88
HTATSF1-204ENST00000535601 NELFBQ8WX92 580 aa20.57■□□□□ 0.88
HTATSF1-204ENST00000535601 KLRC4O43908 158 aa20.56■□□□□ 0.88
HTATSF1-204ENST00000535601 NPM3O75607 178 aaKnown RBP20.56■□□□□ 0.88
HTATSF1-204ENST00000535601 PRPHP41219 470 aa20.56■□□□□ 0.88
HTATSF1-204ENST00000535601 GRB10Q13322 594 aa20.56■□□□□ 0.88
HTATSF1-204ENST00000535601 ZNF592Q92610 1267 aa20.56■□□□□ 0.88
HTATSF1-204ENST00000535601 ANO3Q9BYT9 981 aa20.56■□□□□ 0.88
HTATSF1-204ENST00000535601 CCSER1Q9C0I3 900 aa20.56■□□□□ 0.88
HTATSF1-204ENST00000535601 ERCC3P19447 782 aa20.56■□□□□ 0.88
HTATSF1-204ENST00000535601 SFPQP23246 707 aaKnown RBP eCLIP20.56■□□□□ 0.88
HTATSF1-204ENST00000535601 ASIC1P78348 528 aa20.56■□□□□ 0.88
HTATSF1-204ENST00000535601 RAD51AP2Q09MP3 1159 aa20.56■□□□□ 0.88
HTATSF1-204ENST00000535601 FBXO11Q86XK2 927 aa20.56■□□□□ 0.88
HTATSF1-204ENST00000535601 PNMA5Q96PV4 448 aa20.56■□□□□ 0.88
HTATSF1-204ENST00000535601 OPLAHO14841 1288 aa20.56■□□□□ 0.88
HTATSF1-204ENST00000535601 VSTM4Q8IW00 320 aa20.56■□□□□ 0.88
HTATSF1-204ENST00000535601 IGSF22Q8N9C0 903 aa20.56■□□□□ 0.88
HTATSF1-204ENST00000535601 SNX29Q8TEQ0 813 aa20.56■□□□□ 0.88
HTATSF1-204ENST00000535601 RRP9O43818 475 aaKnown RBP20.55■□□□□ 0.88
HTATSF1-204ENST00000535601 KBTBD4Q9NVX7 518 aa20.55■□□□□ 0.88
HTATSF1-204ENST00000535601 HERC5Q9UII4 1024 aaKnown RBP20.55■□□□□ 0.88
HTATSF1-204ENST00000535601 hCG_1984214I3L0E3 225 aa20.55■□□□□ 0.88
HTATSF1-204ENST00000535601 LAD1O00515 517 aa20.55■□□□□ 0.88
HTATSF1-204ENST00000535601 CACNB1Q02641 598 aaPredicted RBP20.55■□□□□ 0.88
HTATSF1-204ENST00000535601 PRR16Q569H4 304 aa20.55■□□□□ 0.88
HTATSF1-204ENST00000535601 SPATA1Q5VX52 437 aa20.55■□□□□ 0.88
HTATSF1-204ENST00000535601 ZNF713Q8N859 430 aaPredicted RBP20.55■□□□□ 0.88
HTATSF1-204ENST00000535601 GMCL1P1Q8NEA9 526 aa20.55■□□□□ 0.88
HTATSF1-204ENST00000535601 AMNQ9BXJ7 453 aa20.55■□□□□ 0.88
HTATSF1-204ENST00000535601 MTFR1LQ9H019 292 aa20.55■□□□□ 0.88
HTATSF1-204ENST00000535601 VPS16Q9H269 839 aa20.55■□□□□ 0.88
HTATSF1-204ENST00000535601 SSBP05455 408 aaKnown RBP eCLIP20.54■□□□□ 0.88
HTATSF1-204ENST00000535601 GMPSP49915 693 aaPredicted RBP20.54■□□□□ 0.88
HTATSF1-204ENST00000535601 POLD4Q9HCU8 107 aa20.54■□□□□ 0.88
HTATSF1-204ENST00000535601 NKRFO15226 690 aaKnown RBP eCLIP20.54■□□□□ 0.88
HTATSF1-204ENST00000535601 MYO1BO43795 1136 aa20.54■□□□□ 0.88
HTATSF1-204ENST00000535601 ERCC5P28715 1186 aaPredicted RBP20.54■□□□□ 0.88
HTATSF1-204ENST00000535601 STK4Q13043 487 aa20.54■□□□□ 0.88
HTATSF1-204ENST00000535601 CEP135Q66GS9 1140 aa20.54■□□□□ 0.88
HTATSF1-204ENST00000535601 MICALL2Q8IY33 904 aa20.54■□□□□ 0.88
HTATSF1-204ENST00000535601 BLOC1S4Q9NUP1 217 aa20.54■□□□□ 0.88
HTATSF1-204ENST00000535601 KIF13BQ9NQT8 1826 aa20.54■□□□□ 0.88
HTATSF1-204ENST00000535601 UQCRHLA0A096LP55 91 aa20.53■□□□□ 0.88
HTATSF1-204ENST00000535601 CFBP00751 764 aa20.53■□□□□ 0.88
HTATSF1-204ENST00000535601 UQCRHP07919 91 aa20.53■□□□□ 0.88
HTATSF1-204ENST00000535601 TGFB2P61812 414 aa20.53■□□□□ 0.88
HTATSF1-204ENST00000535601 ZNF658Q5TYW1 1059 aaPredicted RBP20.53■□□□□ 0.88
HTATSF1-204ENST00000535601 DLK2Q6UY11 383 aa20.53■□□□□ 0.88
HTATSF1-204ENST00000535601 APTXQ7Z2E3 356 aaKnown RBP20.53■□□□□ 0.88
HTATSF1-204ENST00000535601 GLIS3Q8NEA6 775 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms