RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 SEMA7AO75326 666 aa7.97□□□□□ -1.13
PRKDC-205ENST00000535375 TSPAN15O95858 294 aa7.97□□□□□ -1.13
PRKDC-205ENST00000535375 MSL3P1P0C860 447 aa7.97□□□□□ -1.13
PRKDC-205ENST00000535375 NR1I3Q14994 352 aa7.97□□□□□ -1.13
PRKDC-205ENST00000535375 SLC10A6Q3KNW5 377 aa7.97□□□□□ -1.13
PRKDC-205ENST00000535375 ATG14Q6ZNE5 492 aa7.97□□□□□ -1.13
PRKDC-205ENST00000535375 MYOCOSA0A1B0GUC4 107 aa7.96□□□□□ -1.14
PRKDC-205ENST00000535375 IQCA1LA6NCM1 817 aa7.96□□□□□ -1.14
PRKDC-205ENST00000535375 ETV2O00321 342 aaPredicted RBP7.96□□□□□ -1.14
PRKDC-205ENST00000535375 TBX1O43435 398 aa7.96□□□□□ -1.14
PRKDC-205ENST00000535375 CPP00450 1065 aa7.96□□□□□ -1.14
PRKDC-205ENST00000535375 THBDP07204 575 aa7.96□□□□□ -1.14
PRKDC-205ENST00000535375 C1QTNF9P0C862 333 aa7.96□□□□□ -1.14
PRKDC-205ENST00000535375 TACR1P25103 407 aa7.96□□□□□ -1.14
PRKDC-205ENST00000535375 VIPR1P32241 457 aa7.96□□□□□ -1.14
PRKDC-205ENST00000535375 SF3A1Q15459 793 aaKnown RBP7.96□□□□□ -1.14
PRKDC-205ENST00000535375 LZTR1Q8N653 840 aa7.96□□□□□ -1.14
PRKDC-205ENST00000535375 TNFRSF12AQ9NP84 129 aa7.96□□□□□ -1.14
PRKDC-205ENST00000535375 DBR1Q9UK59 544 aaKnown RBP7.96□□□□□ -1.14
PRKDC-205ENST00000535375 GLDCP23378 1020 aa7.95□□□□□ -1.14
PRKDC-205ENST00000535375 YBX1P67809 324 aaKnown RBP7.95□□□□□ -1.14
PRKDC-205ENST00000535375 DLG4P78352 724 aa7.95□□□□□ -1.14
PRKDC-205ENST00000535375 NBPF6Q5VWK0 638 aa7.95□□□□□ -1.14
PRKDC-205ENST00000535375 IQCEQ6IPM2 695 aa7.95□□□□□ -1.14
PRKDC-205ENST00000535375 PAQR3Q6TCH7 311 aa7.95□□□□□ -1.14
PRKDC-205ENST00000535375 NBPF4Q96M43 638 aa7.95□□□□□ -1.14
PRKDC-205ENST00000535375 MMP19Q99542 508 aa7.95□□□□□ -1.14
PRKDC-205ENST00000535375 GULP1Q9UBP9 304 aa7.95□□□□□ -1.14
PRKDC-205ENST00000535375 RWDD3Q9Y3V2 267 aa7.95□□□□□ -1.14
PRKDC-205ENST00000535375 C7orf72A4D263 438 aa7.94□□□□□ -1.14
PRKDC-205ENST00000535375 DBX1A6NMT0 343 aa7.94□□□□□ -1.14
PRKDC-205ENST00000535375 CYBBP04839 570 aa7.94□□□□□ -1.14
PRKDC-205ENST00000535375 PPP2R2AP63151 447 aa7.94□□□□□ -1.14
PRKDC-205ENST00000535375 HSP90AA2PQ14568 343 aaPredicted RBP7.94□□□□□ -1.14
PRKDC-205ENST00000535375 RPTNQ6XPR3 784 aa7.94□□□□□ -1.14
PRKDC-205ENST00000535375 NPM2Q86SE8 214 aaKnown RBP7.94□□□□□ -1.14
PRKDC-205ENST00000535375 ST13P5Q8NFI4 369 aaPredicted RBP7.94□□□□□ -1.14
PRKDC-205ENST00000535375 ARMC5Q96C12 935 aa7.94□□□□□ -1.14
PRKDC-205ENST00000535375 SGPP1Q9BX95 441 aa7.94□□□□□ -1.14
PRKDC-205ENST00000535375 KLHL14Q9P2G3 628 aa7.94□□□□□ -1.14
PRKDC-205ENST00000535375 CCDC85CA6NKD9 419 aa7.93□□□□□ -1.14
PRKDC-205ENST00000535375 F8W031 263 aaPredicted RBP7.93□□□□□ -1.14
PRKDC-205ENST00000535375 MEFVO15553 781 aaPredicted RBP7.93□□□□□ -1.14
PRKDC-205ENST00000535375 SRGAP3O43295 1099 aa7.93□□□□□ -1.14
PRKDC-205ENST00000535375 MED14OSP0DP75 135 aa7.93□□□□□ -1.14
PRKDC-205ENST00000535375 CBX2Q14781 532 aaPredicted RBP7.93□□□□□ -1.14
PRKDC-205ENST00000535375 E4F1Q66K89 784 aaPredicted RBP7.93□□□□□ -1.14
PRKDC-205ENST00000535375 ZC3H14Q6PJT7 736 aaKnown RBP7.93□□□□□ -1.14
PRKDC-205ENST00000535375 TMC6Q7Z403 805 aa7.93□□□□□ -1.14
PRKDC-205ENST00000535375 FRS2Q8WU20 508 aa7.93□□□□□ -1.14
PRKDC-205ENST00000535375 SGSM3Q96HU1 749 aa7.93□□□□□ -1.14
PRKDC-205ENST00000535375 TOX2Q96NM4 488 aa7.93□□□□□ -1.14
PRKDC-205ENST00000535375 BTG4Q9NY30 223 aa7.93□□□□□ -1.14
PRKDC-205ENST00000535375 A0A1W2PQU0 124 aa7.92□□□□□ -1.14
PRKDC-205ENST00000535375 MYO1BO43795 1136 aa7.92□□□□□ -1.14
PRKDC-205ENST00000535375 SCG5P05408 212 aa7.92□□□□□ -1.14
PRKDC-205ENST00000535375 DBHP09172 617 aa7.92□□□□□ -1.14
PRKDC-205ENST00000535375 MAPKAPK2P49137 400 aa7.92□□□□□ -1.14
PRKDC-205ENST00000535375 SF1Q15637 639 aaKnown RBP7.92□□□□□ -1.14
PRKDC-205ENST00000535375 SOGA3Q5TF21 947 aa7.92□□□□□ -1.14
PRKDC-205ENST00000535375 LRRC47Q8N1G4 583 aaKnown RBP7.92□□□□□ -1.14
PRKDC-205ENST00000535375 NPLOC4Q8TAT6 608 aa7.92□□□□□ -1.14
PRKDC-205ENST00000535375 DIO2Q92813 273 aa7.92□□□□□ -1.14
PRKDC-205ENST00000535375 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.92□□□□□ -1.14
PRKDC-205ENST00000535375 SIRPGQ9P1W8 387 aa7.92□□□□□ -1.14
PRKDC-205ENST00000535375 SMG5Q9UPR3 1016 aaKnown RBP7.92□□□□□ -1.14
PRKDC-205ENST00000535375 NPIPB6E9PJ23 425 aa7.91□□□□□ -1.14
PRKDC-205ENST00000535375 FUCA1P04066 466 aa7.91□□□□□ -1.14
PRKDC-205ENST00000535375 GFRA1P56159 465 aa7.91□□□□□ -1.14
PRKDC-205ENST00000535375 KCNAB2Q13303 367 aa7.91□□□□□ -1.14
PRKDC-205ENST00000535375 PPIL6Q8IXY8 311 aa7.91□□□□□ -1.14
PRKDC-205ENST00000535375 KCTD13Q8WZ19 329 aa7.91□□□□□ -1.14
PRKDC-205ENST00000535375 MBD1Q9UIS9 605 aaPredicted RBP7.91□□□□□ -1.14
PRKDC-205ENST00000535375 NUDT5Q9UKK9 219 aa7.91□□□□□ -1.14
PRKDC-205ENST00000535375 TIMM13Q9Y5L4 95 aaPredicted RBP7.91□□□□□ -1.14
PRKDC-205ENST00000535375 ZC3H12DA2A288 527 aaKnown RBP7.9□□□□□ -1.14
PRKDC-205ENST00000535375 PDPK1O15530 556 aa7.9□□□□□ -1.14
PRKDC-205ENST00000535375 KRT1P04264 644 aa7.9□□□□□ -1.14
PRKDC-205ENST00000535375 RPL11P62913 178 aaKnown RBP7.9□□□□□ -1.14
PRKDC-205ENST00000535375 KCNA10Q16322 511 aa7.9□□□□□ -1.14
PRKDC-205ENST00000535375 PRSS53Q2L4Q9 553 aa7.9□□□□□ -1.14
PRKDC-205ENST00000535375 PLEKHN1Q494U1 663 aaPredicted RBP7.9□□□□□ -1.14
PRKDC-205ENST00000535375 TMEM145Q8NBT3 493 aa7.9□□□□□ -1.14
PRKDC-205ENST00000535375 ZSCAN18Q8TBC5 510 aaPredicted RBP7.9□□□□□ -1.14
PRKDC-205ENST00000535375 IER2Q9BTL4 223 aa7.9□□□□□ -1.14
PRKDC-205ENST00000535375 CNTD2Q9H8S5 307 aa7.9□□□□□ -1.14
PRKDC-205ENST00000535375 CD320Q9NPF0 282 aa7.9□□□□□ -1.14
PRKDC-205ENST00000535375 MARCH2Q9P0N8 246 aa7.9□□□□□ -1.14
PRKDC-205ENST00000535375 CNOT6Q9ULM6 557 aaKnown RBP7.9□□□□□ -1.14
PRKDC-205ENST00000535375 PPP1R11O60927 126 aaPredicted RBP7.89□□□□□ -1.15
PRKDC-205ENST00000535375 GLI4P10075 376 aa7.89□□□□□ -1.15
PRKDC-205ENST00000535375 LTBRP36941 435 aa7.89□□□□□ -1.15
PRKDC-205ENST00000535375 GRIA2P42262 883 aa7.89□□□□□ -1.15
PRKDC-205ENST00000535375 CYP4F3Q08477 520 aa7.89□□□□□ -1.15
PRKDC-205ENST00000535375 INF2Q27J81 1249 aa7.89□□□□□ -1.15
PRKDC-205ENST00000535375 MTERF2Q49AM1 385 aa7.89□□□□□ -1.15
PRKDC-205ENST00000535375 ACBD5Q5T8D3 534 aaPredicted RBP7.89□□□□□ -1.15
PRKDC-205ENST00000535375 MBLAC2Q68D91 279 aa7.89□□□□□ -1.15
PRKDC-205ENST00000535375 CIAPIN1Q6FI81 312 aa7.89□□□□□ -1.15
PRKDC-205ENST00000535375 MZB1Q8WU39 189 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms