RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 ARL6IP4Q66PJ3 421 aaKnown RBP23.1■■□□□ 1.29
TNFRSF1A-205ENST00000534885 MRPL11Q9Y3B7 192 aaKnown RBP23.1■■□□□ 1.29
TNFRSF1A-205ENST00000534885 ABCB11O95342 1321 aa23.1■■□□□ 1.29
TNFRSF1A-205ENST00000534885 FSD2A1L4K1 749 aa23.1■■□□□ 1.29
TNFRSF1A-205ENST00000534885 PIK3CDO00329 1044 aa23.1■■□□□ 1.29
TNFRSF1A-205ENST00000534885 NEMFO60524 1076 aa23.1■■□□□ 1.29
TNFRSF1A-205ENST00000534885 LETM1O95202 739 aaPredicted RBP23.1■■□□□ 1.29
TNFRSF1A-205ENST00000534885 SYKP43405 635 aa23.1■■□□□ 1.29
TNFRSF1A-205ENST00000534885 CATSPERGQ6ZRH7 1159 aa23.1■■□□□ 1.29
TNFRSF1A-205ENST00000534885 CKAP2LQ8IYA6 745 aa23.1■■□□□ 1.29
TNFRSF1A-205ENST00000534885 TREML2Q5T2D2 321 aa23.09■■□□□ 1.29
TNFRSF1A-205ENST00000534885 LDLRAD1Q5T700 205 aa23.09■■□□□ 1.29
TNFRSF1A-205ENST00000534885 POTEDQ86YR6 584 aa23.09■■□□□ 1.29
TNFRSF1A-205ENST00000534885 EPSTI1Q96J88 318 aa23.09■■□□□ 1.29
TNFRSF1A-205ENST00000534885 KCNH3Q9ULD8 1083 aa23.09■■□□□ 1.29
TNFRSF1A-205ENST00000534885 LOC285556D6RIA3 1793 aa23.09■■□□□ 1.29
TNFRSF1A-205ENST00000534885 SLC37A4O43826 429 aa23.09■■□□□ 1.29
TNFRSF1A-205ENST00000534885 DSG3P32926 999 aa23.09■■□□□ 1.29
TNFRSF1A-205ENST00000534885 COG2Q14746 738 aa23.09■■□□□ 1.29
TNFRSF1A-205ENST00000534885 SPDYE3A6NKU9 549 aa23.08■■□□□ 1.29
TNFRSF1A-205ENST00000534885 ZBED4O75132 1171 aa23.08■■□□□ 1.29
TNFRSF1A-205ENST00000534885 RBM43Q6ZSC3 357 aaKnown RBP23.08■■□□□ 1.29
TNFRSF1A-205ENST00000534885 OPTNQ96CV9 577 aa23.08■■□□□ 1.29
TNFRSF1A-205ENST00000534885 FAM13BQ9NYF5 915 aa23.08■■□□□ 1.29
TNFRSF1A-205ENST00000534885 A0A0G2JLL6 359 aaPredicted RBP23.07■■□□□ 1.28
TNFRSF1A-205ENST00000534885 GOLGA6L3A6NEY3 463 aa23.07■■□□□ 1.28
TNFRSF1A-205ENST00000534885 DCAF8L1A6NGE4 600 aa23.07■■□□□ 1.28
TNFRSF1A-205ENST00000534885 LAD1O00515 517 aa23.07■■□□□ 1.28
TNFRSF1A-205ENST00000534885 ALAS1P13196 640 aa23.07■■□□□ 1.28
TNFRSF1A-205ENST00000534885 ORC2Q13416 577 aaPredicted RBP23.07■■□□□ 1.28
TNFRSF1A-205ENST00000534885 PRRT2Q7Z6L0 340 aaPredicted RBP23.07■■□□□ 1.28
TNFRSF1A-205ENST00000534885 FCHSD1Q86WN1 690 aa23.07■■□□□ 1.28
TNFRSF1A-205ENST00000534885 CRYGNQ8WXF5 182 aa23.07■■□□□ 1.28
TNFRSF1A-205ENST00000534885 SYMPKQ92797 1274 aaKnown RBP23.07■■□□□ 1.28
TNFRSF1A-205ENST00000534885 CTDP1Q9Y5B0 961 aaPredicted RBP23.07■■□□□ 1.28
TNFRSF1A-205ENST00000534885 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.07■■□□□ 1.28
TNFRSF1A-205ENST00000534885 GCOM1H8Y6P7 765 aaPredicted RBP23.07■■□□□ 1.28
TNFRSF1A-205ENST00000534885 NFIBO00712 420 aa23.07■■□□□ 1.28
TNFRSF1A-205ENST00000534885 FOSP01100 380 aaPredicted RBP23.07■■□□□ 1.28
TNFRSF1A-205ENST00000534885 OR52Z1P0C646 297 aa23.07■■□□□ 1.28
TNFRSF1A-205ENST00000534885 POLR2MP0CAP2 368 aa23.07■■□□□ 1.28
TNFRSF1A-205ENST00000534885 MCTP2Q6DN12 878 aa23.07■■□□□ 1.28
TNFRSF1A-205ENST00000534885 PPP4R3AQ6IN85 833 aa23.07■■□□□ 1.28
TNFRSF1A-205ENST00000534885 GADL1Q6ZQY3 521 aa23.07■■□□□ 1.28
TNFRSF1A-205ENST00000534885 REPS2Q8NFH8 660 aa23.07■■□□□ 1.28
TNFRSF1A-205ENST00000534885 CLEC4DQ8WXI8 215 aa23.07■■□□□ 1.28
TNFRSF1A-205ENST00000534885 PANK2Q9BZ23 570 aa23.07■■□□□ 1.28
TNFRSF1A-205ENST00000534885 HOMER2Q9NSB8 354 aa23.07■■□□□ 1.28
TNFRSF1A-205ENST00000534885 ADAMTS5Q9UNA0 930 aa23.07■■□□□ 1.28
TNFRSF1A-205ENST00000534885 FDX1P10109 184 aa23.06■■□□□ 1.28
TNFRSF1A-205ENST00000534885 PRPHP41219 470 aa23.06■■□□□ 1.28
TNFRSF1A-205ENST00000534885 PPIL2Q13356 520 aa23.06■■□□□ 1.28
TNFRSF1A-205ENST00000534885 DTHD1Q6ZMT9 781 aa23.06■■□□□ 1.28
TNFRSF1A-205ENST00000534885 SPDYE16A6NNV3 312 aaPredicted RBP23.05■■□□□ 1.28
TNFRSF1A-205ENST00000534885 CXCL11O14625 94 aa23.05■■□□□ 1.28
TNFRSF1A-205ENST00000534885 ARHGAP4P98171 946 aa23.05■■□□□ 1.28
TNFRSF1A-205ENST00000534885 MUM1L1Q5H9M0 696 aa23.05■■□□□ 1.28
TNFRSF1A-205ENST00000534885 PDILTQ8N807 584 aa23.05■■□□□ 1.28
TNFRSF1A-205ENST00000534885 SDF4Q9BRK5 362 aa23.05■■□□□ 1.28
TNFRSF1A-205ENST00000534885 FUCA2Q9BTY2 467 aa23.05■■□□□ 1.28
TNFRSF1A-205ENST00000534885 KCNH4Q9UQ05 1017 aa23.05■■□□□ 1.28
TNFRSF1A-205ENST00000534885 A0A087X0B3 334 aa23.05■■□□□ 1.28
TNFRSF1A-205ENST00000534885 POLR2DO15514 142 aaKnown RBP23.05■■□□□ 1.28
TNFRSF1A-205ENST00000534885 GJA5P36382 358 aa23.05■■□□□ 1.28
TNFRSF1A-205ENST00000534885 SREBF1P36956 1147 aa23.05■■□□□ 1.28
TNFRSF1A-205ENST00000534885 LONRF3Q496Y0 759 aa23.05■■□□□ 1.28
TNFRSF1A-205ENST00000534885 ERCC4Q92889 916 aaPredicted RBP23.05■■□□□ 1.28
TNFRSF1A-205ENST00000534885 DDX25Q9UHL0 483 aaKnown RBP23.05■■□□□ 1.28
TNFRSF1A-205ENST00000534885 CDC25AP30304 524 aa23.04■■□□□ 1.28
TNFRSF1A-205ENST00000534885 LONP1P36776 959 aaKnown RBP23.04■■□□□ 1.28
TNFRSF1A-205ENST00000534885 USP11P51784 963 aa23.04■■□□□ 1.28
TNFRSF1A-205ENST00000534885 CALCRLQ16602 461 aa23.04■■□□□ 1.28
TNFRSF1A-205ENST00000534885 TEX2Q8IWB9 1127 aa23.04■■□□□ 1.28
TNFRSF1A-205ENST00000534885 MTMR9Q96QG7 549 aa23.04■■□□□ 1.28
TNFRSF1A-205ENST00000534885 ZNF214Q9UL59 606 aaPredicted RBP23.04■■□□□ 1.28
TNFRSF1A-205ENST00000534885 RIPK3Q9Y572 518 aa23.04■■□□□ 1.28
TNFRSF1A-205ENST00000534885 CTAGE5O15320 804 aa23.04■■□□□ 1.28
TNFRSF1A-205ENST00000534885 GCFC2P16383 781 aaKnown RBP23.04■■□□□ 1.28
TNFRSF1A-205ENST00000534885 TMEM132BQ14DG7 1078 aa23.04■■□□□ 1.28
TNFRSF1A-205ENST00000534885 PROCA1Q8NCQ7 364 aaPredicted RBP23.04■■□□□ 1.28
TNFRSF1A-205ENST00000534885 TIGD1Q96MW7 591 aa23.04■■□□□ 1.28
TNFRSF1A-205ENST00000534885 TSPY26PQ9H489 355 aa23.04■■□□□ 1.28
TNFRSF1A-205ENST00000534885 HOXC10Q9NYD6 342 aa23.04■■□□□ 1.28
TNFRSF1A-205ENST00000534885 RBBP6Q7Z6E9 1792 aaKnown RBP23.04■■□□□ 1.28
TNFRSF1A-205ENST00000534885 HSD17B4P51659 736 aa23.03■■□□□ 1.28
TNFRSF1A-205ENST00000534885 SLC10A4Q96EP9 437 aa23.03■■□□□ 1.28
TNFRSF1A-205ENST00000534885 MYPNQ86TC9 1320 aa23.02■■□□□ 1.28
TNFRSF1A-205ENST00000534885 PP2D1A8MPX8 630 aa23.02■■□□□ 1.28
TNFRSF1A-205ENST00000534885 TRERF1Q96PN7 1200 aa23.02■■□□□ 1.28
TNFRSF1A-205ENST00000534885 GBA2Q9HCG7 927 aaPredicted RBP23.02■■□□□ 1.28
TNFRSF1A-205ENST00000534885 CELF2O95319 508 aaKnown RBP23.02■■□□□ 1.28
TNFRSF1A-205ENST00000534885 TXKP42681 527 aa23.02■■□□□ 1.28
TNFRSF1A-205ENST00000534885 MOGSQ13724 837 aa23.02■■□□□ 1.28
TNFRSF1A-205ENST00000534885 SNRNP48Q6IEG0 339 aaKnown RBP23.02■■□□□ 1.28
TNFRSF1A-205ENST00000534885 POTEEQ6S8J3 1075 aa23.02■■□□□ 1.28
TNFRSF1A-205ENST00000534885 KRBA2Q6ZNG9 492 aa23.02■■□□□ 1.28
TNFRSF1A-205ENST00000534885 COL20A1Q9P218 1284 aa23.02■■□□□ 1.28
TNFRSF1A-205ENST00000534885 CYP3A7-CYP3A51PA0A087WV96 503 aa23.01■■□□□ 1.27
TNFRSF1A-205ENST00000534885 CYP3A7P24462 503 aa23.01■■□□□ 1.27
TNFRSF1A-205ENST00000534885 HOXA7P31268 230 aaPredicted RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 221.5 ms