RNA–Protein interactions for RNA: ENST00000534557.1

VPS51-215, Transcript of VPS51, GARP complex subunit, humanhuman

APPRIS ALT2 TSL 3

Gene VPS51, Length 854 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-215ENST00000534557 WDR11Q9BZH6 1224 aa21.44■■□□□ 1.02
VPS51-215ENST00000534557 GPHNQ9NQX3 736 aaPredicted RBP21.44■■□□□ 1.02
VPS51-215ENST00000534557 ZSWIM5Q9P217 1185 aa21.44■■□□□ 1.02
VPS51-215ENST00000534557 LAMA3Q16787 3333 aa21.44■■□□□ 1.02
VPS51-215ENST00000534557 MFSD5Q6N075 450 aa21.43■■□□□ 1.02
VPS51-215ENST00000534557 CXCL17Q6UXB2 119 aa21.43■■□□□ 1.02
VPS51-215ENST00000534557 RGS22Q8NE09 1264 aa21.43■■□□□ 1.02
VPS51-215ENST00000534557 PDGFCQ9NRA1 345 aa21.43■■□□□ 1.02
VPS51-215ENST00000534557 RAD50Q92878 1312 aa21.43■■□□□ 1.02
VPS51-215ENST00000534557 PARP1P09874 1014 aaKnown RBP21.42■■□□□ 1.02
VPS51-215ENST00000534557 GOLGA8HP0CJ92 632 aa21.42■■□□□ 1.02
VPS51-215ENST00000534557 ITGB8P26012 769 aa21.42■■□□□ 1.02
VPS51-215ENST00000534557 CPT1AP50416 773 aa21.42■■□□□ 1.02
VPS51-215ENST00000534557 RPS6P62753 249 aaKnown RBP21.42■■□□□ 1.02
VPS51-215ENST00000534557 IRX5P78411 483 aaPredicted RBP21.42■■□□□ 1.02
VPS51-215ENST00000534557 ITGA7Q13683 1181 aa21.42■■□□□ 1.02
VPS51-215ENST00000534557 USH1GQ495M9 461 aa21.42■■□□□ 1.02
VPS51-215ENST00000534557 DUSP28Q4G0W2 176 aa21.42■■□□□ 1.02
VPS51-215ENST00000534557 MCF2L2Q86YR7 1114 aa21.42■■□□□ 1.02
VPS51-215ENST00000534557 UBA5Q9GZZ9 404 aa21.42■■□□□ 1.02
VPS51-215ENST00000534557 POLR3EQ9NVU0 708 aa21.42■■□□□ 1.02
VPS51-215ENST00000534557 TBX21Q9UL17 535 aa21.42■■□□□ 1.02
VPS51-215ENST00000534557 NKRFO15226 690 aaKnown RBP eCLIP21.41■■□□□ 1.02
VPS51-215ENST00000534557 IFIT1BQ5T764 474 aaKnown RBP21.41■■□□□ 1.02
VPS51-215ENST00000534557 CLEC4DQ8WXI8 215 aa21.41■■□□□ 1.02
VPS51-215ENST00000534557 PURBQ96QR8 312 aaKnown RBP21.41■■□□□ 1.02
VPS51-215ENST00000534557 U3KPZ7 1027 aaPredicted RBP21.41■■□□□ 1.02
VPS51-215ENST00000534557 ASTN1O14525 1302 aa21.4■■□□□ 1.02
VPS51-215ENST00000534557 TNKSO95271 1327 aa21.4■■□□□ 1.02
VPS51-215ENST00000534557 ABCB11O95342 1321 aa21.4■■□□□ 1.02
VPS51-215ENST00000534557 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.4■■□□□ 1.02
VPS51-215ENST00000534557 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.4■■□□□ 1.02
VPS51-215ENST00000534557 CTAGE5O15320 804 aa21.4■■□□□ 1.02
VPS51-215ENST00000534557 TTC22Q5TAA0 569 aa21.4■■□□□ 1.02
VPS51-215ENST00000534557 FAM126BQ8IXS8 530 aa21.4■■□□□ 1.02
VPS51-215ENST00000534557 ADGRF4Q8IZF3 695 aa21.4■■□□□ 1.02
VPS51-215ENST00000534557 ENAHQ8N8S7 591 aaPredicted RBP21.4■■□□□ 1.02
VPS51-215ENST00000534557 SCFD2Q8WU76 684 aa21.4■■□□□ 1.02
VPS51-215ENST00000534557 FAM161BQ96MY7 647 aa21.4■■□□□ 1.02
VPS51-215ENST00000534557 MRPL11Q9Y3B7 192 aaKnown RBP21.4■■□□□ 1.02
VPS51-215ENST00000534557 ERICH2A1L162 156 aa21.39■■□□□ 1.01
VPS51-215ENST00000534557 KPNA6O60684 536 aa21.39■■□□□ 1.01
VPS51-215ENST00000534557 TRAF1Q13077 416 aa21.39■■□□□ 1.01
VPS51-215ENST00000534557 PPP2R5BQ15173 497 aa21.39■■□□□ 1.01
VPS51-215ENST00000534557 CDC37Q16543 378 aaPredicted RBP21.39■■□□□ 1.01
VPS51-215ENST00000534557 SLC30A10Q6XR72 485 aa21.39■■□□□ 1.01
VPS51-215ENST00000534557 MTIF3Q9H2K0 278 aaKnown RBP21.39■■□□□ 1.01
VPS51-215ENST00000534557 VAT1LQ9HCJ6 419 aa21.39■■□□□ 1.01
VPS51-215ENST00000534557 SUPT20HL2P0C7V6 817 aa21.38■■□□□ 1.01
VPS51-215ENST00000534557 SART3Q15020 963 aaKnown RBP21.38■■□□□ 1.01
VPS51-215ENST00000534557 FBXO11Q86XK2 927 aa21.38■■□□□ 1.01
VPS51-215ENST00000534557 SLC43A3Q8NBI5 491 aa21.38■■□□□ 1.01
VPS51-215ENST00000534557 OR6J1Q8NGC5 347 aa21.38■■□□□ 1.01
VPS51-215ENST00000534557 PPP1R12CQ9BZL4 782 aa21.38■■□□□ 1.01
VPS51-215ENST00000534557 SEMA6BQ9H3T3 888 aa21.38■■□□□ 1.01
VPS51-215ENST00000534557 DDX49Q9Y6V7 483 aaKnown RBP21.38■■□□□ 1.01
VPS51-215ENST00000534557 MCM3APO60318 1980 aa21.37■■□□□ 1.01
VPS51-215ENST00000534557 TMEM265A0A087WTH1 108 aa21.37■■□□□ 1.01
VPS51-215ENST00000534557 RBM47A0AV96 593 aaKnown RBP21.37■■□□□ 1.01
VPS51-215ENST00000534557 CD4P01730 458 aa21.37■■□□□ 1.01
VPS51-215ENST00000534557 TTLL4Q14679 1199 aa21.37■■□□□ 1.01
VPS51-215ENST00000534557 PSRC1Q6PGN9 363 aaPredicted RBP21.37■■□□□ 1.01
VPS51-215ENST00000534557 RALYLQ86SE5 291 aaKnown RBP21.37■■□□□ 1.01
VPS51-215ENST00000534557 NSUN6Q8TEA1 469 aaKnown RBP21.37■■□□□ 1.01
VPS51-215ENST00000534557 HIPK3Q9H422 1215 aa21.37■■□□□ 1.01
VPS51-215ENST00000534557 LTBP2Q14767 1821 aa21.36■■□□□ 1.01
VPS51-215ENST00000534557 MYL3P08590 195 aa21.36■■□□□ 1.01
VPS51-215ENST00000534557 TXNP10599 105 aaKnown RBP21.36■■□□□ 1.01
VPS51-215ENST00000534557 EPHB4P54760 987 aa21.36■■□□□ 1.01
VPS51-215ENST00000534557 IWS1Q96ST2 819 aa21.36■■□□□ 1.01
VPS51-215ENST00000534557 MTG1Q9BT17 334 aaPredicted RBP21.36■■□□□ 1.01
VPS51-215ENST00000534557 CSF2RAP15509 400 aa21.35■■□□□ 1.01
VPS51-215ENST00000534557 EDNRBP24530 442 aa21.35■■□□□ 1.01
VPS51-215ENST00000534557 PDE4AP27815 886 aa21.35■■□□□ 1.01
VPS51-215ENST00000534557 STXBP2Q15833 593 aa21.35■■□□□ 1.01
VPS51-215ENST00000534557 RPUSD2Q8IZ73 545 aaKnown RBP21.35■■□□□ 1.01
VPS51-215ENST00000534557 AMNQ9BXJ7 453 aa21.35■■□□□ 1.01
VPS51-215ENST00000534557 CPVLQ9H3G5 476 aa21.35■■□□□ 1.01
VPS51-215ENST00000534557 KLRF2D3W0D1 207 aa21.34■■□□□ 1.01
VPS51-215ENST00000534557 GSPT1P15170 499 aaKnown RBP21.34■■□□□ 1.01
VPS51-215ENST00000534557 CHMLP26374 656 aa21.34■■□□□ 1.01
VPS51-215ENST00000534557 QRICH1Q2TAL8 776 aa21.34■■□□□ 1.01
VPS51-215ENST00000534557 ARHGEF16Q5VV41 709 aa21.34■■□□□ 1.01
VPS51-215ENST00000534557 GUCD1Q96NT3 240 aa21.34■■□□□ 1.01
VPS51-215ENST00000534557 RMDN3Q96TC7 470 aa21.34■■□□□ 1.01
VPS51-215ENST00000534557 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.34■■□□□ 1.016e-6■■□□□ 12
VPS51-215ENST00000534557 IL23AQ9NPF7 189 aa21.34■■□□□ 1.01
VPS51-215ENST00000534557 IFIT3O14879 490 aaKnown RBP21.33■■□□□ 1.01
VPS51-215ENST00000534557 FGBP02675 491 aa21.33■■□□□ 1.01
VPS51-215ENST00000534557 CYP2C18P33260 490 aa21.33■■□□□ 1.01
VPS51-215ENST00000534557 PSMC6P62333 389 aa21.33■■□□□ 1.01
VPS51-215ENST00000534557 TMEM240Q5SV17 173 aa21.33■■□□□ 1.01
VPS51-215ENST00000534557 NCOA7Q8NI08 942 aa21.33■■□□□ 1.01
VPS51-215ENST00000534557 CDX2Q99626 313 aaPredicted RBP21.33■■□□□ 1.01
VPS51-215ENST00000534557 TRPV6Q9H1D0 765 aa21.33■■□□□ 1.01
VPS51-215ENST00000534557 JMJD4Q9H9V9 463 aa21.33■■□□□ 1.01
VPS51-215ENST00000534557 MAP3K20Q9NYL2 800 aaKnown RBP21.33■■□□□ 1.01
VPS51-215ENST00000534557 DLL1O00548 723 aa21.32■■□□□ 1
VPS51-215ENST00000534557 B4GALT4O60513 344 aa21.32■■□□□ 1
VPS51-215ENST00000534557 CFBP00751 764 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms