RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-213ENST00000534532 HS1BP3Q53T59 392 aa17.27■□□□□ 0.36
NCAPD3-213ENST00000534532 CROCCP2Q86T23 111 aa17.27■□□□□ 0.36
NCAPD3-213ENST00000534532 DAAM2Q86T65 1068 aa17.27■□□□□ 0.36
NCAPD3-213ENST00000534532 GIMAP7Q8NHV1 300 aa17.27■□□□□ 0.36
NCAPD3-213ENST00000534532 GPR101Q96P66 508 aaPredicted RBP17.27■□□□□ 0.36
NCAPD3-213ENST00000534532 FOXP1Q9H334 677 aaPredicted RBP17.27■□□□□ 0.36
NCAPD3-213ENST00000534532 CBX8Q9HC52 389 aa17.27■□□□□ 0.36
NCAPD3-213ENST00000534532 RPAP1Q9BWH6 1393 aaPredicted RBP17.27■□□□□ 0.36
NCAPD3-213ENST00000534532 CDC42BPGQ6DT37 1551 aa17.27■□□□□ 0.36
NCAPD3-213ENST00000534532 PLEKHG2Q9H7P9 1386 aa17.27■□□□□ 0.36
NCAPD3-213ENST00000534532 CDK12Q9NYV4 1490 aaPredicted RBP17.27■□□□□ 0.36
NCAPD3-213ENST00000534532 KCNJ18B7U540 433 aa17.27■□□□□ 0.35
NCAPD3-213ENST00000534532 ARHGAP6O43182 974 aa17.27■□□□□ 0.35
NCAPD3-213ENST00000534532 KCNJ12Q14500 433 aa17.27■□□□□ 0.35
NCAPD3-213ENST00000534532 KRT222Q8N1A0 295 aa17.27■□□□□ 0.35
NCAPD3-213ENST00000534532 USP28Q96RU2 1077 aa17.27■□□□□ 0.35
NCAPD3-213ENST00000534532 TYW1BQ6NUM6 668 aa17.27■□□□□ 0.35
NCAPD3-213ENST00000534532 GJA10Q969M2 543 aa17.27■□□□□ 0.35
NCAPD3-213ENST00000534532 DYNLL2Q96FJ2 89 aa17.27■□□□□ 0.35
NCAPD3-213ENST00000534532 CALCOCO1Q9P1Z2 691 aa17.27■□□□□ 0.35
NCAPD3-213ENST00000534532 AMFRQ9UKV5 643 aa17.27■□□□□ 0.35
NCAPD3-213ENST00000534532 ARHGAP31Q2M1Z3 1444 aa17.27■□□□□ 0.35
NCAPD3-213ENST00000534532 MORC3Q14149 939 aa17.26■□□□□ 0.35
NCAPD3-213ENST00000534532 FBXO18Q8NFZ0 1043 aa17.26■□□□□ 0.35
NCAPD3-213ENST00000534532 CCDC110Q8TBZ0 833 aa17.26■□□□□ 0.35
NCAPD3-213ENST00000534532 CCDC51Q96ER9 411 aa17.26■□□□□ 0.35
NCAPD3-213ENST00000534532 WRNIP1Q96S55 665 aa17.26■□□□□ 0.35
NCAPD3-213ENST00000534532 RNF8O76064 485 aa17.26■□□□□ 0.35
NCAPD3-213ENST00000534532 CDC37Q16543 378 aaPredicted RBP17.26■□□□□ 0.35
NCAPD3-213ENST00000534532 IFIH1Q9BYX4 1025 aaKnown RBP17.26■□□□□ 0.35
NCAPD3-213ENST00000534532 SNX25Q9H3E2 840 aa17.26■□□□□ 0.35
NCAPD3-213ENST00000534532 SLC39A2Q9NP94 309 aa17.26■□□□□ 0.35
NCAPD3-213ENST00000534532 SAMD15Q9P1V8 674 aa17.26■□□□□ 0.35
NCAPD3-213ENST00000534532 PFDN6O15212 129 aa17.26■□□□□ 0.35
NCAPD3-213ENST00000534532 GH2P01242 217 aa17.26■□□□□ 0.35
NCAPD3-213ENST00000534532 XRCC6P12956 609 aaKnown RBP eCLIP17.26■□□□□ 0.35
NCAPD3-213ENST00000534532 RSAD2Q8WXG1 361 aa17.26■□□□□ 0.35
NCAPD3-213ENST00000534532 ACCSQ96QU6 501 aa17.26■□□□□ 0.35
NCAPD3-213ENST00000534532 ZHX2Q9Y6X8 837 aa17.26■□□□□ 0.35
NCAPD3-213ENST00000534532 SPDYE16A6NNV3 312 aaPredicted RBP17.26■□□□□ 0.35
NCAPD3-213ENST00000534532 SPDYE2Q495Y8 402 aa17.26■□□□□ 0.35
NCAPD3-213ENST00000534532 IFT20Q8IY31 132 aa17.26■□□□□ 0.35
NCAPD3-213ENST00000534532 LARP4BQ92615 738 aaKnown RBP17.26■□□□□ 0.35
NCAPD3-213ENST00000534532 DISC1Q9NRI5 854 aa17.26■□□□□ 0.35
NCAPD3-213ENST00000534532 KIAA1468Q9P260 1216 aa17.26■□□□□ 0.35
NCAPD3-213ENST00000534532 RPN1P04843 607 aaKnown RBP17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 ERCC6LQ2NKX8 1250 aa17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 PI16Q6UXB8 463 aa17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 MRRFQ96E11 262 aaKnown RBP17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 ZBED2Q9BTP6 218 aa17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 PTK2Q05397 1052 aa17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 PPP2R3AQ06190 1150 aa17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 PDXDC2PQ6P474 469 aa17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 BBS5Q8N3I7 341 aa17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 CD209Q9NNX6 404 aa17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 USP17L5A8MUK1 530 aa17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 USP17L2Q6R6M4 530 aa17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 RNF207Q6ZRF8 634 aa17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 GPIHBP1Q8IV16 184 aa17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 VPS52Q8N1B4 723 aa17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 TBCKQ8TEA7 893 aa17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 TRIM31Q9BZY9 425 aa17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 GNAT1P11488 350 aa17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 ITKQ08881 620 aa17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 BSPRYQ5W0U4 402 aa17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 NT5C1BQ96P26 610 aa17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 PRDM15P57071 1507 aaPredicted RBP17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 DTNBO60941 627 aa17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 SASH1O94885 1247 aa17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 TBC1D9BQ66K14 1250 aa17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 SYMPKQ92797 1274 aaKnown RBP17.25■□□□□ 0.35
NCAPD3-213ENST00000534532 HSPA1LP34931 641 aa17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 CFAP221Q4G0U5 840 aa17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 TDRD3Q9H7E2 651 aaKnown RBP17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 GRIN3BO60391 1043 aa17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 XPAP23025 273 aaPredicted RBP17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 ZNF75DP51815 510 aa17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 KRBA2Q6ZNG9 492 aa17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 OR8K1Q8NGG5 319 aa17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 BRIP1Q9BX63 1249 aa17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 MINPP1Q9UNW1 487 aa17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 PNMA6FA0A0J9YX94 578 aa17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 CYP21A2P08686 494 aa17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 ABCB4P21439 1286 aa17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 NSFP46459 744 aaKnown RBP17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 MFAP3P55082 362 aa17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 PLCB4Q15147 1175 aa17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 DCAF4Q8WV16 495 aa17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 TMEM206Q9H813 350 aa17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 EIF2AK2P19525 551 aaKnown RBP17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 ELF1P32519 619 aa17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 MTERF2Q49AM1 385 aa17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 SLF1Q9BQI6 1058 aa17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 LSG1Q9H089 658 aaKnown RBP17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 PUS7LQ9H0K6 701 aaKnown RBP17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 V9GYY5 206 aaPredicted RBP17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 CHD1O14646 1710 aa17.24■□□□□ 0.35
NCAPD3-213ENST00000534532 ATP8B3O60423 1300 aa17.23■□□□□ 0.35
NCAPD3-213ENST00000534532 BRD1O95696 1058 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms