RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 LRP10Q7Z4F1 713 aa6.36□□□□□ -1.39
ECHDC1-223ENST00000534442 C12orf40Q86WS4 652 aa6.36□□□□□ -1.39
ECHDC1-223ENST00000534442 TDHQ8IZJ6 230 aa6.36□□□□□ -1.39
ECHDC1-223ENST00000534442 LINC00116Q8NCU8 138 aa6.36□□□□□ -1.39
ECHDC1-223ENST00000534442 UBASH3BQ8TF42 649 aa6.36□□□□□ -1.39
ECHDC1-223ENST00000534442 MYLIPQ8WY64 445 aa6.36□□□□□ -1.39
ECHDC1-223ENST00000534442 ZNF333Q96JL9 665 aa6.36□□□□□ -1.39
ECHDC1-223ENST00000534442 DEPDC7Q96QD5 511 aa6.36□□□□□ -1.39
ECHDC1-223ENST00000534442 ST7Q9NRC1 585 aa6.36□□□□□ -1.39
ECHDC1-223ENST00000534442 REV1Q9UBZ9 1251 aa6.36□□□□□ -1.39
ECHDC1-223ENST00000534442 CSADQ9Y600 493 aa6.36□□□□□ -1.39
ECHDC1-223ENST00000534442 TACC3Q9Y6A5 838 aa6.36□□□□□ -1.39
ECHDC1-223ENST00000534442 MRPL42Q9Y6G3 142 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-223ENST00000534442 NAV2Q8IVL1 2488 aa6.36□□□□□ -1.39
ECHDC1-223ENST00000534442 ANKRD30AQ9BXX3 1397 aa6.35□□□□□ -1.39
ECHDC1-223ENST00000534442 A0A1W2PQH9 124 aa6.35□□□□□ -1.39
ECHDC1-223ENST00000534442 U2SURPO15042 1029 aaKnown RBP6.35□□□□□ -1.39
ECHDC1-223ENST00000534442 DDR1Q08345 913 aa6.35□□□□□ -1.39
ECHDC1-223ENST00000534442 DDR2Q16832 855 aa6.35□□□□□ -1.39
ECHDC1-223ENST00000534442 TRAPPC3LQ5T215 181 aa6.35□□□□□ -1.39
ECHDC1-223ENST00000534442 ZNF662Q6ZS27 426 aa6.35□□□□□ -1.39
ECHDC1-223ENST00000534442 DTWD1Q8N5C7 304 aa6.35□□□□□ -1.39
ECHDC1-223ENST00000534442 C19orf47Q8N9M1 422 aaKnown RBP6.35□□□□□ -1.39
ECHDC1-223ENST00000534442 USP38Q8NB14 1042 aa6.35□□□□□ -1.39
ECHDC1-223ENST00000534442 TMEM40Q8WWA1 233 aa6.35□□□□□ -1.39
ECHDC1-223ENST00000534442 ELMO3Q96BJ8 720 aa6.35□□□□□ -1.39
ECHDC1-223ENST00000534442 PUS7Q96PZ0 661 aaKnown RBP6.35□□□□□ -1.39
ECHDC1-223ENST00000534442 CCDC113Q9H0I3 377 aa6.35□□□□□ -1.39
ECHDC1-223ENST00000534442 PTPN22Q9Y2R2 807 aa6.35□□□□□ -1.39
ECHDC1-223ENST00000534442 POLR3AO14802 1390 aaPredicted RBP6.34□□□□□ -1.39
ECHDC1-223ENST00000534442 TPRP12270 2363 aaKnown RBP6.34□□□□□ -1.39
ECHDC1-223ENST00000534442 A0A0A0MRY4 1105 aa6.34□□□□□ -1.39
ECHDC1-223ENST00000534442 SLC22A31A6NKX4 558 aa6.34□□□□□ -1.39
ECHDC1-223ENST00000534442 WISP1O95388 367 aa6.34□□□□□ -1.39
ECHDC1-223ENST00000534442 ACRP10323 421 aa6.34□□□□□ -1.39
ECHDC1-223ENST00000534442 PLCG1P19174 1290 aa6.34□□□□□ -1.39
ECHDC1-223ENST00000534442 LRRFIP1Q32MZ4 808 aaKnown RBP6.34□□□□□ -1.39
ECHDC1-223ENST00000534442 TMEM201Q5SNT2 666 aa6.34□□□□□ -1.39
ECHDC1-223ENST00000534442 TTC6Q86TZ1 520 aa6.34□□□□□ -1.39
ECHDC1-223ENST00000534442 FBXO11Q86XK2 927 aa6.34□□□□□ -1.39
ECHDC1-223ENST00000534442 LURAP1LQ8IV03 231 aa6.34□□□□□ -1.39
ECHDC1-223ENST00000534442 ATG4CQ96DT6 458 aa6.34□□□□□ -1.39
ECHDC1-223ENST00000534442 TRIM11Q96F44 468 aa6.34□□□□□ -1.39
ECHDC1-223ENST00000534442 RNPC3Q96LT9 517 aaKnown RBP6.34□□□□□ -1.39
ECHDC1-223ENST00000534442 PPP1R9AQ9ULJ8 1098 aa6.34□□□□□ -1.39
ECHDC1-223ENST00000534442 HIF3AQ9Y2N7 669 aa6.34□□□□□ -1.39
ECHDC1-223ENST00000534442 MON2Q7Z3U7 1717 aa6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 EIF3AQ14152 1382 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 PRAMEF27A3QJZ7 478 aa6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 SLFN14P0C7P3 912 aa6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 FOSL2P15408 326 aa6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 GUCY2CP25092 1073 aa6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 GRK4P32298 578 aa6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 TCEAL1Q15170 157 aa6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 PPP2R5EQ16537 467 aa6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 EXOSC6Q5RKV6 272 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 HP1BP3Q5SSJ5 553 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 EGFLAMQ63HQ2 1017 aa6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 LARP1BQ659C4 914 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 ZNF385CQ66K41 422 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 OVOS1Q6IE37 1185 aa6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 LINC00114Q6XXX2 140 aa6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 FMR1NBQ8N0W7 255 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 TAB3Q8N5C8 712 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 SHISA4Q96DD7 197 aa6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 ASB2Q96Q27 587 aa6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 PRAM1Q96QH2 718 aa6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 TM9SF2Q99805 663 aa6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 TMPRSS13Q9BYE2 586 aa6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 GMIPQ9P107 970 aa6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 MAPK8IP1Q9UQF2 711 aa6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 LAMB2P55268 1798 aa6.33□□□□□ -1.4
ECHDC1-223ENST00000534442 B2RBV5 119 aa6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 CHURC1-FNTBB4DL54 471 aa6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 SMIM22K7EJ46 135 aa6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 TMPRSS2O15393 492 aa6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 NME1P15531 152 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 NTF4P34130 210 aa6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 EPS15P42566 896 aa6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 ERVK-24P63145 666 aa6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 ID3Q02535 119 aa6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 ZYXQ15942 572 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 FXNQ16595 210 aa6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 PPM1JQ5JR12 505 aa6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 LCE2AQ5TA79 106 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 CDCP2Q5VXM1 449 aa6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 KIAA1211Q6ZU35 1233 aa6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 USP50Q70EL3 339 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 ZSCAN1Q8NBB4 408 aa6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 ATXN2LQ8WWM7 1075 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 ACSF2Q96CM8 615 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 FBXL18Q96ME1 805 aa6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 WNT10AQ9GZT5 417 aa6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 CNNM2Q9H8M5 875 aa6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 RAD18Q9NS91 495 aa6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 CRIM1Q9NZV1 1036 aa6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 ADAM30Q9UKF2 790 aa6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 SMG6Q86US8 1419 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 REV3LO60673 3130 aa6.32□□□□□ -1.4
ECHDC1-223ENST00000534442 MEGF11A6BM72 1044 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms