RNA–Protein interactions for RNA: ENST00000534276.5

CHRDL2-209, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-209ENST00000534276 KATNBL1Q9H079 304 aa14.3□□□□□ -0.12
CHRDL2-209ENST00000534276 TCP11L1Q9NUJ3 509 aa14.3□□□□□ -0.12
CHRDL2-209ENST00000534276 MYADML2A6NDP7 307 aa14.29□□□□□ -0.12
CHRDL2-209ENST00000534276 SOWAHBA6NEL2 793 aa14.29□□□□□ -0.12
CHRDL2-209ENST00000534276 MOXD2PA6NHM9 499 aa14.29□□□□□ -0.12
CHRDL2-209ENST00000534276 PQBP1O60828 265 aaKnown RBP14.29□□□□□ -0.12
CHRDL2-209ENST00000534276 CLTBP09497 229 aa14.29□□□□□ -0.12
CHRDL2-209ENST00000534276 CST5P28325 142 aaPredicted RBP14.29□□□□□ -0.12
CHRDL2-209ENST00000534276 IRX5P78411 483 aaPredicted RBP14.29□□□□□ -0.12
CHRDL2-209ENST00000534276 KCNA10Q16322 511 aa14.29□□□□□ -0.12
CHRDL2-209ENST00000534276 TTBK2Q6IQ55 1244 aa14.29□□□□□ -0.12
CHRDL2-209ENST00000534276 BTNL9Q6UXG8 535 aa14.29□□□□□ -0.12
CHRDL2-209ENST00000534276 Q6ZUG5 572 aa14.29□□□□□ -0.12
CHRDL2-209ENST00000534276 NUP133Q8WUM0 1156 aa14.29□□□□□ -0.12
CHRDL2-209ENST00000534276 ZNF274Q96GC6 653 aaPredicted RBP14.29□□□□□ -0.12
CHRDL2-209ENST00000534276 TMEM87BQ96K49 555 aa14.29□□□□□ -0.12
CHRDL2-209ENST00000534276 UPF3AQ9H1J1 476 aaKnown RBP14.29□□□□□ -0.12
CHRDL2-209ENST00000534276 STARD7Q9NQZ5 370 aa14.29□□□□□ -0.12
CHRDL2-209ENST00000534276 MTMR10Q9NXD2 777 aa14.29□□□□□ -0.12
CHRDL2-209ENST00000534276 KIAA0355O15063 1070 aa14.28□□□□□ -0.12
CHRDL2-209ENST00000534276 C6orf222P0C671 652 aaPredicted RBP14.28□□□□□ -0.12
CHRDL2-209ENST00000534276 GJA9P57773 515 aa14.28□□□□□ -0.12
CHRDL2-209ENST00000534276 SHHQ15465 462 aa14.28□□□□□ -0.12
CHRDL2-209ENST00000534276 MUM1L1Q5H9M0 696 aa14.28□□□□□ -0.12
CHRDL2-209ENST00000534276 MFSD6Q6ZSS7 791 aa14.28□□□□□ -0.12
CHRDL2-209ENST00000534276 ANKRD33Q7Z3H0 272 aa14.28□□□□□ -0.12
CHRDL2-209ENST00000534276 PCSK9Q8NBP7 692 aaKnown RBP14.28□□□□□ -0.12
CHRDL2-209ENST00000534276 TOX2Q96NM4 488 aa14.28□□□□□ -0.12
CHRDL2-209ENST00000534276 RANBP17Q9H2T7 1088 aaKnown RBP14.28□□□□□ -0.12
CHRDL2-209ENST00000534276 SPC25Q9HBM1 224 aa14.28□□□□□ -0.12
CHRDL2-209ENST00000534276 CYP39A1Q9NYL5 469 aa14.28□□□□□ -0.12
CHRDL2-209ENST00000534276 CCPG1Q9ULG6 757 aa14.28□□□□□ -0.12
CHRDL2-209ENST00000534276 TPCN1Q9ULQ1 816 aa14.28□□□□□ -0.12
CHRDL2-209ENST00000534276 ASB14A6NK59 587 aa14.27□□□□□ -0.12
CHRDL2-209ENST00000534276 ICAM1P05362 532 aa14.27□□□□□ -0.12
CHRDL2-209ENST00000534276 ITGB8P26012 769 aa14.27□□□□□ -0.12
CHRDL2-209ENST00000534276 SLC16A2P36021 539 aa14.27□□□□□ -0.12
CHRDL2-209ENST00000534276 FGD1P98174 961 aa14.27□□□□□ -0.12
CHRDL2-209ENST00000534276 ME3Q16798 604 aa14.27□□□□□ -0.12
CHRDL2-209ENST00000534276 C9orf50Q5SZB4 431 aa14.27□□□□□ -0.12
CHRDL2-209ENST00000534276 SYDE2Q5VT97 1194 aa14.27□□□□□ -0.12
CHRDL2-209ENST00000534276 TBC1D10CQ8IV04 446 aa14.27□□□□□ -0.12
CHRDL2-209ENST00000534276 SPRYD3Q8NCJ5 442 aa14.27□□□□□ -0.12
CHRDL2-209ENST00000534276 GPCPD1Q9NPB8 672 aa14.27□□□□□ -0.12
CHRDL2-209ENST00000534276 ASTN1O14525 1302 aa14.27□□□□□ -0.13
CHRDL2-209ENST00000534276 ELP1O95163 1332 aa14.27□□□□□ -0.13
CHRDL2-209ENST00000534276 FRMPD2Q68DX3 1309 aaPredicted RBP14.27□□□□□ -0.13
CHRDL2-209ENST00000534276 LTBP2Q14767 1821 aa14.26□□□□□ -0.13
CHRDL2-209ENST00000534276 DCDC2CA8MYV0 355 aa14.26□□□□□ -0.13
CHRDL2-209ENST00000534276 CTAGE5O15320 804 aa14.26□□□□□ -0.13
CHRDL2-209ENST00000534276 PRC1O43663 620 aa14.26□□□□□ -0.13
CHRDL2-209ENST00000534276 ASGR1P07306 291 aa14.26□□□□□ -0.13
CHRDL2-209ENST00000534276 PDHBP11177 359 aa14.26□□□□□ -0.13
CHRDL2-209ENST00000534276 NKX3-2P78367 333 aa14.26□□□□□ -0.13
CHRDL2-209ENST00000534276 TNFAIP2Q03169 654 aa14.26□□□□□ -0.13
CHRDL2-209ENST00000534276 GNASQ5JWF2 1037 aa14.26□□□□□ -0.13
CHRDL2-209ENST00000534276 NSMFQ6X4W1 530 aa14.26□□□□□ -0.13
CHRDL2-209ENST00000534276 TMTC2Q8N394 836 aa14.26□□□□□ -0.13
CHRDL2-209ENST00000534276 GLT1D1Q96MS3 346 aa14.26□□□□□ -0.13
CHRDL2-209ENST00000534276 LLPHQ9BRT6 129 aaKnown RBP14.26□□□□□ -0.13
CHRDL2-209ENST00000534276 TMEM39AQ9NV64 488 aa14.26□□□□□ -0.13
CHRDL2-209ENST00000534276 MCM3APO60318 1980 aa14.26□□□□□ -0.13
CHRDL2-209ENST00000534276 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.25□□□□□ -0.13
CHRDL2-209ENST00000534276 PFKFB2O60825 505 aa14.25□□□□□ -0.13
CHRDL2-209ENST00000534276 RAG1P15918 1043 aa14.25□□□□□ -0.13
CHRDL2-209ENST00000534276 LIFRP42702 1097 aa14.25□□□□□ -0.13
CHRDL2-209ENST00000534276 FAAP100Q0VG06 881 aa14.25□□□□□ -0.13
CHRDL2-209ENST00000534276 FAM109BQ6ICB4 259 aaPredicted RBP14.25□□□□□ -0.13
CHRDL2-209ENST00000534276 NOL8Q76FK4 1167 aaKnown RBP14.25□□□□□ -0.13
CHRDL2-209ENST00000534276 BRF1Q92994 677 aa14.25□□□□□ -0.13
CHRDL2-209ENST00000534276 STXBP5LQ9Y2K9 1186 aa14.25□□□□□ -0.13
CHRDL2-209ENST00000534276 DDX49Q9Y6V7 483 aaKnown RBP14.25□□□□□ -0.13
CHRDL2-209ENST00000534276 SNHG28P0DPA3 235 aa14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 HOXD11P31277 338 aaPredicted RBP14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 CDK7P50613 346 aa14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 EPHB4P54760 987 aa14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 ZNF543Q08ER8 600 aa14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 COL9A3Q14050 684 aaPredicted RBP14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 SART3Q15020 963 aaKnown RBP14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 CLEC17AQ6ZS10 378 aa14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 ESR2Q92731 530 aa14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 GTF3C6Q969F1 213 aa14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 VTI1AQ96AJ9 217 aa14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 PURBQ96QR8 312 aaKnown RBP14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 TBX21Q9UL17 535 aa14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 SMC3Q9UQE7 1217 aa14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 GNEQ9Y223 722 aaKnown RBP14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 DNAH12Q6ZR08 3092 aa14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 NEDD4P46934 1319 aa14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 NFIBO00712 420 aa14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 DHX16O60231 1041 aaKnown RBP14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 SMPD1P17405 629 aa14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 RCAN1P53805 252 aa14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 ANTXR2P58335 489 aa14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 BEX3Q00994 111 aa14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 BAATQ14032 418 aaPredicted RBP14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 EEPD1Q7L9B9 569 aa14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 SGMS1Q86VZ5 419 aa14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 DGKHQ86XP1 1220 aa14.24□□□□□ -0.13
CHRDL2-209ENST00000534276 FBXO16Q8IX29 292 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms