RNA–Protein interactions for RNA: ENST00000534208.5

NDUFS3-212, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4 BASIC

Gene NDUFS3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-212ENST00000534208 DUSP28Q4G0W2 176 aa23.18■■□□□ 1.3
NDUFS3-212ENST00000534208 RNF207Q6ZRF8 634 aa23.18■■□□□ 1.3
NDUFS3-212ENST00000534208 CTNNA3Q9UI47 895 aa23.18■■□□□ 1.3
NDUFS3-212ENST00000534208 RBM47A0AV96 593 aaKnown RBP23.17■■□□□ 1.3
NDUFS3-212ENST00000534208 CD4P01730 458 aa23.17■■□□□ 1.3
NDUFS3-212ENST00000534208 IMMTQ16891 758 aaKnown RBP23.17■■□□□ 1.3
NDUFS3-212ENST00000534208 SLC30A10Q6XR72 485 aa23.17■■□□□ 1.3
NDUFS3-212ENST00000534208 KIAA1211Q6ZU35 1233 aa23.17■■□□□ 1.3
NDUFS3-212ENST00000534208 PNMA1Q8ND90 353 aa23.17■■□□□ 1.3
NDUFS3-212ENST00000534208 FAM161BQ96MY7 647 aa23.17■■□□□ 1.3
NDUFS3-212ENST00000534208 SEMA6BQ9H3T3 888 aa23.17■■□□□ 1.3
NDUFS3-212ENST00000534208 GOLGA8HP0CJ92 632 aa23.16■■□□□ 1.3
NDUFS3-212ENST00000534208 PTGS1P23219 599 aa23.16■■□□□ 1.3
NDUFS3-212ENST00000534208 CALML3P27482 149 aa23.16■■□□□ 1.3
NDUFS3-212ENST00000534208 RPS6P62753 249 aaKnown RBP23.16■■□□□ 1.3
NDUFS3-212ENST00000534208 PPIGQ13427 754 aaKnown RBP eCLIP23.16■■□□□ 1.34e-7■□□□□ 11.3
NDUFS3-212ENST00000534208 TMEM63BQ5T3F8 832 aa23.16■■□□□ 1.3
NDUFS3-212ENST00000534208 RGS22Q8NE09 1264 aa23.16■■□□□ 1.3
NDUFS3-212ENST00000534208 ZSCAN10Q96SZ4 725 aaPredicted RBP23.16■■□□□ 1.3
NDUFS3-212ENST00000534208 MAF1Q9H063 256 aa23.16■■□□□ 1.3
NDUFS3-212ENST00000534208 GRIN2DO15399 1336 aa23.15■■□□□ 1.3
NDUFS3-212ENST00000534208 B4E1Z4 1266 aa23.15■■□□□ 1.3
NDUFS3-212ENST00000534208 EDNRBP24530 442 aa23.15■■□□□ 1.3
NDUFS3-212ENST00000534208 IRX6P78412 446 aaPredicted RBP23.15■■□□□ 1.3
NDUFS3-212ENST00000534208 ITGA7Q13683 1181 aa23.15■■□□□ 1.3
NDUFS3-212ENST00000534208 ENAHQ8N8S7 591 aaPredicted RBP23.15■■□□□ 1.3
NDUFS3-212ENST00000534208 DNERQ8NFT8 737 aa23.15■■□□□ 1.3
NDUFS3-212ENST00000534208 MPHOSPH6Q99547 160 aaKnown RBP23.15■■□□□ 1.3
NDUFS3-212ENST00000534208 WDR11Q9BZH6 1224 aa23.15■■□□□ 1.3
NDUFS3-212ENST00000534208 KAT14Q9H8E8 782 aa23.15■■□□□ 1.3
NDUFS3-212ENST00000534208 TMEM265A0A087WTH1 108 aa23.14■■□□□ 1.29
NDUFS3-212ENST00000534208 C16orf59Q7L2K0 433 aa23.14■■□□□ 1.29
NDUFS3-212ENST00000534208 TMEM199Q8N511 208 aa23.14■■□□□ 1.29
NDUFS3-212ENST00000534208 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.14■■□□□ 1.292e-7■□□□□ 9.3
NDUFS3-212ENST00000534208 KRT23Q9C075 422 aa23.14■■□□□ 1.29
NDUFS3-212ENST00000534208 TTYH1Q9H313 450 aaPredicted RBP23.14■■□□□ 1.29
NDUFS3-212ENST00000534208 CNNM2Q9H8M5 875 aa23.14■■□□□ 1.29
NDUFS3-212ENST00000534208 ZSWIM5Q9P217 1185 aa23.14■■□□□ 1.29
NDUFS3-212ENST00000534208 ASPRV1Q53RT3 343 aa23.13■■□□□ 1.29
NDUFS3-212ENST00000534208 CDX2Q99626 313 aaPredicted RBP23.13■■□□□ 1.29
NDUFS3-212ENST00000534208 UBA5Q9GZZ9 404 aa23.13■■□□□ 1.29
NDUFS3-212ENST00000534208 CPVLQ9H3G5 476 aa23.13■■□□□ 1.29
NDUFS3-212ENST00000534208 TNKSO95271 1327 aa23.12■■□□□ 1.29
NDUFS3-212ENST00000534208 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.12■■□□□ 1.29
NDUFS3-212ENST00000534208 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.12■■□□□ 1.29
NDUFS3-212ENST00000534208 CSF2RAP15509 400 aa23.12■■□□□ 1.29
NDUFS3-212ENST00000534208 PDE4AP27815 886 aa23.12■■□□□ 1.29
NDUFS3-212ENST00000534208 PDE4DQ08499 809 aa23.12■■□□□ 1.29
NDUFS3-212ENST00000534208 CDC37Q16543 378 aaPredicted RBP23.12■■□□□ 1.29
NDUFS3-212ENST00000534208 TTC22Q5TAA0 569 aa23.12■■□□□ 1.29
NDUFS3-212ENST00000534208 RASIP1Q5U651 963 aa23.12■■□□□ 1.29
NDUFS3-212ENST00000534208 PPP1R12CQ9BZL4 782 aa23.12■■□□□ 1.29
NDUFS3-212ENST00000534208 IL25Q9H293 177 aa23.12■■□□□ 1.29
NDUFS3-212ENST00000534208 ABCB11O95342 1321 aa23.11■■□□□ 1.29
NDUFS3-212ENST00000534208 RAD50Q92878 1312 aa23.11■■□□□ 1.29
NDUFS3-212ENST00000534208 B4DLN1 442 aa23.11■■□□□ 1.29
NDUFS3-212ENST00000534208 NKRFO15226 690 aaKnown RBP eCLIP23.11■■□□□ 1.29
NDUFS3-212ENST00000534208 GSPT1P15170 499 aaKnown RBP23.11■■□□□ 1.29
NDUFS3-212ENST00000534208 CPT1AP50416 773 aa23.11■■□□□ 1.29
NDUFS3-212ENST00000534208 MRPL12P52815 198 aaKnown RBP23.11■■□□□ 1.29
NDUFS3-212ENST00000534208 USH1GQ495M9 461 aa23.11■■□□□ 1.29
NDUFS3-212ENST00000534208 TMEM240Q5SV17 173 aa23.11■■□□□ 1.29
NDUFS3-212ENST00000534208 ADGRF4Q8IZF3 695 aa23.11■■□□□ 1.29
NDUFS3-212ENST00000534208 SCFD2Q8WU76 684 aa23.11■■□□□ 1.29
NDUFS3-212ENST00000534208 POLR3EQ9NVU0 708 aa23.11■■□□□ 1.29
NDUFS3-212ENST00000534208 UNC80Q8N2C7 3258 aa23.11■■□□□ 1.29
NDUFS3-212ENST00000534208 DLL1O00548 723 aa23.1■■□□□ 1.29
NDUFS3-212ENST00000534208 PARP1P09874 1014 aaKnown RBP23.1■■□□□ 1.29
NDUFS3-212ENST00000534208 PSMC6P62333 389 aa23.1■■□□□ 1.29
NDUFS3-212ENST00000534208 PSRC1Q6PGN9 363 aaPredicted RBP23.1■■□□□ 1.29
NDUFS3-212ENST00000534208 UBAC1Q9BSL1 405 aa23.1■■□□□ 1.29
NDUFS3-212ENST00000534208 HIPK3Q9H422 1215 aa23.1■■□□□ 1.29
NDUFS3-212ENST00000534208 CDH23Q9H251 3354 aa23.1■■□□□ 1.29
NDUFS3-212ENST00000534208 CYP2C18P33260 490 aa23.09■■□□□ 1.29
NDUFS3-212ENST00000534208 PURAQ00577 322 aaKnown RBP23.09■■□□□ 1.29
NDUFS3-212ENST00000534208 PPP2R5BQ15173 497 aa23.09■■□□□ 1.29
NDUFS3-212ENST00000534208 NOC4LQ9BVI4 516 aaKnown RBP23.09■■□□□ 1.29
NDUFS3-212ENST00000534208 TRPV6Q9H1D0 765 aa23.09■■□□□ 1.29
NDUFS3-212ENST00000534208 IL23AQ9NPF7 189 aa23.09■■□□□ 1.29
NDUFS3-212ENST00000534208 B4GALT4O60513 344 aa23.08■■□□□ 1.29
NDUFS3-212ENST00000534208 BRDTQ58F21 947 aaPredicted RBP23.08■■□□□ 1.29
NDUFS3-212ENST00000534208 OR6J1Q8NGC5 347 aa23.08■■□□□ 1.29
NDUFS3-212ENST00000534208 ALDH8A1Q9H2A2 487 aaPredicted RBP23.08■■□□□ 1.29
NDUFS3-212ENST00000534208 DNAJB2P25686 324 aa23.07■■□□□ 1.28
NDUFS3-212ENST00000534208 SEC23AQ15436 765 aa23.07■■□□□ 1.28
NDUFS3-212ENST00000534208 QRICH1Q2TAL8 776 aa23.07■■□□□ 1.28
NDUFS3-212ENST00000534208 IFIT1BQ5T764 474 aaKnown RBP23.07■■□□□ 1.28
NDUFS3-212ENST00000534208 ZNF365Q70YC5 407 aa23.07■■□□□ 1.28
NDUFS3-212ENST00000534208 MCF2L2Q86YR7 1114 aa23.07■■□□□ 1.28
NDUFS3-212ENST00000534208 SYTL5Q8TDW5 730 aaPredicted RBP23.07■■□□□ 1.28
NDUFS3-212ENST00000534208 JMJD4Q9H9V9 463 aa23.07■■□□□ 1.28
NDUFS3-212ENST00000534208 SCN10AQ9Y5Y9 1956 aa23.07■■□□□ 1.28
NDUFS3-212ENST00000534208 MYH6P13533 1939 aa23.06■■□□□ 1.28
NDUFS3-212ENST00000534208 A6NJR5 290 aa23.06■■□□□ 1.28
NDUFS3-212ENST00000534208 KPNA6O60684 536 aa23.06■■□□□ 1.28
NDUFS3-212ENST00000534208 ACRP10323 421 aa23.06■■□□□ 1.28
NDUFS3-212ENST00000534208 TTLL4Q14679 1199 aa23.06■■□□□ 1.28
NDUFS3-212ENST00000534208 FBXO11Q86XK2 927 aa23.06■■□□□ 1.28
NDUFS3-212ENST00000534208 NSUN6Q8TEA1 469 aaKnown RBP23.06■■□□□ 1.28
NDUFS3-212ENST00000534208 RUFY2Q8WXA3 655 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms